Information report for AT3G21150
Gene Details
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Functional Descriptions
- SALK_059534 (homo) — Under FRc conditions, the length mutant hypocotyls is similar to that of wild-type plants. Under Rc conditions, the hypocotyl length is decreased and the cotyledon area is smaller.
Functional Keywords
Literature and News
- Arabidopsis transcription factors: genome-wide comparative analysis among eukaryotes. DOI: 10.1126/science.290.5499.2105 ; PMID: 11118137
- 12-oxo-phytodienoic acid triggers expression of a distinct set of genes and plays a role in wound-induced gene expression in Arabidopsis. DOI: 10.1104/pp.105.067058 ; PMID: 16258017
- Functional profiling reveals that only a small number of phytochrome-regulated early-response genes in Arabidopsis are necessary for optimal deetiolation. DOI: 10.1105/tpc.106.042200 ; PMID: 16891401
- Identification of 118 Arabidopsis transcription factor and 30 ubiquitin-ligase genes responding to chitin, a plant-defense elicitor. DOI: 10.1094/MPMI-20-8-0900 ; PMID: 17722694
- The Arabidopsis B-box zinc finger family. DOI: 10.1105/tpc.109.069088 ; PMID: 19920209
- BBX32, an Arabidopsis B-Box protein, functions in light signaling by suppressing HY5-regulated gene expression and interacting with STH2/BBX21. DOI: 10.1104/pp.111.177139 ; PMID: 21632973
- EMF1 interacts with EIP1, EIP6 or EIP9 involved in the regulation of flowering time in Arabidopsis. DOI: 10.1093/pcp/pcr084 ; PMID: 21700722
- Four distinct types of dehydration stress memory genes in Arabidopsis thaliana. DOI: 10.1186/1471-2229-13-229 ; PMID: 24377444
- Arabidopsis B-BOX32 interacts with CONSTANS-LIKE3 to regulate flowering. DOI: 10.1073/pnas.1616459114 ; PMID: 27999181
- Bioinformatics analysis of BBX family genes and its response to UV-B in Arabidopsis thaliana. DOI: 10.1080/15592324.2020.1782647 ; PMID: 32552524
- B-box protein BBX32 integrates light and brassinosteroid signals to inhibit cotyledon opening. DOI: 10.1093/plphys/kiab304 ; PMID: 34618149
- Arabidopsis transcription factors: genome-wide comparative analysis among eukaryotes. DOI: 10.1126/science.290.5499.2105 ; PMID: 11118137
- Identification of 118 Arabidopsis transcription factor and 30 ubiquitin-ligase genes responding to chitin, a plant-defense elicitor. DOI: 10.1094/MPMI-20-8-0900 ; PMID: 17722694
Gene Resources
- UniProt: A0A178V704
- EMBL: LUHQ01000003
- AlphaFoldDB: A0A178V704
- EnsemblPlants: AT3G21150.1
- Gramene: AT3G21150.1
- KEGG: ath:AT3G21150
- Orthologous matrix: HFRRRIC
- ExpressionAtlas: AT3G21150
- InterPro: IPR000315, IPR049808
- PANTHER: PTHR31717, PTHR31717:SF115
- SWISS-MODEL: A0A178V704
- Conserved Domain Database: cd19821
Homologs
- Beta vulgaris BVRB_7g177600
- Brassica napus BnaC05G0373600ZS, BnaA05G0346400ZS, BnaA03G0366000ZS, BnaC03G0446600ZS
- Brassica oleracea Bo5g103590, Bo3g077370
- Brassica rapa Bra031255, Bra001815
- Juglans regia Jr07_10430
- Malus domestica MdBBX37
- Populus trichocarpa POPTR_010G251800v3, POPTR_008G007000v3
- Prunus persica PRUPE_3G020100
- Rosa chinensis RchiOBHm_Chr2g0149701
- Solanum lycopersicum Solyc06g063280.1
- Solanum tuberosum PGSC0003DMG400026515
- Vitis vinifera VIT_09s0054g00530
Sequences
cDNA Sequence
- >AT3G21150.1
GTCACACCAAAAGGAAGACGAATGACTTGGCGGCTAGTGTAATAGTTTTAAAAATGACCACATAATCTCACCAGCCTCAAAACCTCACGACACGTCATTCTCTCCAATTCTACAAACACCATTCATTTCATTTCCCTAAAAAATTATGGCTCATGTAAGTTTCTTTGATGTGTGAACTGTGGAAGAGACTACTCTCATCAACCATGAACCATAAAAACTCCACCGCTCTTTCTCTCCCTCAATCATTTACATCTCTTCCTTAAATCTCTCTTCCCACCATCATCATTCCAAACCAATTCTCTCTCACTTCTTTCTGGTGATCAGAGAGATCGACTCAATGGTGAGCTTTTGCGAGCTTTGTGGTGCCGAAGCTGATCTCCATTGTGCCGCGGACTCTGCCTTCCTCTGCCGTTCTTGTGACGCTAAGTTCCATGCCTCAAATTTTCTCTTCGCTCGTCATTTCCGGCGTGTCATCTGCCCAAATTGCAAATCTCTTACTCAAAATTTCGTTTCTGGTCCTCTTCTTCCTTGGCCTCCACGAACAACATGTTGTTCAGAATCGTCGTCTTCTTCTTGCTGCTCGTCTCTTGACTGTGTCTCAAGCTCCGAGCTATCGTCAACGACGCGTGACGTAAACAGAGCGCGAGGGAGGGAAAACAGAGTGAATGCCAAGGCCGTTGCGGTTACGGTGGCGGATGGCATTTTTGTAAATTGGTGTGGTAAGTTAGGACTAAACAGGGATTTAACAAACGCTGTCGTTTCATATGCGTCTTTGGCTTTGGCTGTGGAGACGAGGCCAAGAGCGACGAAGAGAGTGTTCTTAGCGGCGGCGTTTTGGTTCGGCGTTAAGAACACGACGACGTGGCAGAATTTAAAGAAAGTAGAAGATGTGACTGGAGTTTCAGCTGGGATGATTCGAGCGGTTGAAAGCAAATTGGCGCGTGCAATGACGCAGCAGCTTAGACGGTGGCGCGTGGATTCGGAGGAAGGATGGGCTGAAAACGACAACGTTTGAGAAATATTATTGACATGGGTCCCGCATTATGCAAATTAGGACATTTAGTGTTTAGTGCCTTAATTATAGTTTGTGTCATTGATCTGTTTGATCTTTCTTTTCAACGTAAACTAAAAATGGTCTGAACCAATTGAGATGATAGATATTTCTTTAGAGGAGATTTAATTTTTTTAATCAACAGTAAGAAGATTTTAGAAACGGAATAATGGTAATCCAATAGTCATTATCAGGTTCTTTTGAGATGAAATTGAAATCTTTTCTTTCCCAA
CDS Sequence
- >AT3G21150.1
ATGGTGAGCTTTTGCGAGCTTTGTGGTGCCGAAGCTGATCTCCATTGTGCCGCGGACTCTGCCTTCCTCTGCCGTTCTTGTGACGCTAAGTTCCATGCCTCAAATTTTCTCTTCGCTCGTCATTTCCGGCGTGTCATCTGCCCAAATTGCAAATCTCTTACTCAAAATTTCGTTTCTGGTCCTCTTCTTCCTTGGCCTCCACGAACAACATGTTGTTCAGAATCGTCGTCTTCTTCTTGCTGCTCGTCTCTTGACTGTGTCTCAAGCTCCGAGCTATCGTCAACGACGCGTGACGTAAACAGAGCGCGAGGGAGGGAAAACAGAGTGAATGCCAAGGCCGTTGCGGTTACGGTGGCGGATGGCATTTTTGTAAATTGGTGTGGTAAGTTAGGACTAAACAGGGATTTAACAAACGCTGTCGTTTCATATGCGTCTTTGGCTTTGGCTGTGGAGACGAGGCCAAGAGCGACGAAGAGAGTGTTCTTAGCGGCGGCGTTTTGGTTCGGCGTTAAGAACACGACGACGTGGCAGAATTTAAAGAAAGTAGAAGATGTGACTGGAGTTTCAGCTGGGATGATTCGAGCGGTTGAAAGCAAATTGGCGCGTGCAATGACGCAGCAGCTTAGACGGTGGCGCGTGGATTCGGAGGAAGGATGGGCTGAAAACGACAACGTTTGA
Protein Sequence
- >AT3G21150.1
MVSFCELCGAEADLHCAADSAFLCRSCDAKFHASNFLFARHFRRVICPNCKSLTQNFVSGPLLPWPPRTTCCSESSSSSCCSSLDCVSSSELSSTTRDVNRARGRENRVNAKAVAVTVADGIFVNWCGKLGLNRDLTNAVVSYASLALAVETRPRATKRVFLAAAFWFGVKNTTTWQNLKKVEDVTGVSAGMIRAVESKLARAMTQQLRRWRVDSEEGWAENDNV