Information report for AT3G20310
Gene Details
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Functional Descriptions
- PO:0000293 — guard cell — célula guardiana (Spanish, exact), occlusive cell (exact), 孔辺細胞 (Japanese, exact)
- PO:0000013 — cauline leaf — hoja caulinar (Spanish, exact), 茎生葉、茎葉 (Japanese, exact)
- PO:0009001 — fruit — frucht (exact, German), fruto (exact, Spanish), 果実 (exact, Japanese), coenocarp (narrow), syncarp (narrow), aggregate fruit (broad), compound fruit (broad), dehiscent fruit (broad), diaspore (broad), indehiscent fruit (broad), multiple fruit (broad), propagule (broad)
- PO:0009005 — root — raíz (Spanish, exact), radices (exact, plural), radix (exact), 根 (Japanese, exact), aerial root (narrow), climbing root (narrow)
- PO:0009010 — seed — semilla (Spanish, exact), 種子 (Japanese, exact), pyrene (narrow), diaspore (broad)
- PO:0009029 — stamen — estambre (Spanish, exact), 雄蕊 (Japanese, exact), Poaceae stamen (narrow), Zea stamen (narrow)
- PO:0009031 — sepal — sépalo (Spanish, exact), がく片 (Japanese, exact)
- PO:0009032 — petal — pétalo (Spanish, exact), 花弁 (Japanese, exact)
- PO:0009047 — stem — caña (Spanish, exact), culm (exact), eje primario (Spanish, exact), primary axis (exact), primary stem (exact), tallo (Spanish, exact), tronco (Spanish, exact), 茎 (Japanese, exact), bole (narrow), cane (narrow), caudex (narrow), caudices (narrow), core (narrow), primocane (narrow), scape (narrow), stalk (narrow), trunk (narrow)
- PO:0009062 — gynoecium — ginoecio (Spanish, exact), gynaecium (exact), gynoecia (exact, plural), 雌蕊群 (Japanese, exact), Poaceae gynoecium (narrow), Zea gynoecium (narrow), apocarpous gynoecium (narrow), gynoecium of ear floret (narrow), gynoecium of lower floret of pedicellate spikelet of ear (narrow), gynoecium of lower floret of pedicellate spikelet of tassel (narrow), gynoecium of lower floret of sessile spikelet of ear (narrow), gynoecium of lower floret of sessile spikelet of tassel (narrow), gynoecium of tassel floret (narrow), gynoecium of upper floret of pedicellate spikelet of ear (narrow), gynoecium of upper floret of pedicellate spikelet of tassel (narrow), gynoecium of upper floret of sessile spikelet of ear (narrow), gynoecium of upper floret of sessile spikelet of tassel (narrow), syncarpous gynoecium (narrow), pistil (broad)
- PO:0020030 — cotyledon — cotiledón (Spanish, exact), seed leaf (exact), 子葉 (Japanese, exact)
- PO:0020100 — hypocotyl — hipocótile (Spanish, exact), 胚軸 (Japanese, exact)
- PO:0025195 — pollen tube cell — célula del tubo polínico (Spanish, exact), 花粉管細胞 (Japanese, exact)
- PO:0025281 — pollen — polen (Spanish, exact), pollen grain (exact), 花粉 (Japanese, exact)
Functional Keywords
- guard cell , cauline leaf , fruit , root , seed , stamen , sepal , petal , stem , gynoecium , cotyledon , hypocotyl , pollen tube cell , pollen
Literature and News
- The AP2/EREBP family of plant transcription factors. DOI: 10.1515/bchm.1998.379.6.633 ; PMID: 9687012
- Arabidopsis transcription factors: genome-wide comparative analysis among eukaryotes. DOI: 10.1126/science.290.5499.2105 ; PMID: 11118137
- Repression domains of class II ERF transcriptional repressors share an essential motif for active repression. DOI: 10.1105/tpc.010127 ; PMID: 11487705
- The Arabidopsis transcription factor HY5 integrates light and hormone signaling pathways. DOI: 10.1111/j.1365-313X.2004.02052.x ; PMID: 15078335
- Genes involved in biosynthesis and signalisation of ethylene in Brassica oleracea and Arabidopsis thaliana: identification and genome comparative mapping of specific gene homologues. DOI: 10.1007/s00122-005-0136-7 ; PMID: 16311726
- The barley ERF-type transcription factor HvRAF confers enhanced pathogen resistance and salt tolerance in Arabidopsis. DOI: 10.1007/s00425-006-0373-2 ; PMID: 16937017
- Different plant hormones regulate similar processes through largely nonoverlapping transcriptional responses. DOI: 10.1016/j.cell.2006.05.050 ; PMID: 16901781
- Cross-talk between ethylene and drought signalling pathways is mediated by the sunflower Hahb-4 transcription factor. DOI: 10.1111/j.1365-313X.2006.02865.x ; PMID: 16972869
- AthaMap web tools for the analysis and identification of co-regulated genes. DOI: 10.1093/nar/gkl1006 ; PMID: 17148485
- Transcriptome analyses show changes in gene expression to accompany pollen germination and tube growth in Arabidopsis. DOI: 10.1104/pp.108.126375 ; PMID: 18775970
- Enhanced Y1H assays for Arabidopsis. DOI: 10.1038/nmeth.1750 ; PMID: 22037706
- Four distinct types of dehydration stress memory genes in Arabidopsis thaliana. DOI: 10.1186/1471-2229-13-229 ; PMID: 24377444
- Promoter-based integration in plant defense regulation. DOI: 10.1104/pp.114.248716 ; PMID: 25352272
- An Arabidopsis gene regulatory network for secondary cell wall synthesis. DOI: 10.1038/nature14099 ; PMID: 25533953
- Distinct branches of the N-end rule pathway modulate the plant immune response. DOI: 10.1111/nph.15387 ; PMID: 30117535
- A PXY-Mediated Transcriptional Network Integrates Signaling Mechanisms to Control Vascular Development in Arabidopsis. DOI: 10.1105/tpc.19.00562 ; PMID: 31806676
- The AP2/EREBP family of plant transcription factors. DOI: 10.1515/bchm.1998.379.6.633 ; PMID: 9687012
- Arabidopsis transcription factors: genome-wide comparative analysis among eukaryotes. DOI: 10.1126/science.290.5499.2105 ; PMID: 11118137
- Repression domains of class II ERF transcriptional repressors share an essential motif for active repression. DOI: 10.1105/tpc.010127 ; PMID: 11487705
- Role of an Arabidopsis AP2/EREBP-type transcriptional repressor in abscisic acid and drought stress responses. DOI: 10.1105/tpc.105.033043 ; PMID: 15994908
- Arabidopsis ERF4 is a transcriptional repressor capable of modulating ethylene and abscisic acid responses. DOI: 10.1007/s11103-005-7294-5 ; PMID: 16021341
- An annotation update via cDNA sequence analysis and comprehensive profiling of developmental, hormonal or environmental responsiveness of the Arabidopsis AP2/EREBP transcription factor gene family. DOI: 10.1007/s11103-005-1511-0 ; PMID: 16307362
- Expression pattern shifts following duplication indicative of subfunctionalization and neofunctionalization in regulatory genes of Arabidopsis. DOI: 10.1093/molbev/msj051 ; PMID: 16280546
- Genome-wide analysis of the ERF gene family in Arabidopsis and rice. DOI: 10.1104/pp.105.073783 ; PMID: 16407444
Gene Resources
- UniProt: A0A178VH38
- EMBL: CACRSJ010000106, CACSHJ010000089, LR881468
- AlphaFoldDB: A0A178VH38
- EnsemblPlants: AT3G20310.1
- Gramene: AT3G20310.1
- KEGG: ath:AT3G20310
- Orthologous matrix: HAIKRYP
- ExpressionAtlas: AT3G20310
- InterPro: IPR001471, IPR016177, IPR036955
- PANTHER: PTHR31677, PTHR31677:SF260
- SUPFAM: SSF54171
- PROSITE: PS51032
- Gene3D: 3.30.730.10
- OrthoDB: A0A178VH38
- SWISS-MODEL: A0A178VH38
- Conserved Domain Database: cd00018
Homologs
- Brassica napus GSBRNA2T00043711001, GSBRNA2T00029543001, GSBRNA2T00059865001, GSBRNA2T00137355001
- Brassica oleracea XP_013638281.1, XP_013622993.1, XP_013608282.1
- Brassica rapa XP_009145644.1, XP_009111164.1, XP_009135680.1
- Raphanus raphanistrum RrC18904_p1
Sequences
cDNA Sequence
- >AT3G20310.1
TATTAAATGAAAATTCTTTGAGTAAATTATTTAGAAAAAAAAAAAGAGAATTATAATAATAATTTCCAATCTCTACCCTTTGTTCCTTCATCTTCTTCCTCATCTTTCTTCTCTCTTCAACATTTTCTTCTCTTCTTCACACAAACACACACAGATCTCTTCTTCATCACATTACTTCTGGCTTTACATCTTTTTTCTTCTCCATGAGGAAAGGGAGAGGCTCTTCCGTCGTTGGACCCGCCCTTCCAGTAACCGCCGGTGGATCTGTGAAGGAGCCGAGGTATAGAGGCGTTAGGAAGAGACCTTGGGGTCGATTCGCAGCTGAGATCCGTGATCCATTAAAAAAATCTCGTGTCTGGCTCGGTACTTTCGATTCCGCCGTAGATGCTGCACGCGCTTACGATACCGCCGCACGTAACCTCCGTGGTCCAAAGGCCAAGACCAATTTCCCGATCGATTGTTCTCCTTCTTCTCCTCTCCAACCTCTCACCTACCTCCACAATCAAAACCTCTGTTCTCCTCCGGTGATTCAGAACCAGATCGATCCGTTTATGGACCATCGGTTATACGGCGGAGGTAATTTCCAGGAGCAGCAGCAGCAGCAGATTATTAGTCGGCCGGCGAGTAGCAGCATGAGCAGCACCGTTAAATCTTGTAGCGGACCGAGACCGATGGAAGCCGCGGCGGCGTCTTCGTCGGTGGCGAAACCGTTACATGCGATTAAGAGATATCCGAGAACTCCACCGGTAGCTCCGGAGGATTGTCATAGCGACTGCGATTCTTCGTCGTCTGTTATTGACGACGGAGATGATATCGCATCTTCGTCTTCCCGCCGGAAAACGCCGTTTCAGTTTGATCTTAATTTCCCGCCGTTGGATGGCGTTGACTTATTCGCTGGCGGGATAGATGATCTCCACTGTACCGATCTACGTCTCTGATTTGCTGCTTTACAAAAAAAATCCGTTGATTACACACAAAAAAAATTCTCAAATTTTACAAAATGATAACTTTATGCTCTTTTGTTTTTCCATTTTCCTTTGATATCATATTGAAAGAGAAAAAAAGGAAGAACAAAAAAAAAAGATTGAGCGTGATGATTTTATCATCAACGAAGATGATGACGATTAAAAAGAGAGAGAGATTGTGTTAAGATCTGTTACTGTAAGAACCAGATCTGGGTTTCATTTTTATCTGTTTCTTCTTATAAAAGATCCAACAACCCTTTGTTACATATATATAACATTCTGAAGCTGGTGATGATTTCTGAATGATTCAAATCCATTATCTTTAGATTTCTACTTATTCATAGAGTGTCCCCTGATGTAAGTAGGAAGCTGCATTTACATAGTATGTAACAGAACCACACAGGGCACAAGTATTTGTTTGTGTTTTGTCTCTTGGCTTGATCTTGATCAATTCAGGGTTTCTTCTATTCAACAAGTAAAGCTTAGTGGTTCTCTGAGATGGAAGCAATAAAAAGATGAAAGGAAGAAAGACGGTGAAGCTCCTTTGCTATCTAATTGGGTGATTCGAAGAGGAAGTTAGAATACTCATTGTCATTGTTAAGCCTCAAGTTTTCATTCATCAGCGAGGAGACAAGAAAGGCTTTCCCTTTTGTGTACCCAATGAATATTTTGGATGGTGAAGAACATAGAGATTAAGGGCATGGTCAATGGGCGGTGAGTGGTTTTGTTGTGATCGATAAAGCTCAATGAGCACAGGCCAAATCTTTAGGTTAAAGTTTGGTGGCTGAGATGATTGTTTTGATCTTTAAGAGCTGTGGGTTGAGGTGGCAGAATTCGTTGTGTGTTTGACCTTTTTGATTTGAATTTGCTGGTAGAGAGTTTTCCCAATTTTGGTATCTACTTTGCTTCTATGCCACGGATTCAGACAGTGAATCTTTGTGTCTGAAGCAAAAACCGAGTATTTTTTTACCGTTTTGGGGTAGGCTTCTTCTTAACTTAAAGTGGAAGTCAAAAGCAATGTCTTGTTATTTTCACTGTAACGATTTAAGACAACTGATCTCAAGTCGCTTTTCCTGTTTCGGTTCGTACTCTTAATAATCTTCTATTATTCTGGAGTTGAGATTAATCCACAATGTTACTTTTTACTTTTACAACCTTTCGAGAATTCGGTTGTTCGGCTTTGAAATGATAGTTTCTCTCCAA
CDS Sequence
- >AT3G20310.1
ATGAGGAAAGGGAGAGGCTCTTCCGTCGTTGGACCCGCCCTTCCAGTAACCGCCGGTGGATCTGTGAAGGAGCCGAGGTATAGAGGCGTTAGGAAGAGACCTTGGGGTCGATTCGCAGCTGAGATCCGTGATCCATTAAAAAAATCTCGTGTCTGGCTCGGTACTTTCGATTCCGCCGTAGATGCTGCACGCGCTTACGATACCGCCGCACGTAACCTCCGTGGTCCAAAGGCCAAGACCAATTTCCCGATCGATTGTTCTCCTTCTTCTCCTCTCCAACCTCTCACCTACCTCCACAATCAAAACCTCTGTTCTCCTCCGGTGATTCAGAACCAGATCGATCCGTTTATGGACCATCGGTTATACGGCGGAGGTAATTTCCAGGAGCAGCAGCAGCAGCAGATTATTAGTCGGCCGGCGAGTAGCAGCATGAGCAGCACCGTTAAATCTTGTAGCGGACCGAGACCGATGGAAGCCGCGGCGGCGTCTTCGTCGGTGGCGAAACCGTTACATGCGATTAAGAGATATCCGAGAACTCCACCGGTAGCTCCGGAGGATTGTCATAGCGACTGCGATTCTTCGTCGTCTGTTATTGACGACGGAGATGATATCGCATCTTCGTCTTCCCGCCGGAAAACGCCGTTTCAGTTTGATCTTAATTTCCCGCCGTTGGATGGCGTTGACTTATTCGCTGGCGGGATAGATGATCTCCACTGTACCGATCTACGTCTCTGA
Protein Sequence
- >AT3G20310.1
MRKGRGSSVVGPALPVTAGGSVKEPRYRGVRKRPWGRFAAEIRDPLKKSRVWLGTFDSAVDAARAYDTAARNLRGPKAKTNFPIDCSPSSPLQPLTYLHNQNLCSPPVIQNQIDPFMDHRLYGGGNFQEQQQQQIISRPASSSMSSTVKSCSGPRPMEAAAASSSVAKPLHAIKRYPRTPPVAPEDCHSDCDSSSSVIDDGDDIASSSSRRKTPFQFDLNFPPLDGVDLFAGGIDDLHCTDLRL