Information report for AT3G20880
Gene Details
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Functional Descriptions
- PO:0020149 — quiescent center — centro de division de células del meristema (Spanish, exact), 静止中心 (Japanese, exact)
- PO:0003021 — central root cap of primary root — caliptra de la raíz central de la raíz primaria (Spanish, exact), 一次根の中心根冠 (Japanese, exact)
- nww — Rootless phenotype. nww mutant embryos diverge from normal development at 32 cell stage. The hypophysis asymmetric division fails resulting in loss of lens shaped cell. Consequently the quiescent center does not develop and roots are absent.
Functional Keywords
Literature and News
- Arabidopsis transcription factors: genome-wide comparative analysis among eukaryotes. DOI: 10.1126/science.290.5499.2105 ; PMID: 11118137
- A. thaliana TRANSPARENT TESTA 1 is involved in seed coat development and defines the WIP subfamily of plant zinc finger proteins. DOI: 10.1101/gad.212702 ; PMID: 11782451
- Conservation, diversification and expansion of C2H2 zinc finger proteins in the Arabidopsis thaliana genome. DOI: 10.1186/1471-2164-5-39 ; PMID: 15236668
- Transcriptional profile of the Arabidopsis root quiescent center. DOI: 10.1105/tpc.105.031724 ; PMID: 15937229
- Quantification of transcription factor expression from Arabidopsis images. DOI: 10.1093/bioinformatics/btl228 ; PMID: 16873489
- Global analysis of Arabidopsis gene expression uncovers a complex array of changes impacting pathogen response and cell cycle during geminivirus infection. DOI: 10.1104/pp.108.121038 ; PMID: 18650403
- Weird fingers: functional analysis of WIP domain proteins. DOI: 10.1016/j.febslet.2010.06.007 ; PMID: 20541552
- Plant development. Genetic control of distal stem cell fate within root and embryonic meristems. DOI: 10.1126/science.aaa0196 ; PMID: 25612610
- Expression and Functional Analyses of the WIP Gene Family in Arabidopsis. DOI: 10.3390/plants11152010 ; PMID: 35956487
- Arabidopsis transcription factors: genome-wide comparative analysis among eukaryotes. DOI: 10.1126/science.290.5499.2105 ; PMID: 11118137
- Transcriptional profile of the Arabidopsis root quiescent center. DOI: 10.1105/tpc.105.031724 ; PMID: 15937229
- Transcriptional and posttranscriptional regulation of transcription factor expression in Arabidopsis roots. DOI: 10.1073/pnas.0510607103 ; PMID: 16581911
Gene Resources
Homologs
- Brassica napus GSBRNA2T00022855001, GSBRNA2T00038269001, GSBRNA2T00122356001, GSBRNA2T00021182001
- Brassica oleracea XP_013585320.1, XP_013594912.1
- Brassica rapa XP_009145538.1, XP_009110075.1
- Raphanus raphanistrum RrC1442_p4, RrC7414_p3
Sequences
cDNA Sequence
- >AT3G20880.1
GATAGCAAGTTTCTTTTTCCCTTCTTCAAACTTTCTCATTGTTTCTTTTCTACCTACTATCTTCTCCGTACCCTTTTCTATCAATTAACATATGCTATTTTCCACTGTTTTGTCACATCGCACCTTATATATACTCACATGTCCTAATACACTCATACACTCATACACACACCCACATATACATGCATATCTAGCTTTCACTGGTTTCTTAACACAACTCCATCATCTAGAGATATCTTGCCTTCTTCTTCTTTTTTTCTCACTATCTTCTCTCCTAAAGTTAATGGCTGATCCAGATTGTATCTTCAGAAATGGATATGTAGACTACTATAACTATAGCTTCAACTATGCCACTTCCCTCTCACGCATCTACAACTCTCATGACAGCTTTTATTATCCTCACCAGACGACAAACCCAAACATCAACGAAAACCCTAATTTGACTTCACCTGACTCTCCTCCACTTAGAGAAGCCCTCCCTCTCCTTAGCTTAAGCCCCATTCATAAGCATCAAGAACCTACTGCTAACCACCATGAGTACTATTTCATGGAGACGACAGAAACTTCCTCTAATTCAAACTTTCTTGATCAATGCCAAGACAGTTATCGTCATGATGTAACCGTGGATCTTCATCTAGGGTTACCAAACCTCGGTGATGGTGGAAGCAGCAGCAGCGATGTGGTCCTTGATTCCACCGACCACCAAGAGGGTCACCATGATCATCATCAAGATCAAGGACTTGAAGTTACTATGGCTTCTGACCATGATGATGAACATGGTGGCTTACAAAGGGGTAATCATCTTCATCACTTTTGGATCCCGACTCCTTCTCAGATTCTGATGGGTCCAACACAGTTCTCTTGTCCTCTATGCTTCAAGACTTTCAACAGATACAACAACATGCAAATGCACATGTGGGGACATGGTTCACAATACAGAAAAGGACCGGAGTCGCTGAGAGGGACACAACCAACGGCGATGCTGAAGCTGCCTTGCTACTGCTGTGCACCGGGCTGCAAGAACAACATAGACCACCCAAGGGCTAGGCCGCTCAAGGACTTCCGTACGCTTCAGACACATTACAAGCGGAAGCACGGTGTGAGGCCCTTTGCTTGTCGTAGGTGTGGGAAGGCATTTGCGGTCAAAGGAGATTGGAGGACTCACGAGAAGAACTGTGGGAAGCTATGGTATTGCTCATGTGGGTCGGATTTTAAGCACAAGAGGTCACTTAAAGACCACGTTAAGGCCTTTGGGAATGGTCATGTCCCTTGTTGTGGAATTGATCATGAGGAAGAGGAGGCTGCTTCTGATGTCGAGCAGCAAGAATGATCGTGTTTAGTGTTGTTGTTGTTTCGAGCATTAATTAATTGTATGCTTTATGCTTGTGATTTCTTCTTCGTCGTCTTTGCTTTTTTTAGGGATTAGTATAATTATTAATGGGAATAGCAGAAGCTTTAAATTTACTGTATTAATTGACTATTGAGGTCTTTGTTAACAAATGTTAGAACGTATCCTAAAAAAAGTTTTTAGAATGTGTCTTATTTGATATA
CDS Sequence
- >AT3G20880.1
ATGCTATTTTCCACTGTTTTGTCACATCGCACCTTATATATACTCACATGTCCTAATACACTCATACACTCATACACACACCCACATATACATGCATATCTAGCTTTCACTGGTTTCTTAACACAACTCCATCATCTAGAGATATCTTGCCTTCTTCTTCTTTTTTTCTCACTATCTTCTCTCCTAAAGTTAATGGCTGATCCAGATTGTATCTTCAGAAATGGATATGTAGACTACTATAACTATAGCTTCAACTATGCCACTTCCCTCTCACGCATCTACAACTCTCATGACAGCTTTTATTATCCTCACCAGACGACAAACCCAAACATCAACGAAAACCCTAATTTGACTTCACCTGACTCTCCTCCACTTAGAGAAGCCCTCCCTCTCCTTAGCTTAAGCCCCATTCATAAGCATCAAGAACCTACTGCTAACCACCATGAGTACTATTTCATGGAGACGACAGAAACTTCCTCTAATTCAAACTTTCTTGATCAATGCCAAGACAGTTATCGTCATGATGTAACCGTGGATCTTCATCTAGGGTTACCAAACCTCGGTGATGGTGGAAGCAGCAGCAGCGATGTGGTCCTTGATTCCACCGACCACCAAGAGGGTCACCATGATCATCATCAAGATCAAGGACTTGAAGTTACTATGGCTTCTGACCATGATGATGAACATGGTGGCTTACAAAGGGGTAATCATCTTCATCACTTTTGGATCCCGACTCCTTCTCAGATTCTGATGGGTCCAACACAGTTCTCTTGTCCTCTATGCTTCAAGACTTTCAACAGATACAACAACATGCAAATGCACATGTGGGGACATGGTTCACAATACAGAAAAGGACCGGAGTCGCTGAGAGGGACACAACCAACGGCGATGCTGAAGCTGCCTTGCTACTGCTGTGCACCGGGCTGCAAGAACAACATAGACCACCCAAGGGCTAGGCCGCTCAAGGACTTCCGTACGCTTCAGACACATTACAAGCGGAAGCACGGTGTGAGGCCCTTTGCTTGTCGTAGGTGTGGGAAGGCATTTGCGGTCAAAGGAGATTGGAGGACTCACGAGAAGAACTGTGGGAAGCTATGGTATTGCTCATGTGGGTCGGATTTTAAGCACAAGAGGTCACTTAAAGACCACGTTAAGGCCTTTGGGAATGGTCATGTCCCTTGTTGTGGAATTGATCATGAGGAAGAGGAGGCTGCTTCTGATGTCGAGCAGCAAGAATGA
Protein Sequence
- >AT3G20880.1
MLFSTVLSHRTLYILTCPNTLIHSYTHPHIHAYLAFTGFLTQLHHLEISCLLLLFFSLSSLLKLMADPDCIFRNGYVDYYNYSFNYATSLSRIYNSHDSFYYPHQTTNPNINENPNLTSPDSPPLREALPLLSLSPIHKHQEPTANHHEYYFMETTETSSNSNFLDQCQDSYRHDVTVDLHLGLPNLGDGGSSSSDVVLDSTDHQEGHHDHHQDQGLEVTMASDHDDEHGGLQRGNHLHHFWIPTPSQILMGPTQFSCPLCFKTFNRYNNMQMHMWGHGSQYRKGPESLRGTQPTAMLKLPCYCCAPGCKNNIDHPRARPLKDFRTLQTHYKRKHGVRPFACRRCGKAFAVKGDWRTHEKNCGKLWYCSCGSDFKHKRSLKDHVKAFGNGHVPCCGIDHEEEEAASDVEQQE