Information report for AT3G20550
Gene Details
|
|
Functional Descriptions
- CS6932 — Defective growth throughout the plant: slow growth; short roots; small, narrow and curled rosette leaves; delayed flowering time; floral organs are defective and altered in number; reduced fertility; reduced plant size.
- CS6933 — Defective growth throughout the plant: slow growth; short roots; small and curled rosette leaves; delayed flowering time; altered floral organ numbers, defective floral organs and reduced fertility; reduced plant size.
- ddl — Delayed growth, curly leaves, abnormal flowers
Functional Keywords
Literature and News
- Computational identification of 69 retroposons in Arabidopsis. DOI: 10.1104/pp.105.060244 ; PMID: 15923328
- DAWDLE, a forkhead-associated domain gene, regulates multiple aspects of plant development. DOI: 10.1104/pp.106.076893 ; PMID: 16679419
- Arabidopsis PPP family of serine/threonine phosphatases. DOI: 10.1016/j.tplants.2007.03.003 ; PMID: 17368080
- Site-specific phosphorylation profiling of Arabidopsis proteins by mass spectrometry and peptide chip analysis. DOI: 10.1021/pr8000173 ; PMID: 18433157
- The FHA domain proteins DAWDLE in Arabidopsis and SNIP1 in humans act in small RNA biogenesis. DOI: 10.1073/pnas.0804218105 ; PMID: 18632581
- Crystal structure of Arabidopsis thaliana Dawdle forkhead-associated domain reveals a conserved phospho-threonine recognition cleft for dicer-like 1 binding. DOI: 10.1093/mp/sst007 ; PMID: 23313986
- The rolB gene activates the expression of genes encoding microRNA processing machinery. DOI: 10.1007/s10529-014-1743-7 ; PMID: 25491479
- DAWDLE Interacts with DICER-LIKE Proteins to Mediate Small RNA Biogenesis. DOI: 10.1104/pp.18.00354 ; PMID: 29784765
- miR394 Acts as a Negative Regulator of Arabidopsis Resistance to B. cinerea Infection by Targeting LCR. DOI: 10.3389/fpls.2018.00903 ; PMID: 30018624
- DEAD-BOX RNA HELICASE 27 regulates microRNA biogenesis, zygote division, and stem cell homeostasis. DOI: 10.1093/plcell/koaa001 ; PMID: 33751089
- An Arabidopsis Retention and Splicing complex regulates root and embryo development through pre-mRNA splicing. DOI: 10.1093/plphys/kiac256 ; PMID: 35640107
- The Arabidopsis thaliana chloroplast proteome reveals pathway abundance and novel protein functions. DOI: 10.1016/j.cub.2004.02.039 ; PMID: 15028209
- DAWDLE, a forkhead-associated domain gene, regulates multiple aspects of plant development. DOI: 10.1104/pp.106.076893 ; PMID: 16679419
- Site-specific phosphorylation profiling of Arabidopsis proteins by mass spectrometry and peptide chip analysis. DOI: 10.1021/pr8000173 ; PMID: 18433157
Gene Resources
- UniProt: A0A5S9XE78
- EMBL: CACRSJ010000106, CACSHJ010000089, LR881468
- AlphaFoldDB: A0A5S9XE78
- EnsemblPlants: AT3G20550.1
- Gramene: AT3G20550.1
- KEGG: ath:AT3G20550
- Orthologous matrix: RNDQHKQ
- ExpressionAtlas: AT3G20550
- InterPro: IPR000253, IPR008984, IPR050923
- PANTHER: PTHR23308
- SUPFAM: SSF49879
- PROSITE: PS50006
- Gene3D: 2.60.200.20
- OrthoDB: A0A5S9XE78
- SWISS-MODEL: A0A5S9XE78
- Conserved Domain Database: cd22719
Sequences
cDNA Sequence
- >AT3G20550.1
TATTGAACCCCTCAGTTTCCATTTATTTGCAAAAGAGGCCAAATAAATGATTCTTCTCGTTTTGGCTCTGATTCTTTTTATCTCTGCGATTATTATTATTCACTCTCTCCTCTTCTCTCCGCCGAAGTAGTCACAGTTCCGGCCACCAGGCAAAGAAGAGAGAAAACGACCCTGACTCCAATAATGGCTCCTAGTTCTAGGTCTCCTTCACCACGTACGAAGAGACTGAGAAGAGCTCGAGGAGAGAAGGAAATTGGGAGAAGTAGAGAGAGAGAAGATGATGGTAGAGAAAGGGAGAAGAGAAACAGTAGGGAAAGGGATAGAGATATAGGAAGAGATAGGGATAGGGAGAGAAAAGGAGAAGGAGAAAGAGATAGGGAAGTTGGGGATAAGAGAAGACGATCAGGGAGAGAGGATACTGAAAAAAGGAGAAGGACAAGAACAGATGATGAGAGATACTCTAGAGGAAGACATGAGAGGTCTACTTCACCGTCAGATAGGAGTCACAGGAGTAGTAGGCGTTCACCTGAAAGAGCTATTGCCTCAAGGCATGATGAGGGGTCTAATGCAAGAGGGGGCAGCGAGGAGCCAAATGTCGAGGAAGATTCAGTCGCGAGAATGAGAGCAGTTGAAGAGGCTCTGGCAGCGAAGAAAAAGGAAGAACCATCATTTGAGCTATCAGGGAAACTTGCTGAAGAAACTAACAGATACAGAGGTATCACACTCCTCTTCAATGAGCCCCCAGAGGCTAGAAAACCCAGCGAACGATGGAGACTGTATGTTTTTAAGGATGGTGAACCACTGAATGAGCCACTCTGCCTTCACCGCCAAAGCTGCTACCTCTTTGGACGTGAAAGAAGGATTGCCGACATTCCTACGGATCACCCATCTTGCAGCAAGCAGCATGCTGTCATTCAGTACCGGGAAATGGAAAAGGAGAAACCAGATGGTATGATGGGGAAGCAAGTGAAGCCTTACATAATGGATCTTGGTAGTACCAACAAAACTTATATCAATGAAAGTCCCATTGAGCCACAAAGATATTATGAGCTTTTTGAGAAAGACACCATAAAGTTTGGCAACAGCAGCCGAGAGTACGTACTGTTGCACGAGAATTCTGCCGAGTGAATGAAATCAGAGTCAAGCAGAAACGAGTAAATCACAAGATTAGATAGTTGCGTTTCTCAGGGTTTTTAGAGATGTTTGAGCTGCTTCATGTATGCTTTCTACCGTGCTGGTGATAATCTCAGACATCATTTAGAAATCTTTTGCTTGCTTGTTATATAATAAATGATGATGAACGATTGGTAAGAGAAAAAGGTTAACTTTTGGTATAACTGTATAAGATCAATCTCTACTTTAAAATTGTCGCTCCCTGAGGGTTTCG
CDS Sequence
- >AT3G20550.1
ATGGCTCCTAGTTCTAGGTCTCCTTCACCACGTACGAAGAGACTGAGAAGAGCTCGAGGAGAGAAGGAAATTGGGAGAAGTAGAGAGAGAGAAGATGATGGTAGAGAAAGGGAGAAGAGAAACAGTAGGGAAAGGGATAGAGATATAGGAAGAGATAGGGATAGGGAGAGAAAAGGAGAAGGAGAAAGAGATAGGGAAGTTGGGGATAAGAGAAGACGATCAGGGAGAGAGGATACTGAAAAAAGGAGAAGGACAAGAACAGATGATGAGAGATACTCTAGAGGAAGACATGAGAGGTCTACTTCACCGTCAGATAGGAGTCACAGGAGTAGTAGGCGTTCACCTGAAAGAGCTATTGCCTCAAGGCATGATGAGGGGTCTAATGCAAGAGGGGGCAGCGAGGAGCCAAATGTCGAGGAAGATTCAGTCGCGAGAATGAGAGCAGTTGAAGAGGCTCTGGCAGCGAAGAAAAAGGAAGAACCATCATTTGAGCTATCAGGGAAACTTGCTGAAGAAACTAACAGATACAGAGGTATCACACTCCTCTTCAATGAGCCCCCAGAGGCTAGAAAACCCAGCGAACGATGGAGACTGTATGTTTTTAAGGATGGTGAACCACTGAATGAGCCACTCTGCCTTCACCGCCAAAGCTGCTACCTCTTTGGACGTGAAAGAAGGATTGCCGACATTCCTACGGATCACCCATCTTGCAGCAAGCAGCATGCTGTCATTCAGTACCGGGAAATGGAAAAGGAGAAACCAGATGGTATGATGGGGAAGCAAGTGAAGCCTTACATAATGGATCTTGGTAGTACCAACAAAACTTATATCAATGAAAGTCCCATTGAGCCACAAAGATATTATGAGCTTTTTGAGAAAGACACCATAAAGTTTGGCAACAGCAGCCGAGAGTACGTACTGTTGCACGAGAATTCTGCCGAGTGA
Protein Sequence
- >AT3G20550.1
MAPSSRSPSPRTKRLRRARGEKEIGRSREREDDGREREKRNSRERDRDIGRDRDRERKGEGERDREVGDKRRRSGREDTEKRRRTRTDDERYSRGRHERSTSPSDRSHRSSRRSPERAIASRHDEGSNARGGSEEPNVEEDSVARMRAVEEALAAKKKEEPSFELSGKLAEETNRYRGITLLFNEPPEARKPSERWRLYVFKDGEPLNEPLCLHRQSCYLFGRERRIADIPTDHPSCSKQHAVIQYREMEKEKPDGMMGKQVKPYIMDLGSTNKTYINESPIEPQRYYELFEKDTIKFGNSSREYVLLHENSAE