Information report for AT3G20930
Gene Details
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Functional Descriptions
Functional Keywords
Literature and News
- Inactivation of the chloroplast ATP synthase gamma subunit results in high non-photochemical fluorescence quenching and altered nuclear gene expression in Arabidopsis thaliana. DOI: 10.1074/jbc.M308435200 ; PMID: 14576160
- AtNAC2, a transcription factor downstream of ethylene and auxin signaling pathways, is involved in salt stress response and lateral root development. DOI: 10.1111/j.1365-313X.2005.02575.x ; PMID: 16359384
- Two RNA recognition motif-containing proteins are plant mitochondrial editing factors. DOI: 10.1093/nar/gkv245 ; PMID: 25800738
- A zinc finger motif-containing protein is essential for chloroplast RNA editing. DOI: 10.1371/journal.pgen.1005028 ; PMID: 25768119
- Organelle RNA recognition motif-containing (ORRM) proteins are plastid and mitochondrial editing factors in Arabidopsis. DOI: 10.1080/15592324.2016.1167299 ; PMID: 27082488
- Chloroplast RNA-Binding Protein RBD1 Promotes Chilling Tolerance through 23S rRNA Processing in Arabidopsis. DOI: 10.1371/journal.pgen.1006027 ; PMID: 27138552
- An Organelle RNA Recognition Motif Protein Is Required for Photosystem II Subunit psbF Transcript Editing. DOI: 10.1104/pp.16.01623 ; PMID: 28213559
- Stable native RIP9 complexes associate with C-to-U RNA editing activity, PPRs, RIPs, OZ1, ORRM1 and ISE2. DOI: 10.1111/tpj.14384 ; PMID: 31077462
- Two organelle RNA recognition motif proteins affect distinct sets of RNA editing sites in the Arabidopsis thaliana plastid. DOI: 10.1002/pld3.213 ; PMID: 32259001
- Discovering the RNA-Binding Proteome of Plant Leaves with an Improved RNA Interactome Capture Method. DOI: 10.3390/biom10040661 ; PMID: 32344669
- The RanBP2 zinc finger domains of chloroplast RNA editing factor OZ1 are required for protein-protein interactions and conversion of C to U. DOI: 10.1111/tpj.15569 ; PMID: 34743362
- The RNA-recognition motif in chloroplasts. DOI: 10.1016/j.jplph.2011.01.012 ; PMID: 21330002
Gene Resources
- UniProt: A0A1I9LPX6
- EMBL: CP002686
- AlphaFoldDB: A0A1I9LPX6
- EnsemblPlants: AT3G20930.2
- Gramene: AT3G20930.2
- ExpressionAtlas: AT3G20930
- InterPro: IPR000504, IPR012677, IPR035979
- PANTHER: PTHR31346, PTHR31346:SF11
- SUPFAM: SSF54928
- PROSITE: PS50102
- Gene3D: 3.30.70.330, 3.30.70.80
- OrthoDB: A0A1I9LPX6
- SWISS-MODEL: A0A1I9LPX6
Homologs
- Brachypodium distachyon BRADI_4g00870v3
- Oryza sativa WSP1, LOC_Os12g43600, Osgr-rbp4;Osgrp1
- Saccharum spontaneum Sspon.02G0045790-3D
- Zea mays GRMZM2G080603
Sequences
cDNA Sequence
- >AT3G20930.2
AACAAAGCAAGCAAAAAAGAGTTGCCATGGAAGCTCTTATTGCTTCCACTTCCTTCTTCGTCCCCATCTCCAACTCTTCCTCCTCACACATTATCAATAACAGATTCTTCCCTTCATTTTATTCTCCCAACTTAAATTTCGGGACTTTTCGGAAAACTTCCTTGTCATCATCACACCTCGTCTTCTCATCTTCTGCAATTTCCGCACCGCCTTCTTCTACTGTTCTTACTCGAAACAGCTATTGGATGGTGTTATTGGATAAACCTCCGCATTGGGTTTCTTCCAAATCAGCCATGGTAGATTATTATGTCGAGATTCTTGCGAAAGTACTGGGAAACGAAAAAGATGCGCAAGTGAGTATATATGATGCTTCCTTTGATACCCATTTCGGGTTTTGTTGTCATATCGACGAAGATGCTTCACGACAGCTCGCTAGTTTACCTGGAGTAGTGTCTATTAGACCTGAACAGGATTACAGTTCAGAGAAGAAGAATTATGGCATTGGTAGCCATAAAGGTGTTTCATTGTTTGATCATGGGACAGTAAAACATTGGATGGTACGAATAGATAAGCCAGGAGTTGGGATTGTTACTAAAGCACAGATGGTTGATCATTGTGTTCAATTGCTATCCAAGGTTTTGTGGAATGAGAAGGATGCACAGATGTGTCTTTATCATGTTTCCTGGCAGTCTGATTTCGGATTTTGTTGTGATCTCGATGAAAGAAGTGCTGTGGAGTTAGCTGGCGTACCTGGTGTTCTTGCTGTTGTTCCTGATAACAGTTTCGAGTCACTAAACAAAGACTATGAAGGCGATAGTACGCAAGATTCAAGAGATCAAGATGATTCAGAGTCTCCTCCCGTAAAGACAAAGAAGCTGTTTATAACTGGACTGTCTTTCTACACATCTGAGAAGACATTACGTGCAGCATTTGAAGGGTTTGGTGAACTAGTGGAAGAACATTCCTCTGCAGTCAAAATAATTATGGACAAAATATCGAAGAGATCAAAGGGCTATGCCTTTCTAGAGTACACGACAGAGGAAGCCGCAGGCACTGCACTAAAAGAGATGAATGGAAAGATTATCAACGGGTGGATGATAGTAGTAGATGTAGCCAAGACCAAACCGTTCAGGCAAAACAGAAGTCAACCAAGTTTCGGGCTCTAGAATCTGAGTGTTAGGGTGATACAACCATGGGGATTTAAGATGCTTCAGGCGAAGAAAGATAAGGCAAGTAGTATCATTTTTCATACTAGATCAAATATAAATTTCACACTATGTGACAGCTCTGCAAAAAAAATTCACATGTACATATCTATATTTGAGTTTACAAGATTTCGGCCGAATGAAAGGCCTACTGATACAAGTATTATATAGTTGTCACCTTGGGGCTTGGGCGATTAACACGCTTAACGAGTAAATAAACTACTACTATTTATTTTTTCAGTGACT - >AT3G20930.1
AACAAAGCAAGCAAAAAAGAGTTGCCATGGAAGCTCTTATTGCTTCCACTTCCTTCTTCGTCCCCATCTCCAACTCTTCCTCCTCACACATTATCAATAACAGATTCTTCCCTTCATTTTATTCTCCCAACTTAAATTTCGGGACTTTTCGGAAAACTTCCTTGTCATCATCACACCTCGTCTTCTCATCTTCTGCAATTTCCGCACCGCCTTCTTCTACTGTTCTTACTCGAAACAGCTATTGGATGGTGTTATTGGATAAACCTCCGCATTGGGTTTCTTCCAAATCAGCCATGGTAGATTATTATGTCGAGATTCTTGCGAAAGTACTGGGAAACGAAAAAGATGCGCAAGTGAGTATATATGATGCTTCCTTTGATACCCATTTCGGGTTTTGTTGTCATATCGACGAAGATGCTTCACGACAGCTCGCTAGTTTACCTGGAGTAGTGTCTATTAGACCTGAACAGGATTACAGTTCAGAGAAGAAGAATTATGGCATTGGTAGCCATAAAGGTGTTTCATTGTTTGATCATGGGACAGTAAAACATTGGATGGTACGAATAGATAAGCCAGGAGTTGGGATTGTTACTAAAGCACAGATGGTTGATCATTGTGTTCAATTGCTATCCAAGGTTTTGTGGAATGAGAAGGATGCACAGATGTGTCTTTATCATGTTTCCTGGCAGTCTGATTTCGGATTTTGTTGTGATCTCGATGAAAGAAGTGCTGTGGAGTTAGCTGGCGTACCTGGTGTTCTTGCTGTTGTTCCTGATAACAGTTTCGAGTCACTAAACAAAGACTATGAAGGCGATAGTACGCAAGATTCAAGAGATCAAGATGATTCAGAGTCTCCTCCCGTAAAGACAAAGAAGCTGTTTATAACTGGACTGTCTTTCTACACATCTGAGAAGACATTACGTGCAGCATTTGAAGGGTTTGGTGAACTAGTGGAAGAACATTCCTCTGCAGTCAAAATAATTATGGACAAAATATCGAAGAGATCAAAGGGCTATGCCTTTCTAGAGTACACGACAGAGGAAGCCGCAGGCACTGCACTAAAAGAGATGAATGGAAAGATTATCAACGGGTGGATGATAGTAGTAGATGTAGCCAAGACCAAACCGTTCAGGCAAAACAGAAGTCAACCAAGTTTCGGGCTCTAGAATCTGAGTGTTAGGGTGATACAACCATGGGGATTTAAGATGCTTCAGGCGAAGAAAGATAAGGCAAGTAGTATCATTTTTCATACTAGATCAAATATAAATTTCACACTATGTGACAGCTCTGCAAAAAAAATTCACATGTACATATCTATATTTGAGTTTACAAGATTTCGGCCGAATGAAAGGCCTACTGATACAAGTATTATATAGTTGTCACCTTGGGGCTTGGGCGATTAACACGCTTAACGAGTAAATAAACTACTACTATTTATTTTTTCAGTGACT
CDS Sequence
- >AT3G20930.2
ATGGAAGCTCTTATTGCTTCCACTTCCTTCTTCGTCCCCATCTCCAACTCTTCCTCCTCACACATTATCAATAACAGATTCTTCCCTTCATTTTATTCTCCCAACTTAAATTTCGGGACTTTTCGGAAAACTTCCTTGTCATCATCACACCTCGTCTTCTCATCTTCTGCAATTTCCGCACCGCCTTCTTCTACTGTTCTTACTCGAAACAGCTATTGGATGGTGTTATTGGATAAACCTCCGCATTGGGTTTCTTCCAAATCAGCCATGGTAGATTATTATGTCGAGATTCTTGCGAAAGTACTGGGAAACGAAAAAGATGCGCAAGTGAGTATATATGATGCTTCCTTTGATACCCATTTCGGGTTTTGTTGTCATATCGACGAAGATGCTTCACGACAGCTCGCTAGTTTACCTGGAGTAGTGTCTATTAGACCTGAACAGGATTACAGTTCAGAGAAGAAGAATTATGGCATTGGTAGCCATAAAGGTGTTTCATTGTTTGATCATGGGACAGTAAAACATTGGATGGTACGAATAGATAAGCCAGGAGTTGGGATTGTTACTAAAGCACAGATGGTTGATCATTGTGTTCAATTGCTATCCAAGGTTTTGTGGAATGAGAAGGATGCACAGATGTGTCTTTATCATGTTTCCTGGCAGTCTGATTTCGGATTTTGTTGTGATCTCGATGAAAGAAGTGCTGTGGAGTTAGCTGGCGTACCTGGTGTTCTTGCTGTTGTTCCTGATAACAGTTTCGAGTCACTAAACAAAGACTATGAAGGCGATAGTACGCAAGATTCAAGAGATCAAGATGATTCAGAGTCTCCTCCCGTAAAGACAAAGAAGCTGTTTATAACTGGACTGTCTTTCTACACATCTGAGAAGACATTACGTGCAGCATTTGAAGGGTTTGGTGAACTAGTGGAAGAACATTCCTCTGCAGTCAAAATAATTATGGACAAAATATCGAAGAGATCAAAGGGCTATGCCTTTCTAGAGTACACGACAGAGGAAGCCGCAGGCACTGCACTAAAAGAGATGAATGGAAAGATTATCAACGGGTGGATGATAGTAGTAGATGTAGCCAAGACCAAACCGTTCAGGCAAAACAGAAGTCAACCAAGTTTCGGGCTCTAG - >AT3G20930.1
ATGGAAGCTCTTATTGCTTCCACTTCCTTCTTCGTCCCCATCTCCAACTCTTCCTCCTCACACATTATCAATAACAGATTCTTCCCTTCATTTTATTCTCCCAACTTAAATTTCGGGACTTTTCGGAAAACTTCCTTGTCATCATCACACCTCGTCTTCTCATCTTCTGCAATTTCCGCACCGCCTTCTTCTACTGTTCTTACTCGAAACAGCTATTGGATGGTGTTATTGGATAAACCTCCGCATTGGGTTTCTTCCAAATCAGCCATGGTAGATTATTATGTCGAGATTCTTGCGAAAGTACTGGGAAACGAAAAAGATGCGCAAGTGAGTATATATGATGCTTCCTTTGATACCCATTTCGGGTTTTGTTGTCATATCGACGAAGATGCTTCACGACAGCTCGCTAGTTTACCTGGAGTAGTGTCTATTAGACCTGAACAGGATTACAGTTCAGAGAAGAAGAATTATGGCATTGGTAGCCATAAAGGTGTTTCATTGTTTGATCATGGGACAGTAAAACATTGGATGGTACGAATAGATAAGCCAGGAGTTGGGATTGTTACTAAAGCACAGATGGTTGATCATTGTGTTCAATTGCTATCCAAGGTTTTGTGGAATGAGAAGGATGCACAGATGTGTCTTTATCATGTTTCCTGGCAGTCTGATTTCGGATTTTGTTGTGATCTCGATGAAAGAAGTGCTGTGGAGTTAGCTGGCGTACCTGGTGTTCTTGCTGTTGTTCCTGATAACAGTTTCGAGTCACTAAACAAAGACTATGAAGGCGATAGTACGCAAGATTCAAGAGATCAAGATGATTCAGAGTCTCCTCCCGTAAAGACAAAGAAGCTGTTTATAACTGGACTGTCTTTCTACACATCTGAGAAGACATTACGTGCAGCATTTGAAGGGTTTGGTGAACTAGTGGAAGAACATTCCTCTGCAGTCAAAATAATTATGGACAAAATATCGAAGAGATCAAAGGGCTATGCCTTTCTAGAGTACACGACAGAGGAAGCCGCAGGCACTGCACTAAAAGAGATGAATGGAAAGATTATCAACGGGTGGATGATAGTAGTAGATGTAGCCAAGACCAAACCGTTCAGGCAAAACAGAAGTCAACCAAGTTTCGGGCTCTAG
Protein Sequence
- >AT3G20930.2
MEALIASTSFFVPISNSSSSHIINNRFFPSFYSPNLNFGTFRKTSLSSSHLVFSSSAISAPPSSTVLTRNSYWMVLLDKPPHWVSSKSAMVDYYVEILAKVLGNEKDAQVSIYDASFDTHFGFCCHIDEDASRQLASLPGVVSIRPEQDYSSEKKNYGIGSHKGVSLFDHGTVKHWMVRIDKPGVGIVTKAQMVDHCVQLLSKVLWNEKDAQMCLYHVSWQSDFGFCCDLDERSAVELAGVPGVLAVVPDNSFESLNKDYEGDSTQDSRDQDDSESPPVKTKKLFITGLSFYTSEKTLRAAFEGFGELVEEHSSAVKIIMDKISKRSKGYAFLEYTTEEAAGTALKEMNGKIINGWMIVVDVAKTKPFRQNRSQPSFGL - >AT3G20930.1
MEALIASTSFFVPISNSSSSHIINNRFFPSFYSPNLNFGTFRKTSLSSSHLVFSSSAISAPPSSTVLTRNSYWMVLLDKPPHWVSSKSAMVDYYVEILAKVLGNEKDAQVSIYDASFDTHFGFCCHIDEDASRQLASLPGVVSIRPEQDYSSEKKNYGIGSHKGVSLFDHGTVKHWMVRIDKPGVGIVTKAQMVDHCVQLLSKVLWNEKDAQMCLYHVSWQSDFGFCCDLDERSAVELAGVPGVLAVVPDNSFESLNKDYEGDSTQDSRDQDDSESPPVKTKKLFITGLSFYTSEKTLRAAFEGFGELVEEHSSAVKIIMDKISKRSKGYAFLEYTTEEAAGTALKEMNGKIINGWMIVVDVAKTKPFRQNRSQPSFGL