Information report for AT3G20040
Gene Details
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Functional Descriptions
- PO:0009029 — stamen — estambre (Spanish, exact), 雄蕊 (Japanese, exact), Poaceae stamen (narrow), Zea stamen (narrow)
- PO:0025281 — pollen — polen (Spanish, exact), pollen grain (exact), 花粉 (Japanese, exact)
- PO:0009001 — fruit — frucht (exact, German), fruto (exact, Spanish), 果実 (exact, Japanese), coenocarp (narrow), syncarp (narrow), aggregate fruit (broad), compound fruit (broad), dehiscent fruit (broad), diaspore (broad), indehiscent fruit (broad), multiple fruit (broad), propagule (broad)
- PO:0009005 — root — raíz (Spanish, exact), radices (exact, plural), radix (exact), 根 (Japanese, exact), aerial root (narrow), climbing root (narrow)
- PO:0009025 — vascular leaf — foliage leaf (exact), hoja vascular (Spanish, exact), leaf, vascular (exact), vascular leaves (exact, plural), 維管束のある葉, または維管束植物の葉 (Japanese, exact), crozier (related), macrophyll (related), megaphyll (related), ascidia (narrow), ascidium (narrow), fiddlehead (narrow), frond (narrow), needle-like leaf (narrow), pitcher (narrow), pitcher blade (narrow), pitcher-blade (narrow), scale-like leaf (narrow), sterile frond (narrow), trophophyll (narrow)
- PO:0009046 — flower — flor (Spanish, exact), 花 (Japanese, exact), floret (related), Asteraceae floret (narrow), basal flower (narrow), double flower (narrow), hermaphrodite flower (narrow), monoclinous flower (narrow), perfect flower (narrow)
- PO:0009047 — stem — caña (Spanish, exact), culm (exact), eje primario (Spanish, exact), primary axis (exact), primary stem (exact), tallo (Spanish, exact), tronco (Spanish, exact), 茎 (Japanese, exact), bole (narrow), cane (narrow), caudex (narrow), caudices (narrow), core (narrow), primocane (narrow), scape (narrow), stalk (narrow), trunk (narrow)
- PO:0000084 — plant sperm cell — célula espermática o esperma (Spanish, exact), male gamete (exact), microgamete (exact), 植物精子細胞 (Japanese, exact), sperm nucleus (related), sperm cell (broad)
- PO:0025195 — pollen tube cell — célula del tubo polínico (Spanish, exact), 花粉管細胞 (Japanese, exact)
Functional Keywords
- stamen , pollen , fruit , root , vascular leaf , flower , stem , plant sperm cell , pollen tube cell , pollen
Literature and News
- A novel type of chloroplast stromal hexokinase is the major glucose-phosphorylating enzyme in the moss Physcomitrella patens. DOI: 10.1074/jbc.M306265200 ; PMID: 12941966
- Inactivation of the chloroplast ATP synthase gamma subunit results in high non-photochemical fluorescence quenching and altered nuclear gene expression in Arabidopsis thaliana. DOI: 10.1074/jbc.M308435200 ; PMID: 14576160
- Experimental analysis of the Arabidopsis mitochondrial proteome highlights signaling and regulatory components, provides assessment of targeting prediction programs, and indicates plant-specific mitochondrial proteins. DOI: 10.1105/tpc.016055 ; PMID: 14671022
- Integrative analyses of genetic variation in enzyme activities of primary carbohydrate metabolism reveal distinct modes of regulation in Arabidopsis thaliana. DOI: 10.1186/gb-2008-9-8-r129 ; PMID: 18710526
- Transcriptome analyses show changes in gene expression to accompany pollen germination and tube growth in Arabidopsis. DOI: 10.1104/pp.108.126375 ; PMID: 18775970
- Multiple lines of evidence localize signaling, morphology, and lipid biosynthesis machinery to the mitochondrial outer membrane of Arabidopsis. DOI: 10.1104/pp.111.183160 ; PMID: 21896887
- Experimental analysis of the Arabidopsis mitochondrial proteome highlights signaling and regulatory components, provides assessment of targeting prediction programs, and indicates plant-specific mitochondrial proteins. DOI: 10.1105/tpc.016055 ; PMID: 14671022
- Isozymes of plant hexokinase: occurrence, properties and functions. DOI: 10.1016/j.phytochem.2006.12.001 ; PMID: 17234224
Gene Resources
- UniProt: A0A178VNP2
- EMBL: CACSHJ010000089, LUHQ01000003
- AlphaFoldDB: A0A178VNP2
- EnsemblPlants: AT3G20040.1
- Gramene: AT3G20040.1
- KEGG: ath:AT3G20040
- Orthologous matrix: TNIRVCD
- ExpressionAtlas: AT3G20040
- InterPro: IPR001312, IPR022672, IPR022673
- PANTHER: PTHR19443, PTHR19443:SF6
- SUPFAM: SSF53067
- PROSITE: PS51257, PS51748
- Gene3D: 3.30.420.40, 3.40.367.20
- OrthoDB: A0A178VNP2
- SWISS-MODEL: A0A178VNP2
- Conserved Domain Database: cd24020
Homologs
- Actinidia chinensis CEY00_Acc23282
- Citrullus lanatus Cla97C11G208480
- Cucumis melo MELO3C004591
- Cucumis sativus CsGy2G000760
- Glycine max Glyma.08G033300, Glyma.05G226600
- Medicago truncatula Medtr8g102460
- Musa acuminata Ma03_g32880, Ma03_g16610
- Oryza sativa SNG1;OsHXK3
- Rosa chinensis RchiOBHm_Chr2g0091971
Sequences
cDNA Sequence
- >AT3G20040.1
CAACCAAATAACAAATAAAAACAAGCGAATCGAAACCGTCCATATAACTCAAAAAGTACACGAGGGTATAACTGTCATTTCATAAATATTCATGTATTATTCATCGATTCGTTTGGCCTTTCCAGCGTCCTTCTTCTGACTCTTACCAAAATTTTATCAATCTCTCCCTCGCCGCGCCTTTTCGCCGGAAGGACATAACTTTTACCGGGATTTGTTGTCTACAAGGGAACCTCGAGCGCAAGGCTGTTTAATCGGAAGAATCTGGAGTCACGGAGAAGCAAAAATGAACAAAAAGAGAGACCCTTTATGCTGAGACGGTTTAATTTTGTATCTGTGGTTATAGAAAGGAATCGTTTGCGATGAAATGGAGCCTTATAGGGTTATTCTGATCGGTGGTTGAAGCGTTGTCATTTGCATTTCGTGTCATTCTGGTTATAGACTCTGTTTCAATTGCTTCTCGTCGTAAAGGCGTTTGCTTTTGTGAGTAATTTATCTCGATTCTTCTGAAAGACGTAGAAAGAGAGAAGGTTGTGTATAGATATTGGAAATGGGGAAGGTTTTGGTGATGTTGACGGCAGCTGCGGCTGTGGTGGCTTGTTCAGTGGCGACTGTGATGGTGAGAAGGAGGATGAAAGGGAGGAGGAAATGGAGGAGGGTGGTGGGTTTACTTAAGGATTTGGAGGAAGCTTGTGAGACGCCTTTAGGAAGGTTGAGGCAGATGGTTGATGCCATAGCTGTGGAGATGCAAGCTGGTTTGGTTTCTGAAGGAGGGTCAAAGCTTAAAATGTTGCTCACTTTTGTTGATGATCTTCCCAATGGGAGCGAGACAGGAACCTATTATGCACTTCATCTTGGAGGCTCCTACTTTAGGATAATAAAGGTTCATCTAGGTGGTCAAAGATCATCTCTTGAAGTTCAAGATGTTGAACGACATTCCATACCAACATCTTTGATGAATAGCACTAGCGAGGTTCTCTTCGACTTTCTCGCATCATCCTTGCAGAGGTTTATTGAAAAAGAAGGGAACGATTTCAGTTTGTCACAACCTTTAAAAAGGGAACTTGCGTTTACTTTTTCTTTCCCAGTCAAGCAGACATCCATCTCATCAGGAGTTCTAATTAAATGGACCAAAGGTTTTGCAATTAGTGAAATGGCTGGGGAAGACATTGCTGAATGTCTACAAGGAGCGTTGAACAAGAGAGGGCTAGATATTCGCGTTGCAGCTCTTGTGAATGATACTGTTGGGGCTTTATCCTTTGGACATTTTCATGACCCAGACACAATTGCTGCTGTTGTCTTTGGAACAGGTAGTAATGCATGTTACCTTGAACGAACTGATGCCATAATCAAGTGTCAAAATCCACGCACGACTTCTGGAAGCATGGTGGTCAATATGGAGTGGGGAAACTTTTGGTCATCTCGTCTGCCAAGAACTTCATATGACCTTGAGTTGGATGCAGAGAGTATGAATTCAAATGACATGGGCTTTGAGAAGATGATAGGAGGGATGTATCTGGGCGACATTGTCCGCAGAGTAATTCTTCGAATGTCACAAGAGTCCGACATCTTTGGACCTATCTCATCCATTTTATCCACGCCTTTCGTTCTGAGAACAAATTCTGTCTCAGCAATGCATGAAGATGACACATCCGAGTTACAAGAAGTAGCACGAATCTTGAAAGATTTAGGGGTGTCAGAGGTACCAATGAAGGTGAGGAAACTTGTAGTGAAGATCTGCGATGTAGTGACACGCAGAGCAGCTAGGCTAGCAGCAGCAGGAATTGCAGGAATCTTGAAGAAGGTAGGGAGAGATGGGAGCGGAGGAGGAAGGAGAAGCGATAAGCAGATAATGAGAAGAACAGTGGTGGCAGTTGAAGGAGGTCTGTATTTGAACTACAGGATGTTCAGAGAATATATGGACGAAGCTCTGAGAGATATACTGGGAGAAGATGTGGCTCAACACGTAGTGGTGAAGGCCATGGAAGATGGTTCCAGCATTGGCTCTGCATTGTTGCTGGCTTCGTCACAAAGTGTTCAAACAATACCATCCGTATGAATAATTTGTGTACATATTTACAATGTATATAGCCAATTGTTTTAGAAGCATGTAGGTTTGTGTAAATATTGTAGGCACTTTTTAGTTTCTTCTACTCATGATTAAGTAAATTACAGTTTAT
CDS Sequence
- >AT3G20040.1
ATGGGGAAGGTTTTGGTGATGTTGACGGCAGCTGCGGCTGTGGTGGCTTGTTCAGTGGCGACTGTGATGGTGAGAAGGAGGATGAAAGGGAGGAGGAAATGGAGGAGGGTGGTGGGTTTACTTAAGGATTTGGAGGAAGCTTGTGAGACGCCTTTAGGAAGGTTGAGGCAGATGGTTGATGCCATAGCTGTGGAGATGCAAGCTGGTTTGGTTTCTGAAGGAGGGTCAAAGCTTAAAATGTTGCTCACTTTTGTTGATGATCTTCCCAATGGGAGCGAGACAGGAACCTATTATGCACTTCATCTTGGAGGCTCCTACTTTAGGATAATAAAGGTTCATCTAGGTGGTCAAAGATCATCTCTTGAAGTTCAAGATGTTGAACGACATTCCATACCAACATCTTTGATGAATAGCACTAGCGAGGTTCTCTTCGACTTTCTCGCATCATCCTTGCAGAGGTTTATTGAAAAAGAAGGGAACGATTTCAGTTTGTCACAACCTTTAAAAAGGGAACTTGCGTTTACTTTTTCTTTCCCAGTCAAGCAGACATCCATCTCATCAGGAGTTCTAATTAAATGGACCAAAGGTTTTGCAATTAGTGAAATGGCTGGGGAAGACATTGCTGAATGTCTACAAGGAGCGTTGAACAAGAGAGGGCTAGATATTCGCGTTGCAGCTCTTGTGAATGATACTGTTGGGGCTTTATCCTTTGGACATTTTCATGACCCAGACACAATTGCTGCTGTTGTCTTTGGAACAGGTAGTAATGCATGTTACCTTGAACGAACTGATGCCATAATCAAGTGTCAAAATCCACGCACGACTTCTGGAAGCATGGTGGTCAATATGGAGTGGGGAAACTTTTGGTCATCTCGTCTGCCAAGAACTTCATATGACCTTGAGTTGGATGCAGAGAGTATGAATTCAAATGACATGGGCTTTGAGAAGATGATAGGAGGGATGTATCTGGGCGACATTGTCCGCAGAGTAATTCTTCGAATGTCACAAGAGTCCGACATCTTTGGACCTATCTCATCCATTTTATCCACGCCTTTCGTTCTGAGAACAAATTCTGTCTCAGCAATGCATGAAGATGACACATCCGAGTTACAAGAAGTAGCACGAATCTTGAAAGATTTAGGGGTGTCAGAGGTACCAATGAAGGTGAGGAAACTTGTAGTGAAGATCTGCGATGTAGTGACACGCAGAGCAGCTAGGCTAGCAGCAGCAGGAATTGCAGGAATCTTGAAGAAGGTAGGGAGAGATGGGAGCGGAGGAGGAAGGAGAAGCGATAAGCAGATAATGAGAAGAACAGTGGTGGCAGTTGAAGGAGGTCTGTATTTGAACTACAGGATGTTCAGAGAATATATGGACGAAGCTCTGAGAGATATACTGGGAGAAGATGTGGCTCAACACGTAGTGGTGAAGGCCATGGAAGATGGTTCCAGCATTGGCTCTGCATTGTTGCTGGCTTCGTCACAAAGTGTTCAAACAATACCATCCGTATGA
Protein Sequence
- >AT3G20040.1
MGKVLVMLTAAAAVVACSVATVMVRRRMKGRRKWRRVVGLLKDLEEACETPLGRLRQMVDAIAVEMQAGLVSEGGSKLKMLLTFVDDLPNGSETGTYYALHLGGSYFRIIKVHLGGQRSSLEVQDVERHSIPTSLMNSTSEVLFDFLASSLQRFIEKEGNDFSLSQPLKRELAFTFSFPVKQTSISSGVLIKWTKGFAISEMAGEDIAECLQGALNKRGLDIRVAALVNDTVGALSFGHFHDPDTIAAVVFGTGSNACYLERTDAIIKCQNPRTTSGSMVVNMEWGNFWSSRLPRTSYDLELDAESMNSNDMGFEKMIGGMYLGDIVRRVILRMSQESDIFGPISSILSTPFVLRTNSVSAMHEDDTSELQEVARILKDLGVSEVPMKVRKLVVKICDVVTRRAARLAAAGIAGILKKVGRDGSGGGRRSDKQIMRRTVVAVEGGLYLNYRMFREYMDEALRDILGEDVAQHVVVKAMEDGSSIGSALLLASSQSVQTIPSV