Information report for AT3G20060
Gene Details
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Functional Descriptions
- PO:0000084 — plant sperm cell — célula espermática o esperma (Spanish, exact), male gamete (exact), microgamete (exact), 植物精子細胞 (Japanese, exact), sperm nucleus (related), sperm cell (broad)
- PO:0025195 — pollen tube cell — célula del tubo polínico (Spanish, exact), 花粉管細胞 (Japanese, exact)
- PO:0025281 — pollen — polen (Spanish, exact), pollen grain (exact), 花粉 (Japanese, exact)
Functional Keywords
Literature and News
- Ubiquitylation in plants: a post-genomic look at a post-translational modification. DOI: 10.1016/s1360-1385(01)02080-5 ; PMID: 11590065
- Molecular characterization of plant ubiquitin-conjugating enzymes belonging to the UbcP4/E2-C/UBCx/UbcH10 gene family. DOI: 10.1104/pp.011353 ; PMID: 12427990
- Genomic evidence for COP1 as a repressor of light-regulated gene expression and development in Arabidopsis. DOI: 10.1105/tpc.004416 ; PMID: 12368493
- Inactivation of the chloroplast ATP synthase gamma subunit results in high non-photochemical fluorescence quenching and altered nuclear gene expression in Arabidopsis thaliana. DOI: 10.1074/jbc.M308435200 ; PMID: 14576160
- Arabidopsis anaphase-promoting complexes: multiple activators and wide range of substrates might keep APC perpetually busy. DOI: 1856 ; PMID: 15970679
- Genome analysis and functional characterization of the E2 and RING-type E3 ligase ubiquitination enzymes of Arabidopsis. DOI: 10.1104/pp.105.067983 ; PMID: 16339806
- The EAR-motif of the Cys2/His2-type zinc finger protein Zat7 plays a key role in the defense response of Arabidopsis to salinity stress. DOI: 10.1074/jbc.M611093200 ; PMID: 17259181
- Transcriptome analyses show changes in gene expression to accompany pollen germination and tube growth in Arabidopsis. DOI: 10.1104/pp.108.126375 ; PMID: 18775970
- Wheat germ-based protein libraries for the functional characterisation of the Arabidopsis E2 ubiquitin conjugating enzymes and the RING-type E3 ubiquitin ligase enzymes. DOI: 10.1186/s12870-015-0660-9 ; PMID: 26556605
- LOWER TEMPERATURE 1 Enhances ABA Responses and Plant Drought Tolerance by Modulating the Stability and Localization of C2-Domain ABA-Related Proteins in Arabidopsis. DOI: 10.1016/j.molp.2019.05.002 ; PMID: 31102784
- UBC19 is a new interacting protein of ORANGE for its nuclear localization in Arabidopsis thaliana. DOI: 10.1080/15592324.2021.1964847 ; PMID: 34405771
Gene Resources
- UniProt: A0A178V7W3
- EMBL: CACRSJ010000106, CACSHJ010000089, LR881468
- AlphaFoldDB: A0A178V7W3
- EnsemblPlants: AT3G20060.1
- Gramene: AT3G20060.1
- KEGG: ath:AT3G20060
- ExpressionAtlas: AT3G20060
- InterPro: IPR000608, IPR016135, IPR023313
- PANTHER: PTHR24067
- SUPFAM: SSF54495
- PROSITE: PS00183, PS50127
- Gene3D: 3.10.110.10
- OrthoDB: A0A178V7W3
- SWISS-MODEL: A0A178V7W3
- Conserved Domain Database: cd23791
Homologs
- Brachypodium distachyon BRADI_2g33600v3
- Oryza sativa LOC_Os05g08960
- Triticum aestivum TraesCS1B02G140300
Sequences
cDNA Sequence
- >AT3G20060.1
CGACGACGTTTCTTGTGTCGTACACGTTTTATAACCCAGACCCACGTCTCTCTCTCTCAAAGAAGAGAAGAAGAACTCTCTCTCTATCTCTATCTCTATCTCTCTTCTCCTTCTTCTTCAGTTTCGATCATTCTTGAATCTGATTCTTCTCGAGAAAAAAGCGTTTCAATTTCAGAAATTTCGACTACGATTGTTGCTTTGTTCAATTAGAAGAGGCGAAAAAGGATGGCGACGGTTAATGGGTACACAGGGAATACTCCGGCGGCGACTACACCGGCAGCCACCGGATCAAAGCAATCTGCTCCTCCGACTAAGACCGTCGATAGCCACTCCGTTCTAAAAAGGCTGCAATCTGAACTAATGGGATTGATGATGGGAGCTGATCCGGGGATATCTGCGTTTCCAGAGGAAGACAACATATTTTGCTGGAAAGGAACAATTACAGGAAGCAAAGATACTGTGTTCGAAGGAACTGAGTACAGACTCTCACTCACTTTCTCTAACGATTATCCTTTTAAGTCTCCCAAAGTTAAGTTTGAGACATGCTGCTTCCACCCCAATGTGGATCTCTATGGCAATATTTGCTTGGACATTCTTCAGGATAAATGGTCATCTGCTTATGATGTGAGGACGATATTACTCTCAATTCAAAGCCTTCTCGGAGAACCGAACATCAGCTCACCATTGAACAATCAAGCGGCTCAGCTTTGGAGCAATCAAGAAGAGTACAGGAAGATGGTTGAGAAGCTCTACAAGCCTTTAAACGCATGATTCTCAAAAATCACTGTAACTGATTTTAAAATCTCAACTGTATTGGATCATATCTCTTTTACTTTTATAATCTCAATTTGAGCCAATATTAGCAATCAAACTCTACCTTTATTACAGTTCCACAATCACCACCTATATCTCTTCCGTAACTGAGATTTGAGAAGTTCATAATAGTAACTCTGAAATGTTGTAGTAAGTATCTGAAAGTATAATACAAAAAAAAGTTTCTG - >AT3G20060.2
CGACGACGTTTCTTGTGTCGTACACGTTTTATAACCCAGACCCACGTCTCTCTCTCTCAAAGAAGAGAAGAAGAACTCTCTCTCTATCTCTATCTCTATCTCTCTTCTCCTTCTTCTTCAGTTTCGATCATTCTTGAATCTGATTCTTCTCGAGAAAAAAGCGTTTCAATTTCAGAAATTTCGACTACGATTGTTGCTTTGTTCAATTAGAAGAGGCGAAAAAGGATGGCGACGGTTAATGGGTACACAGGGAATACTCCGGCGGCGACTACACCGGCAGCCACCGGATCAAAGCAATCTGCTCCTCCGACTAAGACCGTCGATAGCCACTCCGTTCTAAAAAGGCTGCAATCTGAACTAATGGGATTGATGATGGGAGCTGATCCGGGGATATCTGCGTTTCCAGAGGAAGACAACATATTTTGCTGGAAAGGAACAATTACAGGAAGCAAAGATACTGTGTTCGAAGGAACTGAGTACAGACTCTCACTCACTTTCTCTAACGATTATCCTTTTAAGTCTCCCAAAGTTAAGTTTGAGACATGCTGCTTCCACCCCAATGTGGATCTCTATGGCAATATTTGCTTGGACATTCTTCAGGATAAATGGTCATCTGCTTATGATGTGAGGACGATATTACTCTCAATTCAAAGCCTTCTCGGAGAACCGAACATCAGCTCACCATTGAACAATCAAGCGGCTCAGCTTTGGAGCAATCAAGAAGAGTACAGGAAGATGGTTGAGAAGCTCTACAAGCCTTTAAACGCATGATTCTCAAAAATCACTGTAACTGATTTTAAAATCTCAACTGTATTGGATCATATCTCTTTTACTTTTATAATCTCAATTTGAGCCAATATTAGCAATCAAACTCTACCTTTATTACAGTTCCACAATCACCACCTATATCTCTTCCGTAACTGAGATTTGAGAAGTTCATAATAGTAACTCTGAAATGTTGTAGTAAGTATCTGAAAGTATAATACAAAAAAAAGTTTCTG
CDS Sequence
- >AT3G20060.1
ATGGCGACGGTTAATGGGTACACAGGGAATACTCCGGCGGCGACTACACCGGCAGCCACCGGATCAAAGCAATCTGCTCCTCCGACTAAGACCGTCGATAGCCACTCCGTTCTAAAAAGGCTGCAATCTGAACTAATGGGATTGATGATGGGAGCTGATCCGGGGATATCTGCGTTTCCAGAGGAAGACAACATATTTTGCTGGAAAGGAACAATTACAGGAAGCAAAGATACTGTGTTCGAAGGAACTGAGTACAGACTCTCACTCACTTTCTCTAACGATTATCCTTTTAAGTCTCCCAAAGTTAAGTTTGAGACATGCTGCTTCCACCCCAATGTGGATCTCTATGGCAATATTTGCTTGGACATTCTTCAGGATAAATGGTCATCTGCTTATGATGTGAGGACGATATTACTCTCAATTCAAAGCCTTCTCGGAGAACCGAACATCAGCTCACCATTGAACAATCAAGCGGCTCAGCTTTGGAGCAATCAAGAAGAGTACAGGAAGATGGTTGAGAAGCTCTACAAGCCTTTAAACGCATGA - >AT3G20060.2
ATGGCGACGGTTAATGGGTACACAGGGAATACTCCGGCGGCGACTACACCGGCAGCCACCGGATCAAAGCAATCTGCTCCTCCGACTAAGACCGTCGATAGCCACTCCGTTCTAAAAAGGCTGCAATCTGAACTAATGGGATTGATGATGGGAGCTGATCCGGGGATATCTGCGTTTCCAGAGGAAGACAACATATTTTGCTGGAAAGGAACAATTACAGGAAGCAAAGATACTGTGTTCGAAGGAACTGAGTACAGACTCTCACTCACTTTCTCTAACGATTATCCTTTTAAGTCTCCCAAAGTTAAGTTTGAGACATGCTGCTTCCACCCCAATGTGGATCTCTATGGCAATATTTGCTTGGACATTCTTCAGGATAAATGGTCATCTGCTTATGATGTGAGGACGATATTACTCTCAATTCAAAGCCTTCTCGGAGAACCGAACATCAGCTCACCATTGAACAATCAAGCGGCTCAGCTTTGGAGCAATCAAGAAGAGTACAGGAAGATGGTTGAGAAGCTCTACAAGCCTTTAAACGCATGA
Protein Sequence
- >AT3G20060.1
MATVNGYTGNTPAATTPAATGSKQSAPPTKTVDSHSVLKRLQSELMGLMMGADPGISAFPEEDNIFCWKGTITGSKDTVFEGTEYRLSLTFSNDYPFKSPKVKFETCCFHPNVDLYGNICLDILQDKWSSAYDVRTILLSIQSLLGEPNISSPLNNQAAQLWSNQEEYRKMVEKLYKPLNA - >AT3G20060.2
MATVNGYTGNTPAATTPAATGSKQSAPPTKTVDSHSVLKRLQSELMGLMMGADPGISAFPEEDNIFCWKGTITGSKDTVFEGTEYRLSLTFSNDYPFKSPKVKFETCCFHPNVDLYGNICLDILQDKWSSAYDVRTILLSIQSLLGEPNISSPLNNQAAQLWSNQEEYRKMVEKLYKPLNA