Information report for AT3G20390
Gene Details
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Functional Descriptions
- PO:0000084 — plant sperm cell — célula espermática o esperma (Spanish, exact), male gamete (exact), microgamete (exact), 植物精子細胞 (Japanese, exact), sperm nucleus (related), sperm cell (broad)
- PO:0025195 — pollen tube cell — célula del tubo polínico (Spanish, exact), 花粉管細胞 (Japanese, exact)
- PO:0025281 — pollen — polen (Spanish, exact), pollen grain (exact), 花粉 (Japanese, exact)
Functional Keywords
Literature and News
- Nuclear genes that encode mitochondrial proteins for DNA and RNA metabolism are clustered in the Arabidopsis genome. DOI: 10.1105/tpc.010009 ; PMID: 12837951
- The early responses of Arabidopsis thaliana cells to cadmium exposure explored by protein and metabolite profiling analyses. DOI: 10.1002/pmic.200500543 ; PMID: 16502469
- Mapping the Arabidopsis organelle proteome. DOI: 10.1073/pnas.0506958103 ; PMID: 16618929
- A phosphatidic acid-binding protein of the chloroplast inner envelope membrane involved in lipid trafficking. DOI: 10.1073/pnas.0602754103 ; PMID: 16818883
- Global analysis of Arabidopsis gene expression uncovers a complex array of changes impacting pathogen response and cell cycle during geminivirus infection. DOI: 10.1104/pp.108.121038 ; PMID: 18650403
- Transcriptome analyses show changes in gene expression to accompany pollen germination and tube growth in Arabidopsis. DOI: 10.1104/pp.108.126375 ; PMID: 18775970
- Identification of lipids and lipid-binding proteins in phloem exudates from Arabidopsis thaliana. DOI: 10.1093/jxb/ers028 ; PMID: 22442409
- The Arabidopsis thaliana chloroplast proteome reveals pathway abundance and novel protein functions. DOI: 10.1016/j.cub.2004.02.039 ; PMID: 15028209
- The vegetative vacuole proteome of Arabidopsis thaliana reveals predicted and unexpected proteins. DOI: 10.1105/tpc.104.027078 ; PMID: 15539469
- The early responses of Arabidopsis thaliana cells to cadmium exposure explored by protein and metabolite profiling analyses. DOI: 10.1002/pmic.200500543 ; PMID: 16502469
- Mapping the Arabidopsis organelle proteome. DOI: 10.1073/pnas.0506958103 ; PMID: 16618929
- High light response of the thylakoid proteome in arabidopsis wild type and the ascorbate-deficient mutant vtc2-2. A comparative proteomics study. DOI: 10.1104/pp.106.080150 ; PMID: 16648217
- Sorting signals, N-terminal modifications and abundance of the chloroplast proteome. DOI: 10.1371/journal.pone.0001994 ; PMID: 18431481
- Analysis of protein complexes in Arabidopsis leaves using size exclusion chromatography and label-free protein correlation profiling. DOI: 10.1016/j.jprot.2017.06.004 ; PMID: 28627464
Gene Resources
- UniProt: A0A5S9XE57
- EMBL: CACRSJ010000106, CACSHJ010000089
- AlphaFoldDB: A0A5S9XE57
- EnsemblPlants: AT3G20390.1
- Gramene: AT3G20390.1
- KEGG: ath:AT3G20390
- ExpressionAtlas: AT3G20390
- InterPro: IPR006056, IPR006175, IPR019897
- PANTHER: PTHR11803, PTHR11803:SF39
- SUPFAM: SSF55298
- PROSITE: PS01094
- Gene3D: 3.30.1330.40
- OrthoDB: A0A5S9XE57
- SWISS-MODEL: A0A5S9XE57
- Conserved Domain Database: cd00448
Homologs
- Brassica oleracea Bo6g087910
- Brassica rapa Bra017587
- Fragaria vesca mrna03384.1-v1.0-hybrid
Sequences
cDNA Sequence
- >AT3G20390.1
GAAGAAGCACGAGAATCATCTGCTTAAAATCCAATCGCATCGACTCAGTCTTCTTCTTCTTCTTCACCTACCTTTCTCTCTCTCTCTCGTGGTCCATTCGCTATTCTATACTTCTTGTCGGCGCCGGAGAGAGTGAGATGACTTGGTCGGTTTTCAGATCCATAAATACTCCAACACTCGACCTCTCCACCGCACTTCGCTCCACTCGTACCCCATTGGTCGCTGCTGGTGTCGGCTGCGCAACATTCGCTGGTGTTTCTCTCTTCAGAATGTCTTCTAGATCTCCTCCTTTCGCTTCCCTCTCTGTCTCTGCTTCTTCTGTGAAGAAGGAAGTTGTGTCTACTGAGAAAGCACCAGCTGCTTTGGGACCTTACTCTCAGGCCATTAAAGCCAATAATCTGGTTTTTCTTTCAGGTGTTCTTGGACTTATACCTGAGACTGGAAAGTTTGTTTCGGAGAGCGTCGAAGATCAGACTGAGCAGGTACTCAAAAACATGGGGGAGATATTGAAAGCTAGTGGTGCTGATTATTCCTCGGTGGTGAAGACAACAATCATGTTGGCTGATTTGGCTGACTTCAAGACAGTGAACGAGATATATGCCAAATACTTCCCAGCTCCTTCTCCAGCACGATCGACGTATCAAGTTGCAGCTTTGCCTCTAAACGCCAAGATCGAGATTGAATGTATTGCAACACTCTAGAACACTCAAATCAATCTCTACGAAGGGTATTTTGGTCCGGAAGATGTCAAAACAAATAAGAGAAACAATGGTTTTTGGGGCTTAACCCATATTTAACCTACTTTTCATTTTGCTGCACTACGAAAAATGTTGCGGATTATCAACCATTAGGTTGGTTACAAATCAAAAGCCTCTAATCAAGAATAAGTTATTTAGTGTCTTGTCCACCCTCATTTGCTGTTGACGTATATGTATTGATTGTATACATTATTTTATTTGAGTGAAAACCATTATGCTTGAAGAGACAAGAGTTAATAACTTAATATGGTCGTTAGAAGAGGAATGATAATTTAATATTGCTAGAGAAAGAAAATATATGTAAAAAA - >AT3G20390.2
GAAGAAGCACGAGAATCATCTGCTTAAAATCCAATCGCATCGACTCAGTCTTCTTCTTCTTCTTCACCTACCTTTCTCTCTCTCTCTCGTGGTCCATTCGCTATTCTATACTTCTTGTCGGCGCCGGAGAGAGTGAGATGACTTGGTCGGTTTTCAGATCCATAAATACTCCAACACTCGACCTCTCCACCGCACTTCGCTCCACTCGTACCCCATTGGTCGCTGCTGGTGTCGGCTGCGCAACATTCGCTGGTGTTTCTCTCTTCAGAATGTCTTCTAGATCTCCTCCTTTCGCTTCCCTCTCTGTCTCTGCTTCTTCTGTGAAGAAGGAAGTTGTGTCTACTGAGAAAGCACCAGCTGCTTTGGGACCTTACTCTCAGGCCATTAAAGCCAATAATCTGGTTTTTCTTTCAGGTGTTCTTGGACTTATACCTGAGACTGGAAAGTTTGTTTCGGAGAGCGTCGAAGATCAGACTGAGCAGGTACTCAAAAACATGGGGGAGATATTGAAAGCTAGTGGTGCTGATTATTCCTCGGTGGTGAAGACAACAATCATGTTGGCTGATTTGGCTGACTTCAAGACAGTGAACGAGATATATGCCAAATACTTCCCAGCTCCTTCTCCAGCACGATCGACGTATCAAGTTGCAGCTTTGCCTCTAAACGCCAAGATCGAGATTGAATGTATTGCAACACTCTAGAACACTCAAATCAATCTCTACGAAGGGTATTTTGGTCCGGAAGATGTCAAAACAAATAAGAGAAACAATGGTTTTTGGGGCTTAACCCATATTTAACCTACTTTTCATTTTGCTGCACTACGAAAAATGTTGCGGATTATCAACCATTAGGTTGGTTACAAATCAAAAGCCTCTAATCAAGAATAAGTTATTTAGTGTCTTGTCCACCCTCATTTGCTGTTGACGTATATGTATTGATTGTATACATTATTTTATTTGAGTGAAAACCATTATGCTTGAAGAGACAAGAGTTAATAACTTAATATGGTCGTTAGAAGAGGAATGATAATTTAATATTGCTAGAGAAAGAAAATATATGTAAAAAA
CDS Sequence
- >AT3G20390.1
ATGACTTGGTCGGTTTTCAGATCCATAAATACTCCAACACTCGACCTCTCCACCGCACTTCGCTCCACTCGTACCCCATTGGTCGCTGCTGGTGTCGGCTGCGCAACATTCGCTGGTGTTTCTCTCTTCAGAATGTCTTCTAGATCTCCTCCTTTCGCTTCCCTCTCTGTCTCTGCTTCTTCTGTGAAGAAGGAAGTTGTGTCTACTGAGAAAGCACCAGCTGCTTTGGGACCTTACTCTCAGGCCATTAAAGCCAATAATCTGGTTTTTCTTTCAGGTGTTCTTGGACTTATACCTGAGACTGGAAAGTTTGTTTCGGAGAGCGTCGAAGATCAGACTGAGCAGGTACTCAAAAACATGGGGGAGATATTGAAAGCTAGTGGTGCTGATTATTCCTCGGTGGTGAAGACAACAATCATGTTGGCTGATTTGGCTGACTTCAAGACAGTGAACGAGATATATGCCAAATACTTCCCAGCTCCTTCTCCAGCACGATCGACGTATCAAGTTGCAGCTTTGCCTCTAAACGCCAAGATCGAGATTGAATGTATTGCAACACTCTAG - >AT3G20390.2
ATGACTTGGTCGGTTTTCAGATCCATAAATACTCCAACACTCGACCTCTCCACCGCACTTCGCTCCACTCGTACCCCATTGGTCGCTGCTGGTGTCGGCTGCGCAACATTCGCTGGTGTTTCTCTCTTCAGAATGTCTTCTAGATCTCCTCCTTTCGCTTCCCTCTCTGTCTCTGCTTCTTCTGTGAAGAAGGAAGTTGTGTCTACTGAGAAAGCACCAGCTGCTTTGGGACCTTACTCTCAGGCCATTAAAGCCAATAATCTGGTTTTTCTTTCAGGTGTTCTTGGACTTATACCTGAGACTGGAAAGTTTGTTTCGGAGAGCGTCGAAGATCAGACTGAGCAGGTACTCAAAAACATGGGGGAGATATTGAAAGCTAGTGGTGCTGATTATTCCTCGGTGGTGAAGACAACAATCATGTTGGCTGATTTGGCTGACTTCAAGACAGTGAACGAGATATATGCCAAATACTTCCCAGCTCCTTCTCCAGCACGATCGACGTATCAAGTTGCAGCTTTGCCTCTAAACGCCAAGATCGAGATTGAATGTATTGCAACACTCTAG
Protein Sequence
- >AT3G20390.1
MTWSVFRSINTPTLDLSTALRSTRTPLVAAGVGCATFAGVSLFRMSSRSPPFASLSVSASSVKKEVVSTEKAPAALGPYSQAIKANNLVFLSGVLGLIPETGKFVSESVEDQTEQVLKNMGEILKASGADYSSVVKTTIMLADLADFKTVNEIYAKYFPAPSPARSTYQVAALPLNAKIEIECIATL - >AT3G20390.2
MTWSVFRSINTPTLDLSTALRSTRTPLVAAGVGCATFAGVSLFRMSSRSPPFASLSVSASSVKKEVVSTEKAPAALGPYSQAIKANNLVFLSGVLGLIPETGKFVSESVEDQTEQVLKNMGEILKASGADYSSVVKTTIMLADLADFKTVNEIYAKYFPAPSPARSTYQVAALPLNAKIEIECIATL