Information report for AT3G20160
Gene Details
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Functional Descriptions
Functional Keywords
Literature and News
- Geranylgeranyl pyrophosphate synthase encoded by the newly isolated gene GGPS6 from Arabidopsis thaliana is localized in mitochondria. DOI: 10.1023/a:1005898805326 ; PMID: 9349257
- Genome organization in Arabidopsis thaliana: a survey for genes involved in isoprenoid and chlorophyll metabolism. DOI: 10.1023/a:1023005504702 ; PMID: 12777052
- Characterization of the GGPP synthase gene family in Arabidopsis thaliana. DOI: 10.1007/s11103-013-0070-z ; PMID: 23729351
- Arabidopsis thaliana isoprenyl diphosphate synthases produce the C25 intermediate geranylfarnesyl diphosphate. DOI: 10.1111/tpj.13064 ; PMID: 26505977
- Structural Analyses of Short-Chain Prenyltransferases Identify an Evolutionarily Conserved GFPPS Clade in Brassicaceae Plants. DOI: 10.1016/j.molp.2015.10.010 ; PMID: 26537048
- Enzyme Fusion Removes Competition for Geranylgeranyl Diphosphate in Carotenogenesis. DOI: 10.1104/pp.18.01026 ; PMID: 30309967
- Geranylgeranyl pyrophosphate synthase encoded by the newly isolated gene GGPS6 from Arabidopsis thaliana is localized in mitochondria. DOI: 10.1023/a:1005898805326 ; PMID: 9349257
Gene Resources
- UniProt: A0A1I9LME8
- EMBL: CP002686
- AlphaFoldDB: A0A1I9LME8
- EnsemblPlants: AT3G20160.2
- Gramene: AT3G20160.2
- ExpressionAtlas: AT3G20160
- InterPro: IPR000092, IPR008949, IPR033749
- PANTHER: PTHR43281, PTHR43281:SF20
- SUPFAM: SSF48576
- PROSITE: PS00444, PS00723
- Gene3D: 1.10.600.10
- SWISS-MODEL: A0A1I9LME8
- Conserved Domain Database: cd00685
Homologs
- Brassica oleracea Bol027478
- Oryza sativa OsGGPPS1, OsGPPS, OsGGPPS2;OsGRP, OsSPS2
Sequences
cDNA Sequence
- >AT3G20160.2
CAGTGTTCCAAGGTAAAAGGATCAAACCAAACCCAAAGATGGAAAATCGAGAAGTTTTTGTTTACATTGTCATCTCCATCTTCCGCTCTCTCCAATTCTTGTTTTGGAGATTCCGTCCACGTTACAATGATGTTACGTCTGCGTTGACCCGCCCTCTGACTTCGGCCGCAAGCTATGATTTTAAGTTCATGTCGTATATGGTCAATAAGGCTAAGTCCGTCAATAAAGCACTAGAAGAGGCTGTTCCTCTCCGCGAGCCAGAACTCAAGATCCGTGAGGCCATGAGGTACACGCTTCTCTCCGATGGGAAGCGTGTAAGACCAATGCTTTGCTTAGCTGCATGCGAGCTCGTGGGGGGACAAGAGTCAACCGCAATGTCCGCTGCATGTGCGATTGAGATGCTCCACGCGTCGTCTCTCATCCTAGACGACCTCCCTTGTATGGACAACGACAGCCTCCGACGTGGAAAACCCACTAACCATATAGTCTTTGGCGAGAGTATAGCCATATTAGCTTCTCAAGCGCTCATAGCTTTGGCTGTCCAAAAGACCACGTCATCCACCTTTGCGGACGTTCCCCCAGAGAGGATTCTCAAGACCGTTCAGGAGATGGTTAAAGCAGTGGAAGGGCTTGTTGCAGGTCAACAGGCGGATTTGGCTGGAGAAGCTGTTATGGGAGCTATAATGGGAGGTGGGTCTGATGAAGAGATTGAGAGGCTTCGGAGTTACGCAAGATGTATTGGGTTAATGTTTCAGGTTGTGGACGATGTGCTTGATGTGACCAAATCGTCGGAAGAGCTCGGGAAAACCGCCGGTAAAGATTTGATCGCCGGAAAACTGACGTATCCGAGACTGATGGGAGTGGAGAAATCGAAAGAATATGCTGAGAGATTGAACATAGAAGCGCGGGAACATCTTCTAGGGTTTGATATAGACAAGGTGGCTCCTTTGGTGTCTCTCGCTGATTACATTGTCAACAGACAAAACTGA - >AT3G20160.1
CAGTGTTCCAAGGTAAAAGGATCAAACCAAACCCAAAGATGGAAAATCGAGAAGTTTTTGTTTACATTGTCATCTCCATCTTCCGCTCTCTCCAATTCTTGTTTTGGAGATTCCGTCCACGTTACAATGATGTTACGTCTGCGTTGACCCGCCCTCTGACTTCGGCCGCAAGCTATGATTTTAAGTTCATGTCGTATATGGTCAATAAGGCTAAGTCCGTCAATAAAGCACTAGAAGAGGCTGTTCCTCTCCGCGAGCCAGAACTCAAGATCCGTGAGGCCATGAGGTACACGCTTCTCTCCGATGGGAAGCGTGTAAGACCAATGCTTTGCTTAGCTGCATGCGAGCTCGTGGGGGGACAAGAGTCAACCGCAATGTCCGCTGCATGTGCGATTGAGATGCTCCACGCGTCGTCTCTCATCCTAGACGACCTCCCTTGTATGGACAACGACAGCCTCCGACGTGGAAAACCCACTAACCATATAGTCTTTGGCGAGAGTATAGCCATATTAGCTTCTCAAGCGCTCATAGCTTTGGCTGTCCAAAAGACCACGTCATCCACCTTTGCGGACGTTCCCCCAGAGAGGATTCTCAAGACCGTTCAGGAGATGGTTAAAGCAGTGGAAGGGCTTGTTGCAGGTCAACAGGCGGATTTGGCTGGAGAAGCTGTTATGGGAGCTATAATGGGAGGTGGGTCTGATGAAGAGATTGAGAGGCTTCGGAGTTACGCAAGATGTATTGGGTTAATGTTTCAGGTTGTGGACGATGTGCTTGATGTGACCAAATCGTCGGAAGAGCTCGGGAAAACCGCCGGTAAAGATTTGATCGCCGGAAAACTGACGTATCCGAGACTGATGGGAGTGGAGAAATCGAAAGAATATGCTGAGAGATTGAACATAGAAGCGCGGGAACATCTTCTAGGGTTTGATATAGACAAGGTGGCTCCTTTGGTGTCTCTCGCTGATTACATTGTCAACAGACAAAACTGA
CDS Sequence
- >AT3G20160.2
ATGGAAAATCGAGAAGTTTTTGTTTACATTGTCATCTCCATCTTCCGCTCTCTCCAATTCTTGTTTTGGAGATTCCGTCCACGTTACAATGATGTTACGTCTGCGTTGACCCGCCCTCTGACTTCGGCCGCAAGCTATGATTTTAAGTTCATGTCGTATATGGTCAATAAGGCTAAGTCCGTCAATAAAGCACTAGAAGAGGCTGTTCCTCTCCGCGAGCCAGAACTCAAGATCCGTGAGGCCATGAGGTACACGCTTCTCTCCGATGGGAAGCGTGTAAGACCAATGCTTTGCTTAGCTGCATGCGAGCTCGTGGGGGGACAAGAGTCAACCGCAATGTCCGCTGCATGTGCGATTGAGATGCTCCACGCGTCGTCTCTCATCCTAGACGACCTCCCTTGTATGGACAACGACAGCCTCCGACGTGGAAAACCCACTAACCATATAGTCTTTGGCGAGAGTATAGCCATATTAGCTTCTCAAGCGCTCATAGCTTTGGCTGTCCAAAAGACCACGTCATCCACCTTTGCGGACGTTCCCCCAGAGAGGATTCTCAAGACCGTTCAGGAGATGGTTAAAGCAGTGGAAGGGCTTGTTGCAGGTCAACAGGCGGATTTGGCTGGAGAAGCTGTTATGGGAGCTATAATGGGAGGTGGGTCTGATGAAGAGATTGAGAGGCTTCGGAGTTACGCAAGATGTATTGGGTTAATGTTTCAGGTTGTGGACGATGTGCTTGATGTGACCAAATCGTCGGAAGAGCTCGGGAAAACCGCCGGTAAAGATTTGATCGCCGGAAAACTGACGTATCCGAGACTGATGGGAGTGGAGAAATCGAAAGAATATGCTGAGAGATTGAACATAGAAGCGCGGGAACATCTTCTAGGGTTTGATATAGACAAGGTGGCTCCTTTGGTGTCTCTCGCTGATTACATTGTCAACAGACAAAACTGA - >AT3G20160.1
ATGGAAAATCGAGAAGTTTTTGTTTACATTGTCATCTCCATCTTCCGCTCTCTCCAATTCTTGTTTTGGAGATTCCGTCCACGTTACAATGATGTTACGTCTGCGTTGACCCGCCCTCTGACTTCGGCCGCAAGCTATGATTTTAAGTTCATGTCGTATATGGTCAATAAGGCTAAGTCCGTCAATAAAGCACTAGAAGAGGCTGTTCCTCTCCGCGAGCCAGAACTCAAGATCCGTGAGGCCATGAGGTACACGCTTCTCTCCGATGGGAAGCGTGTAAGACCAATGCTTTGCTTAGCTGCATGCGAGCTCGTGGGGGGACAAGAGTCAACCGCAATGTCCGCTGCATGTGCGATTGAGATGCTCCACGCGTCGTCTCTCATCCTAGACGACCTCCCTTGTATGGACAACGACAGCCTCCGACGTGGAAAACCCACTAACCATATAGTCTTTGGCGAGAGTATAGCCATATTAGCTTCTCAAGCGCTCATAGCTTTGGCTGTCCAAAAGACCACGTCATCCACCTTTGCGGACGTTCCCCCAGAGAGGATTCTCAAGACCGTTCAGGAGATGGTTAAAGCAGTGGAAGGGCTTGTTGCAGGTCAACAGGCGGATTTGGCTGGAGAAGCTGTTATGGGAGCTATAATGGGAGGTGGGTCTGATGAAGAGATTGAGAGGCTTCGGAGTTACGCAAGATGTATTGGGTTAATGTTTCAGGTTGTGGACGATGTGCTTGATGTGACCAAATCGTCGGAAGAGCTCGGGAAAACCGCCGGTAAAGATTTGATCGCCGGAAAACTGACGTATCCGAGACTGATGGGAGTGGAGAAATCGAAAGAATATGCTGAGAGATTGAACATAGAAGCGCGGGAACATCTTCTAGGGTTTGATATAGACAAGGTGGCTCCTTTGGTGTCTCTCGCTGATTACATTGTCAACAGACAAAACTGA
Protein Sequence
- >AT3G20160.2
MENREVFVYIVISIFRSLQFLFWRFRPRYNDVTSALTRPLTSAASYDFKFMSYMVNKAKSVNKALEEAVPLREPELKIREAMRYTLLSDGKRVRPMLCLAACELVGGQESTAMSAACAIEMLHASSLILDDLPCMDNDSLRRGKPTNHIVFGESIAILASQALIALAVQKTTSSTFADVPPERILKTVQEMVKAVEGLVAGQQADLAGEAVMGAIMGGGSDEEIERLRSYARCIGLMFQVVDDVLDVTKSSEELGKTAGKDLIAGKLTYPRLMGVEKSKEYAERLNIEAREHLLGFDIDKVAPLVSLADYIVNRQN - >AT3G20160.1
MENREVFVYIVISIFRSLQFLFWRFRPRYNDVTSALTRPLTSAASYDFKFMSYMVNKAKSVNKALEEAVPLREPELKIREAMRYTLLSDGKRVRPMLCLAACELVGGQESTAMSAACAIEMLHASSLILDDLPCMDNDSLRRGKPTNHIVFGESIAILASQALIALAVQKTTSSTFADVPPERILKTVQEMVKAVEGLVAGQQADLAGEAVMGAIMGGGSDEEIERLRSYARCIGLMFQVVDDVLDVTKSSEELGKTAGKDLIAGKLTYPRLMGVEKSKEYAERLNIEAREHLLGFDIDKVAPLVSLADYIVNRQN