Information report for AT3G21175
Gene Details
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Functional Descriptions
- PO:0000037 — shoot axis apex — ápice del epiblasto (epiblastema) (Spanish, exact), シュート頂、茎頂 (Japanese, exact)
- PO:0008019 — leaf lamina base — base de la lámina de la hoja (Spanish, exact), 葉身基部 (Japanese, exact)
- PO:0009005 — root — raíz (Spanish, exact), radices (exact, plural), radix (exact), 根 (Japanese, exact), aerial root (narrow), climbing root (narrow)
- PO:0009006 — shoot system — sistema de epiblasto (epiblastema) (Spanish, exact), シュート系、苗条系 (Japanese, exact), Poaceae crown (related), shoot (related), thalli (related), thallus (related), tree crown (narrow)
- PO:0009009 — plant embryo — embrión (Spanish, exact), 植物胚 (Japanese, exact), germ (related), embryo (broad)
- PO:0009025 — vascular leaf — foliage leaf (exact), hoja vascular (Spanish, exact), leaf, vascular (exact), vascular leaves (exact, plural), 維管束のある葉, または維管束植物の葉 (Japanese, exact), crozier (related), macrophyll (related), megaphyll (related), ascidia (narrow), ascidium (narrow), fiddlehead (narrow), frond (narrow), needle-like leaf (narrow), pitcher (narrow), pitcher blade (narrow), pitcher-blade (narrow), scale-like leaf (narrow), sterile frond (narrow), trophophyll (narrow)
- PO:0009029 — stamen — estambre (Spanish, exact), 雄蕊 (Japanese, exact), Poaceae stamen (narrow), Zea stamen (narrow)
- PO:0009031 — sepal — sépalo (Spanish, exact), がく片 (Japanese, exact)
- PO:0009046 — flower — flor (Spanish, exact), 花 (Japanese, exact), floret (related), Asteraceae floret (narrow), basal flower (narrow), double flower (narrow), hermaphrodite flower (narrow), monoclinous flower (narrow), perfect flower (narrow)
- PO:0009052 — inflorescence flower pedicel — 小花柄 (Japanese, related), pedicelo (Spanish, broad)
- PO:0020030 — cotyledon — cotiledón (Spanish, exact), seed leaf (exact), 子葉 (Japanese, exact)
- PO:0020038 — petiole — pecíolo (Spanish, exact), 葉柄 (Japanese, exact)
- PO:0020100 — hypocotyl — hipocótile (Spanish, exact), 胚軸 (Japanese, exact)
- PO:0020137 — leaf apex — ápice de la hoja (Spanish, exact), 葉先 (Japanese, exact), leaf lamina apex (narrow), phyllid apex (narrow)
- PO:0025022 — collective leaf structure — estructura colectiva de hoja (Spanish, exact), leaf series (exact), 葉が集まった構造 (Japanese, exact), leaf whorl (narrow), rosette (narrow), cycle (broad), verticil (broad)
- PO:0025281 — pollen — polen (Spanish, exact), pollen grain (exact), 花粉 (Japanese, exact)
- PO:0025195 — pollen tube cell — célula del tubo polínico (Spanish, exact), 花粉管細胞 (Japanese, exact)
Functional Keywords
Literature and News
- Full-length messenger RNA sequences greatly improve genome annotation. DOI: 10.1186/gb-2002-3-6-research0029 ; PMID: 12093376
- Interaction of a GATA factor with cis-acting elements involved in light regulation of nuclear genes encoding chloroplast glyceraldehyde-3-phosphate dehydrogenase in Arabidopsis. DOI: 10.1016/s0006-291x(02)02892-9 ; PMID: 12504119
- Characterization of Arabidopsis ZIM, a member of a novel plant-specific GATA factor gene family. DOI: 10.1093/jxb/erh078 ; PMID: 14966217
- The GATA family of transcription factors in Arabidopsis and rice. DOI: 10.1104/pp.103.037788 ; PMID: 15084732
- Conservation, convergence, and divergence of light-responsive, circadian-regulated, and tissue-specific expression patterns during evolution of the Arabidopsis GATA gene family. DOI: 10.1104/pp.106.090761 ; PMID: 17208962
- The tify family previously known as ZIM. DOI: 10.1016/j.tplants.2007.04.004 ; PMID: 17499004
- Transcriptome analyses show changes in gene expression to accompany pollen germination and tube growth in Arabidopsis. DOI: 10.1104/pp.108.126375 ; PMID: 18775970
- An Arabidopsis gene regulatory network for secondary cell wall synthesis. DOI: 10.1038/nature14099 ; PMID: 25533953
- Establishment of Expression in the SHORTROOT-SCARECROW Transcriptional Cascade through Opposing Activities of Both Activators and Repressors. DOI: 10.1016/j.devcel.2016.09.031 ; PMID: 27923776
- Transcriptional regulation of nitrogen-associated metabolism and growth. DOI: 10.1038/s41586-018-0656-3 ; PMID: 30356219
- A PXY-Mediated Transcriptional Network Integrates Signaling Mechanisms to Control Vascular Development in Arabidopsis. DOI: 10.1105/tpc.19.00562 ; PMID: 31806676
- A Molecular Signal Integration Network Underpinning Arabidopsis Seed Germination. DOI: 10.1016/j.cub.2020.07.012 ; PMID: 32763174
- The tify family previously known as ZIM. DOI: 10.1016/j.tplants.2007.04.004 ; PMID: 17499004
- The tify family previously known as ZIM. DOI: 10.1016/j.tplants.2007.04.004 ; PMID: 17499004
Gene Resources
- UniProt: B3H4L8
- EMBL: CP002686
- AlphaFoldDB: B3H4L8
- EnsemblPlants: AT3G21175.3
- Gramene: AT3G21175.3
Homologs
- Brassica napus GSBRNA2T00095845001, BnA5.ZML1, GSBRNA2T00009234001
- Brassica oleracea XP_013638694.1, XP_013638693.1
- Brassica rapa XP_009145513.1
Sequences
cDNA Sequence
- >AT3G21175.2
CATTAGACCAAAAAAGAAAAAAAAAATCAAAGGAGCTTCCTTTTTTCGCTCTCGTCTCCGTTTACCCTTTTGGGATTTTTCCCTAAACCTTTTTCTCTCTTTGTATAATCAAATCCTCTTTATCTTTCATTGTTTCGCGTGAATTAGCTCTGCAAAGGCTCTTCATTCTTCTCGCTTGGATTCCTCTGCACAAAAGAAAAAAGACCATGGATGATCTTCATGGAAGAAATGGTCGAATGCACATTGGTGTAGCGCAAAATCCAATGCATGTGCAGTATGAAGATCACGGTTTGCACCATATCGACAATGAAAACAGTATGATGGATGACCATGCTGATGGTGGGATGGATGAAGGAGTGGAGACAGACATTCCTTCTCACCCTGGAAACTCAGCTGATAATCGTGGTGAAGTTGTAGACCGTGGAATTGAAAATGGAGATCAATTGACATTGTCCTTCCAGGGACAAGTTTATGTTTTTGACCGTGTCTCGCCTGAGAAGGTTCAAGCTGTGCTTTTGTTACTTGGTGGAAGGGAAGTACCACATACACTCCCAACAACCCTAGGATCACCTCATCAGAACAATAGGGGTCTATCTGGTACTCCTCAACGGCTTAGCGTTCCGCAGCGGTTAGCTTCTTTGCTCAGGTTTAGGGAGAAACGAAAAGGGAGGAACTTTGATAAGACTATTCGCTATACAGTCAGGAAAGAAGTAGCCTTGAGAATGCAGCGTAAGAAAGGTCAGTTCACGTCGGCTAAATCAAGCAATGATGATTCTGGATCCACTGGATCGGATTGGGGGTCAAACCAGAGCTGGGCCGTAGAAGGGACTGAGACTCAGAAGCCAGAGGTTTTATGTCGACACTGTGGAACAAGTGAGAAGTCAACTCCAATGATGCGACGTGGACCTGATGGGCCAAGAACACTTTGTAATGCGTGTGGACTGATGTGGGCAAACAAGGGGACTCTTAGAGACCTATCCAAAGTCCCTCCTCCGCAAACACCTCAGCATCTATCTCTGAATAAGAATGAGGACGCAAATCTTGAGGCTGATCAAATGATGGAAGTAACTGGTGACATTAGCAACACACAGTGAGAACTGAGAAACCATTGGAAGCAAGAAAGGATCTCAAACAAAAACAGTTGTTATCATTTCATTTGATGATGGAATCGAATCTGAGTTGTGTTTAGGGTTTCTCTGGGTTAATCTCAGTCTATGTGGGCACATTTTAGTCTTCTACAAATTATAAGACACTCTTCACTTATTTAGAAGCTCACTCATCAGAAAAGAAAAAAAAAACTTTGCTCAGTCTCTCATCTGTGTGTTTGATTATATTTTCAGGCAGAAAACTTTTTTTTGTTCTTGTATTTGATTACAATTAGTTAAATATTTAAGACTTAGTAGAGATAATGCAATCTATGTATAAAAATAGAAACAATGATTGGTTATGTCGTGCAACCCAAGTGACCTTAATGTCGTACACACG - >AT3G21175.3
CATTAGACCAAAAAAGAAAAAAAAAATCAAAGGAGCTTCCTTTTTTCGCTCTCGTCTCCGTTTACCCTTTTGGGATTTTTCCCTAAACCTTTTTCTCTCTTTGTATAATCAAATCCTCTTTATCTTTCATTGTTTCGCGTGAATTAGCTCTGCAAAGGCTCTTCATTCTTCTCGCTTGGATTCCTCTGCACAAAAGAAAAAAGACCATGGATGATCTTCATGGAAGAAATGGTCGAATGCACATTGGTGTAGCGCAAAATCCAATGCATGTGCAGTATGAAGATCACGGTTTGCACCATATCGACAATGAAAACAGTATGATGGATGACCATGCTGATGGTGGGATGGATGAAGGAGTGGAGACAGACATTCCTTCTCACCCTGGAAACTCAGCTGATAATCGTGGTGAAGTTGTAGACCGTGGAATTGAAAATGGAGATCAATTGACATTGTCCTTCCAGGGACAAGTTTATGTTTTTGACCGTGTCTCGCCTGAGAAGGTTCAAGCTGTGCTTTTGTTACTTGGTGGAAGGGAAGTACCACATACACTCCCAACAACCCTAGGATCACCTCATCAGAACAATAGGGGTCTATCTGGTACTCCTCAACGGCTTAGCGTTCCGCAGCGGTTAGCTTCTTTGCTCAGGTTTAGGGAGAAACGAAAAGGGAGGAACTTTGATAAGACTATTCGCTATACAGTCAGGAAAGAAGTAGCCTTGAGAATGCAGCGTAAGAAAGGTCAGTTCACGTCGGCTAAATCAAGCAATGATGATTCTGGATCCACTGGATCGGATTGGGGGTCAAACCAGAGCTGGGCCGTAGAAGGGACTGAGACTCAGAAGCCAGAGGTTTTATGTCGACACTGTGGAACAAGTGAGAAGTCAACTCCAATGATGCGACGTGGACCTGATGGGCCAAGAACACTTTGTAATGCGTGTGGACTGATGTGGGCAAACAAGGGGACTCTTAGAGACCTATCCAAAGTCCCTCCTCCGCAAACACCTCAGCATCTATCTCTGAATAAGAATGAGGACGCAAATCTTGAGGCTGATCAAATGATGGAAGTAACTGGTGACATTAGCAACACACAGTGAGAACTGAGAAACCATTGGAAGCAAGAAAGGATCTCAAACAAAAACAGTTGTTATCATTTCATTTGATGATGGAATCGAATCTGAGTTGTGTTTAGGGTTTCTCTGGGTTAATCTCAGTCTATGTGGGCACATTTTAGTCTTCTACAAATTATAAGACACTCTTCACTTATTTAGAAGCTCACTCATCAGAAAAGAAAAAAAAAACTTTGCTCAGTCTCTCATCTGTGTGTTTGATTATATTTTCAGGCAGAAAACTTTTTTTTGTTCTTGTATTTGATTACAATTAGTTAAATATTTAAGACTTAGTAGAGATAATGCAATCTATGTATAAAAATAGAAACAATGATTGGTTATGTCGTGCAACCCAAGTGACCTTAATGTCGTACACACG - >AT3G21175.1
CATTAGACCAAAAAAGAAAAAAAAAATCAAAGGAGCTTCCTTTTTTCGCTCTCGTCTCCGTTTACCCTTTTGGGATTTTTCCCTAAACCTTTTTCTCTCTTTGTATAATCAAATCCTCTTTATCTTTCATTGTTTCGCGTGAATTAGCTCTGCAAAGGCTCTTCATTCTTCTCGCTTGGATTCCTCTGCACAAAAGAAAAAAGACCATGGATGATCTTCATGGAAGAAATGGTCGAATGCACATTGGTGTAGCGCAAAATCCAATGCATGTGCAGTATGAAGATCACGGTTTGCACCATATCGACAATGAAAACAGTATGATGGATGACCATGCTGATGGTGGGATGGATGAAGGAGTGGAGACAGACATTCCTTCTCACCCTGGAAACTCAGCTGATAATCGTGGTGAAGTTGTAGACCGTGGAATTGAAAATGGAGATCAATTGACATTGTCCTTCCAGGGACAAGTTTATGTTTTTGACCGTGTCTCGCCTGAGAAGGTTCAAGCTGTGCTTTTGTTACTTGGTGGAAGGGAAGTACCACATACACTCCCAACAACCCTAGGATCACCTCATCAGAACAATAGGGGTCTATCTGGTACTCCTCAACGGCTTAGCGTTCCGCAGCGGTTAGCTTCTTTGCTCAGGTTTAGGGAGAAACGAAAAGGGAGGAACTTTGATAAGACTATTCGCTATACAGTCAGGAAAGAAGTAGCCTTGAGAATGCAGCGTAAGAAAGGTCAGTTCACGTCGGCTAAATCAAGCAATGATGATTCTGGATCCACTGGATCGGATTGGGGGTCAAACCAGAGCTGGGCCGTAGAAGGGACTGAGACTCAGAAGCCAGAGGTTTTATGTCGACACTGTGGAACAAGTGAGAAGTCAACTCCAATGATGCGACGTGGACCTGATGGGCCAAGAACACTTTGTAATGCGTGTGGACTGATGTGGGCAAACAAGGGGACTCTTAGAGACCTATCCAAAGTCCCTCCTCCGCAAACACCTCAGCATCTATCTCTGAATAAGAATGAGGACGCAAATCTTGAGGCTGATCAAATGATGGAAGTAACTGGTGACATTAGCAACACACAGTGAGAACTGAGAAACCATTGGAAGCAAGAAAGGATCTCAAACAAAAACAGTTGTTATCATTTCATTTGATGATGGAATCGAATCTGAGTTGTGTTTAGGGTTTCTCTGGGTTAATCTCAGTCTATGTGGGCACATTTTAGTCTTCTACAAATTATAAGACACTCTTCACTTATTTAGAAGCTCACTCATCAGAAAAGAAAAAAAAAACTTTGCTCAGTCTCTCATCTGTGTGTTTGATTATATTTTCAGGCAGAAAACTTTTTTTTGTTCTTGTATTTGATTACAATTAGTTAAATATTTAAGACTTAGTAGAGATAATGCAATCTATGTATAAAAATAGAAACAATGATTGGTTATGTCGTGCAACCCAAGTGACCTTAATGTCGTACACACG
CDS Sequence
- >AT3G21175.2
ATGGATGATCTTCATGGAAGAAATGGTCGAATGCACATTGGTGTAGCGCAAAATCCAATGCATGTGCAGTATGAAGATCACGGTTTGCACCATATCGACAATGAAAACAGTATGATGGATGACCATGCTGATGGTGGGATGGATGAAGGAGTGGAGACAGACATTCCTTCTCACCCTGGAAACTCAGCTGATAATCGTGGTGAAGTTGTAGACCGTGGAATTGAAAATGGAGATCAATTGACATTGTCCTTCCAGGGACAAGTTTATGTTTTTGACCGTGTCTCGCCTGAGAAGGTTCAAGCTGTGCTTTTGTTACTTGGTGGAAGGGAAGTACCACATACACTCCCAACAACCCTAGGATCACCTCATCAGAACAATAGGGGTCTATCTGGTACTCCTCAACGGCTTAGCGTTCCGCAGCGGTTAGCTTCTTTGCTCAGGTTTAGGGAGAAACGAAAAGGGAGGAACTTTGATAAGACTATTCGCTATACAGTCAGGAAAGAAGTAGCCTTGAGAATGCAGCGTAAGAAAGGTCAGTTCACGTCGGCTAAATCAAGCAATGATGATTCTGGATCCACTGGATCGGATTGGGGGTCAAACCAGAGCTGGGCCGTAGAAGGGACTGAGACTCAGAAGCCAGAGGTTTTATGTCGACACTGTGGAACAAGTGAGAAGTCAACTCCAATGATGCGACGTGGACCTGATGGGCCAAGAACACTTTGTAATGCGTGTGGACTGATGTGGGCAAACAAGGGGACTCTTAGAGACCTATCCAAAGTCCCTCCTCCGCAAACACCTCAGCATCTATCTCTGAATAAGAATGAGGACGCAAATCTTGAGGCTGATCAAATGATGGAAGTAACTGGTGACATTAGCAACACACAGTGA - >AT3G21175.3
ATGGATGATCTTCATGGAAGAAATGGTCGAATGCACATTGGTGTAGCGCAAAATCCAATGCATGTGCAGTATGAAGATCACGGTTTGCACCATATCGACAATGAAAACAGTATGATGGATGACCATGCTGATGGTGGGATGGATGAAGGAGTGGAGACAGACATTCCTTCTCACCCTGGAAACTCAGCTGATAATCGTGGTGAAGTTGTAGACCGTGGAATTGAAAATGGAGATCAATTGACATTGTCCTTCCAGGGACAAGTTTATGTTTTTGACCGTGTCTCGCCTGAGAAGGTTCAAGCTGTGCTTTTGTTACTTGGTGGAAGGGAAGTACCACATACACTCCCAACAACCCTAGGATCACCTCATCAGAACAATAGGGGTCTATCTGGTACTCCTCAACGGCTTAGCGTTCCGCAGCGGTTAGCTTCTTTGCTCAGGTTTAGGGAGAAACGAAAAGGGAGGAACTTTGATAAGACTATTCGCTATACAGTCAGGAAAGAAGTAGCCTTGAGAATGCAGCGTAAGAAAGGTCAGTTCACGTCGGCTAAATCAAGCAATGATGATTCTGGATCCACTGGATCGGATTGGGGGTCAAACCAGAGCTGGGCCGTAGAAGGGACTGAGACTCAGAAGCCAGAGGTTTTATGTCGACACTGTGGAACAAGTGAGAAGTCAACTCCAATGATGCGACGTGGACCTGATGGGCCAAGAACACTTTGTAATGCGTGTGGACTGATGTGGGCAAACAAGGGGACTCTTAGAGACCTATCCAAAGTCCCTCCTCCGCAAACACCTCAGCATCTATCTCTGAATAAGAATGAGGACGCAAATCTTGAGGCTGATCAAATGATGGAAGTAACTGGTGACATTAGCAACACACAGTGA - >AT3G21175.1
ATGGATGATCTTCATGGAAGAAATGGTCGAATGCACATTGGTGTAGCGCAAAATCCAATGCATGTGCAGTATGAAGATCACGGTTTGCACCATATCGACAATGAAAACAGTATGATGGATGACCATGCTGATGGTGGGATGGATGAAGGAGTGGAGACAGACATTCCTTCTCACCCTGGAAACTCAGCTGATAATCGTGGTGAAGTTGTAGACCGTGGAATTGAAAATGGAGATCAATTGACATTGTCCTTCCAGGGACAAGTTTATGTTTTTGACCGTGTCTCGCCTGAGAAGGTTCAAGCTGTGCTTTTGTTACTTGGTGGAAGGGAAGTACCACATACACTCCCAACAACCCTAGGATCACCTCATCAGAACAATAGGGGTCTATCTGGTACTCCTCAACGGCTTAGCGTTCCGCAGCGGTTAGCTTCTTTGCTCAGGTTTAGGGAGAAACGAAAAGGGAGGAACTTTGATAAGACTATTCGCTATACAGTCAGGAAAGAAGTAGCCTTGAGAATGCAGCGTAAGAAAGGTCAGTTCACGTCGGCTAAATCAAGCAATGATGATTCTGGATCCACTGGATCGGATTGGGGGTCAAACCAGAGCTGGGCCGTAGAAGGGACTGAGACTCAGAAGCCAGAGGTTTTATGTCGACACTGTGGAACAAGTGAGAAGTCAACTCCAATGATGCGACGTGGACCTGATGGGCCAAGAACACTTTGTAATGCGTGTGGACTGATGTGGGCAAACAAGGGGACTCTTAGAGACCTATCCAAAGTCCCTCCTCCGCAAACACCTCAGCATCTATCTCTGAATAAGAATGAGGACGCAAATCTTGAGGCTGATCAAATGATGGAAGTAACTGGTGACATTAGCAACACACAGTGA
Protein Sequence
- >AT3G21175.2
MDDLHGRNGRMHIGVAQNPMHVQYEDHGLHHIDNENSMMDDHADGGMDEGVETDIPSHPGNSADNRGEVVDRGIENGDQLTLSFQGQVYVFDRVSPEKVQAVLLLLGGREVPHTLPTTLGSPHQNNRGLSGTPQRLSVPQRLASLLRFREKRKGRNFDKTIRYTVRKEVALRMQRKKGQFTSAKSSNDDSGSTGSDWGSNQSWAVEGTETQKPEVLCRHCGTSEKSTPMMRRGPDGPRTLCNACGLMWANKGTLRDLSKVPPPQTPQHLSLNKNEDANLEADQMMEVTGDISNTQ - >AT3G21175.3
MDDLHGRNGRMHIGVAQNPMHVQYEDHGLHHIDNENSMMDDHADGGMDEGVETDIPSHPGNSADNRGEVVDRGIENGDQLTLSFQGQVYVFDRVSPEKVQAVLLLLGGREVPHTLPTTLGSPHQNNRGLSGTPQRLSVPQRLASLLRFREKRKGRNFDKTIRYTVRKEVALRMQRKKGQFTSAKSSNDDSGSTGSDWGSNQSWAVEGTETQKPEVLCRHCGTSEKSTPMMRRGPDGPRTLCNACGLMWANKGTLRDLSKVPPPQTPQHLSLNKNEDANLEADQMMEVTGDISNTQ - >AT3G21175.1
MDDLHGRNGRMHIGVAQNPMHVQYEDHGLHHIDNENSMMDDHADGGMDEGVETDIPSHPGNSADNRGEVVDRGIENGDQLTLSFQGQVYVFDRVSPEKVQAVLLLLGGREVPHTLPTTLGSPHQNNRGLSGTPQRLSVPQRLASLLRFREKRKGRNFDKTIRYTVRKEVALRMQRKKGQFTSAKSSNDDSGSTGSDWGSNQSWAVEGTETQKPEVLCRHCGTSEKSTPMMRRGPDGPRTLCNACGLMWANKGTLRDLSKVPPPQTPQHLSLNKNEDANLEADQMMEVTGDISNTQ