Information report for AT3G20050
Gene Details
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Functional Descriptions
- PO:0005020 — vascular bundle — haz vascular (Spanish, exact), vein (exact), 維管束 (Japanese, exact)
- PO:0000084 — plant sperm cell — célula espermática o esperma (Spanish, exact), male gamete (exact), microgamete (exact), 植物精子細胞 (Japanese, exact), sperm nucleus (related), sperm cell (broad)
Functional Keywords
Literature and News
- Evaluation of two-dimensional electrophoresis and liquid chromatography–tandem mass spectrometry for tissue-specific protein profiling of laser-microdissected plant samples. DOI: 10.1002/elps.200410399 ; PMID: 15971193
- Functional characterization of chaperonin containing T-complex polypeptide-1 and its conserved and novel substrates in Arabidopsis. DOI: 10.1093/jxb/erz099 ; PMID: 30825377
- Capturing the phosphorylation and protein interaction landscape of the plant TOR kinase. DOI: 10.1038/s41477-019-0378-z ; PMID: 30833711
- A genetic approach reveals different modes of action of prefoldins. DOI: 10.1093/plphys/kiab348 ; PMID: 34618031
- Evaluation of two-dimensional electrophoresis and liquid chromatography–tandem mass spectrometry for tissue-specific protein profiling of laser-microdissected plant samples. DOI: 10.1002/elps.200410399 ; PMID: 15971193
- Analysis of protein complexes in Arabidopsis leaves using size exclusion chromatography and label-free protein correlation profiling. DOI: 10.1016/j.jprot.2017.06.004 ; PMID: 28627464
Gene Resources
- UniProt: A0A178VBD4
- EMBL: CACSHJ010000089, LUHQ01000003
- AlphaFoldDB: A0A178VBD4
- EnsemblPlants: AT3G20050.1
- Gramene: AT3G20050.1
- KEGG: ath:AT3G20050
- Orthologous matrix: RGPNDYQ
- ExpressionAtlas: AT3G20050
- InterPro: IPR002194, IPR002423, IPR012715
- PANTHER: PTHR11353
- SUPFAM: SSF48592, SSF52029, SSF54849
- PROSITE: PS00750, PS00751, PS00995
- Gene3D: 1.10.560.10, 3.30.260.10, 3.50.7.10
- OrthoDB: A0A178VBD4
- SWISS-MODEL: A0A178VBD4
- Conserved Domain Database: cd03335
Homologs
- Gossypium hirsutum GHCU
Sequences
cDNA Sequence
- >AT3G20050.1
GAAAGTTAAAAACCCGCCGGAGTCTCTCACTCTCACAAACTTTTGAGAAGCATTTTCGCTTCAATTCAATAAAAGGCGAAAAATCTCTCACTGCACTTTATCTCGAGAGCTCAGATCTCCGATCTAGAGCCTTTCGCTTCTCCTCTTCTGTTCATATAACAACTGAATAATGTCGATCTCCGCCCAAAATCCGGATATTTCCGGCGATAGACAATCCGGCCAAGATGTTCGTACTCAGAACGTGATGGCTTGTCAAGCTGTTTCTAATATTGTTAAGACCTCACTTGGTCCCGTCGGCCTCGACAAGATGTTGGTGGATGATATTGGTGATGTGACTATTACAAATGATGGTGCTACTATTCTTAGGATGTTGGAGGTCGAGCACCCTGCTGCTAAGGTTCTTGTCGAGTTAGCTGAACTTCAAGATAGAGAAGTCGGTGATGGGACTACATCTGTTGTTATTGTAGCTGCTGAGTTGTTGAAGAGGGCAAATGATTTGGTCAGGAACAAAATACATCCAACATCAATTATCAGTGGATATAGGCTAGCAATGAGAGAATCTTGCAAATACATAGAAGAGAAGTTGGTGACCAAGGTCGAAAAGCTTGGGAAAGTTCCATTGATAAACTGTGCCAAAACCAGCATGTCCTCCAAACTGATATCTGGTGACAGCGACTTCTTTGCCAATTTGGTTGTGGAAGCCGTTCTTTCAGTAAAGATGACAAATCAGCGGGGAGAGATAAAATACCCTATCAAGGGCATTAATATTCTGAAAGCTCATGGACAAAGTGCAAGAGACAGCTATTTGTTAAATGGATATGCACTCAATACTGGTCGTGCTGCCCAAGGGATGCCATTACGAGTGTCCCCAGCAAAGATTGCTTGCCTTGACTTCAATCTGCAGAAGACAAAAATGCAGCTGGGTGTCCAAGTTGTTGTTAATGACCCACGAGAACTTGAAAAGATCCGTCAAAGAGAAGCTGACATGACAAAAGAGCGGATAGAGAAACTTCTCAAAGCTGGGGCCAATGTAATTCTGACCACAAAGGGGATTGACGACATGGCACTTAAATACTTTGTAGAGGCAGGAGCTATTGCTGTTAGGCGTGTGCGCAAAGAAGACATGCGTCATGTTGCCAAGGCGACAGGAGCGACTCTGGTCACCACTTTTGCTGACATGGAGGGCGAAGAAACATTTGATCCAGCTCACCTTGGATCTGCTGATGAGGTTGTTGAAGAGAGAATCGCAGATGATGATGTTATATTGATAAAGGGAACCAAAACAAGTAGTGCGGTCTCGTTGATCTTAAGAGGTGCAAATGACTACATGCTTGATGAGATGGAGAGAGCACTGCATGACGCTTTATGTATTGTCAAGAGGACCCTTGAGTCCAACACGGTGGTTGCGGGTGGAGGTGCAGTTGAATCAGCATTGTCTGTGTATCTGGAGCACCTTGCTACAACCTTGGGCTCTCGCGAACAATTGGCCATCGCTGAATTTGCTGATGCGCTATTGATTATACCAAAGGTGCTTGCAGTAAACGCTGCTAAGGATGCAACCGAATTGGTAGCTAAACTAAGAGCGTACCACCACACTGCACAAACCAAGGCTGATAAGAAGCACTATTCAAGCATGGGACTTGACCTCGTAAACGGAACCATCCGCAACAATTTGGAAGCTGGAGTGATCGAACCAGCTATGAGCAAAGTGAAAATTATCCAGTTTGCAACAGAGGCAGCCATAACGATTCTACGAATTGACGACATGATCAAACTGGTGAAGGATGAGAGCCAAGGCGAAGAATAAGCAAAGCTCAGCTCCTCTTTATCCGCCTTATCATCCTTAGTGTGTGTTTTTGTCCGCATTTTCAGCTCCTCTTTAGCTTCTTTTTTGCGCTGTAACAATGTAGCCTCTGAAAGAGCTGTTTCTGTTTATTTTTCAACTCTCTCGTTTCTTGCTCACTTTTTACTTCAAGAAATTTTTGCTTTTTGTCGGGTAACGCATGTAATGAAGTTGGGCTTTCGTCTCTTACTGTTTGAATTTATGGTGTAGTTTTTGAATGTCCTCTCTCACACAATGACACAAAGATTTATCCCCAAAAGATTAGGTTTCACTGTTCTGTATTAATTCCGTTGCACTAACAAGTCATTTTTTGTTGTTGTAAATAAACTGTAATTTACTTAATCATGAG
CDS Sequence
- >AT3G20050.1
ATGTCGATCTCCGCCCAAAATCCGGATATTTCCGGCGATAGACAATCCGGCCAAGATGTTCGTACTCAGAACGTGATGGCTTGTCAAGCTGTTTCTAATATTGTTAAGACCTCACTTGGTCCCGTCGGCCTCGACAAGATGTTGGTGGATGATATTGGTGATGTGACTATTACAAATGATGGTGCTACTATTCTTAGGATGTTGGAGGTCGAGCACCCTGCTGCTAAGGTTCTTGTCGAGTTAGCTGAACTTCAAGATAGAGAAGTCGGTGATGGGACTACATCTGTTGTTATTGTAGCTGCTGAGTTGTTGAAGAGGGCAAATGATTTGGTCAGGAACAAAATACATCCAACATCAATTATCAGTGGATATAGGCTAGCAATGAGAGAATCTTGCAAATACATAGAAGAGAAGTTGGTGACCAAGGTCGAAAAGCTTGGGAAAGTTCCATTGATAAACTGTGCCAAAACCAGCATGTCCTCCAAACTGATATCTGGTGACAGCGACTTCTTTGCCAATTTGGTTGTGGAAGCCGTTCTTTCAGTAAAGATGACAAATCAGCGGGGAGAGATAAAATACCCTATCAAGGGCATTAATATTCTGAAAGCTCATGGACAAAGTGCAAGAGACAGCTATTTGTTAAATGGATATGCACTCAATACTGGTCGTGCTGCCCAAGGGATGCCATTACGAGTGTCCCCAGCAAAGATTGCTTGCCTTGACTTCAATCTGCAGAAGACAAAAATGCAGCTGGGTGTCCAAGTTGTTGTTAATGACCCACGAGAACTTGAAAAGATCCGTCAAAGAGAAGCTGACATGACAAAAGAGCGGATAGAGAAACTTCTCAAAGCTGGGGCCAATGTAATTCTGACCACAAAGGGGATTGACGACATGGCACTTAAATACTTTGTAGAGGCAGGAGCTATTGCTGTTAGGCGTGTGCGCAAAGAAGACATGCGTCATGTTGCCAAGGCGACAGGAGCGACTCTGGTCACCACTTTTGCTGACATGGAGGGCGAAGAAACATTTGATCCAGCTCACCTTGGATCTGCTGATGAGGTTGTTGAAGAGAGAATCGCAGATGATGATGTTATATTGATAAAGGGAACCAAAACAAGTAGTGCGGTCTCGTTGATCTTAAGAGGTGCAAATGACTACATGCTTGATGAGATGGAGAGAGCACTGCATGACGCTTTATGTATTGTCAAGAGGACCCTTGAGTCCAACACGGTGGTTGCGGGTGGAGGTGCAGTTGAATCAGCATTGTCTGTGTATCTGGAGCACCTTGCTACAACCTTGGGCTCTCGCGAACAATTGGCCATCGCTGAATTTGCTGATGCGCTATTGATTATACCAAAGGTGCTTGCAGTAAACGCTGCTAAGGATGCAACCGAATTGGTAGCTAAACTAAGAGCGTACCACCACACTGCACAAACCAAGGCTGATAAGAAGCACTATTCAAGCATGGGACTTGACCTCGTAAACGGAACCATCCGCAACAATTTGGAAGCTGGAGTGATCGAACCAGCTATGAGCAAAGTGAAAATTATCCAGTTTGCAACAGAGGCAGCCATAACGATTCTACGAATTGACGACATGATCAAACTGGTGAAGGATGAGAGCCAAGGCGAAGAATAA
Protein Sequence
- >AT3G20050.1
MSISAQNPDISGDRQSGQDVRTQNVMACQAVSNIVKTSLGPVGLDKMLVDDIGDVTITNDGATILRMLEVEHPAAKVLVELAELQDREVGDGTTSVVIVAAELLKRANDLVRNKIHPTSIISGYRLAMRESCKYIEEKLVTKVEKLGKVPLINCAKTSMSSKLISGDSDFFANLVVEAVLSVKMTNQRGEIKYPIKGINILKAHGQSARDSYLLNGYALNTGRAAQGMPLRVSPAKIACLDFNLQKTKMQLGVQVVVNDPRELEKIRQREADMTKERIEKLLKAGANVILTTKGIDDMALKYFVEAGAIAVRRVRKEDMRHVAKATGATLVTTFADMEGEETFDPAHLGSADEVVEERIADDDVILIKGTKTSSAVSLILRGANDYMLDEMERALHDALCIVKRTLESNTVVAGGGAVESALSVYLEHLATTLGSREQLAIAEFADALLIIPKVLAVNAAKDATELVAKLRAYHHTAQTKADKKHYSSMGLDLVNGTIRNNLEAGVIEPAMSKVKIIQFATEAAITILRIDDMIKLVKDESQGEE