Information report for AT3G20000
Gene Details
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Functional Descriptions
Functional Keywords
Literature and News
- Analysis of the Arabidopsis mitochondrial proteome. DOI: 6919 ; PMID: 11743115
- Purification and characterization of the preprotein translocase of the outer mitochondrial membrane from Arabidopsis. Identification of multiple forms of TOM20. DOI: 10.1104/pp.125.2.943 ; PMID: 11161051
- Genomic and proteomic analysis of mitochondrial carrier proteins in Arabidopsis. DOI: 10.1104/pp.009985 ; PMID: 12586869
- Nuclear genes that encode mitochondrial proteins for DNA and RNA metabolism are clustered in the Arabidopsis genome. DOI: 10.1105/tpc.010009 ; PMID: 12837951
- New insights into the respiratory chain of plant mitochondria. Supercomplexes and a unique composition of complex II. DOI: 10.1104/pp.103.024620 ; PMID: 12970493
- Experimental analysis of the Arabidopsis mitochondrial proteome highlights signaling and regulatory components, provides assessment of targeting prediction programs, and indicates plant-specific mitochondrial proteins. DOI: 10.1105/tpc.016055 ; PMID: 14671022
- A transcriptomic and proteomic characterization of the Arabidopsis mitochondrial protein import apparatus and its response to mitochondrial dysfunction. DOI: 10.1104/pp.103.033910 ; PMID: 14730085
- Gene trapping with firefly luciferase in Arabidopsis. Tagging of stress-responsive genes. DOI: 10.1104/pp.103.027151 ; PMID: 14730060
- Isolation of intact vacuoles and proteomic analysis of tonoplast from suspension-cultured cells of Arabidopsis thaliana. DOI: 10.1093/pcp/pch099 ; PMID: 15215502
- Mapping the Arabidopsis organelle proteome. DOI: 10.1073/pnas.0506958103 ; PMID: 16618929
- Microarray analysis reveals altered expression of a large number of nuclear genes in developing cytoplasmic male sterile Brassica napus flowers. DOI: 10.1111/j.1365-313X.2006.02975.x ; PMID: 17217466
- Functional characterization of a glycine-rich RNA-binding protein 2 in Arabidopsis thaliana under abiotic stress conditions. DOI: 10.1111/j.1365-313X.2007.03057.x ; PMID: 17376161
- Functional definition of outer membrane proteins involved in preprotein import into mitochondria. DOI: 10.1105/tpc.107.050534 ; PMID: 17981999
- Systems analysis of seed filling in Arabidopsis: using general linear modeling to assess concordance of transcript and protein expression. DOI: 10.1104/pp.109.152413 ; PMID: 20118269
- An in silico analysis of the mitochondrial protein import apparatus of plants. DOI: 10.1186/1471-2229-10-249 ; PMID: 21078193
- Endogenous Arabidopsis messenger RNAs transported to distant tissues. DOI: 10.1038/nplants.2015.25 ; PMID: 27247031
- Plant-Specific Preprotein and Amino Acid Transporter Proteins Are Required for tRNA Import into Mitochondria. DOI: 10.1104/pp.16.01519 ; PMID: 27789739
- Genetic dissection of cyclic pyranopterin monophosphate biosynthesis in plant mitochondria. DOI: 10.1042/BCJ20170559 ; PMID: 29247140
- Arabidopsis DGD1 SUPPRESSOR1 Is a Subunit of the Mitochondrial Contact Site and Cristae Organizing System and Affects Mitochondrial Biogenesis. DOI: 10.1105/tpc.18.00885 ; PMID: 31118221
- Analysis of the Arabidopsis mitochondrial proteome. DOI: 6919 ; PMID: 11743115
- Experimental analysis of the Arabidopsis mitochondrial proteome highlights signaling and regulatory components, provides assessment of targeting prediction programs, and indicates plant-specific mitochondrial proteins. DOI: 10.1105/tpc.016055 ; PMID: 14671022
- A transcriptomic and proteomic characterization of the Arabidopsis mitochondrial protein import apparatus and its response to mitochondrial dysfunction. DOI: 10.1104/pp.103.033910 ; PMID: 14730085
- The hydrophobic proteome of mitochondrial membranes from Arabidopsis cell suspensions. DOI: 10.1016/j.phytochem.2004.03.028 ; PMID: 15276431
- Mapping the Arabidopsis organelle proteome. DOI: 10.1073/pnas.0506958103 ; PMID: 16618929
- A proteomics dissection of Arabidopsis thaliana vacuoles isolated from cell culture. DOI: 10.1074/mcp.M600250-MCP200 ; PMID: 17151019
- Functional characterization of a glycine-rich RNA-binding protein 2 in Arabidopsis thaliana under abiotic stress conditions. DOI: 10.1111/j.1365-313X.2007.03057.x ; PMID: 17376161
Gene Resources
- UniProt: A0A178V9B1
- EMBL: CACRSJ010000106, CACSHJ010000089, LUHQ01000003
- AlphaFoldDB: A0A178V9B1
- EnsemblPlants: AT3G20000.1
- Gramene: AT3G20000.1
- KEGG: ath:AT3G20000
- Orthologous matrix: TRFNYRW
- ExpressionAtlas: AT3G20000
- InterPro: IPR023614, IPR027246, IPR037930
- PANTHER: PTHR10802
- Gene3D: 2.40.160.10
- OrthoDB: A0A178V9B1
- SWISS-MODEL: A0A178V9B1
- Conserved Domain Database: cd07305
Sequences
cDNA Sequence
- >AT3G20000.1
TGGAATTAATTAGGTGCAAGACAGGCGAACGAGGGGTCCCGACACGGTTCGAGATTAAGACCAAACCGGGAAAAACCAGAAAATGGTATAATTACAAAACCCTTACCAAGACTCGCCTCCAAGCTGAAGAAAACCCTTAATTCTCTTTCTCTTGTTCCATTTCGTCCCATTTTGTTCTTTCTACTGTCGCCGTAAAGGATATTCAAAAGCGGTAGAGGCGGCGATGGCGGATCTTTTACCACCTCTTACGGCGGCACAAGTCGATGCTAAGACTAAAGTCGATGAGAAAGTCGATTACTCGAACCTCCCTTCTCCTGTTCCCTATGAGGAACTCCACCGTGAAGCTCTCATGTCTTTAAAGTCGGACAATTTTGAGGGTTTACGCTTCGACTTTACCAGGGCGTTGAATCAGAAGTTTTCTCTCAGTCATAGTGTAATGATGGGGCCAACCGAAGTTCCTGCTCAGTCACCTGAAACTACTATCAAAATTCCAACAGCCCATTATGAGTTTGGTGCCAATTATTATGACCCAAAGTTGCTGCTCATCGGAAGGGTAATGACTGATGGTAGACTAAATGCGAGACTGAAAGCAGATTTAACTGATAAGTTAGTTGTGAAGGCGAATGCTCTGATAACAAATGAGGAACATATGTCACAAGCAATGTTCAACTTTGATTACATGGGATCAGACTACAGAGCTCAGCTTCAACTTGGACAGAGTGCCCTAATTGGAGCAACTTATATCCAGAGTGTTACAAACCATTTATCCTTGGGTGGTGAAATTTTCTGGGCTGGTGTGCCTCGGAAGTCGGGAATAGGCTATGCTGCTAGATACGAGACAGATAAAATGGTTGCTTCTGGTCAAGTTGCTAGCACGGGTGCTGTTGTTATGAACTATGTTCAGAAGATTTCAGATAAGGTGTCACTTGCCACTGATTTCATGTACAACTACTTTTCAAGAGATGTAACAGCTAGTGTGGGTTATGACTATATGCTTAGACAGGCTCGTGTGCGGGGTAAGATCGATTCAAACGGTGTTGCATCCGCTCTCCTTGAAGAAAGATTGAGTATGGGACTCAATTTTCTTCTTTCTGCAGAGCTGGATCATAAGAAGAAGGACTACAAGTTTGGTTTCGGATTAACAGTTGGTTAAAAGACCGAATAAAAACCGGCACACAATAAGCCTGGCGCACAGAGCAGATTGCAGCAGTAGTGGTTTCAGCTGCGAGGATTTCGGTTAAAATTTATTCTATTTCAGTTTAGGCTTTTTGGTGAAGTTGGGAAGATAAACGGTAACGATGTTGTGTTGTTATTTGAGGTTTAGGATTTGTTTCCAAGAACCATTTTATAAAAGAAGAAGAAGCAAATGAGGTTTTTGTTTTACTTCCTTGCTCTAAGATCTCGTGAACTTCCGAGAGAGGTGTATCATTTCATTTCCTTGCCATAAAAAAAAACGAATTCTTTTTTTCTTCCTCGTTCGTTGTCTGATTTGTTGAAAATATTTTATTCGAATATAAAATCACCTGAGATTTGTTGCTTTTGACGTGGAAATATAAGA - >AT3G20000.2
TGGAATTAATTAGGTGCAAGACAGGCGAACGAGGGGTCCCGACACGGTTCGAGATTAAGACCAAACCGGGAAAAACCAGAAAATGGTATAATTACAAAACCCTTACCAAGACTCGCCTCCAAGCTGAAGAAAACCCTTAATTCTCTTTCTCTTGTTCCATTTCGTCCCATTTTGTTCTTTCTACTGTCGCCGTAAAGGATATTCAAAAGCGGTAGAGGCGGCGATGGCGGATCTTTTACCACCTCTTACGGCGGCACAAGTCGATGCTAAGACTAAAGTCGATGAGAAAGTCGATTACTCGAACCTCCCTTCTCCTGTTCCCTATGAGGAACTCCACCGTGAAGCTCTCATGTCTTTAAAGTCGGACAATTTTGAGGGTTTACGCTTCGACTTTACCAGGGCGTTGAATCAGAAGTTTTCTCTCAGTCATAGTGTAATGATGGGGCCAACCGAAGTTCCTGCTCAGTCACCTGAAACTACTATCAAAATTCCAACAGCCCATTATGAGTTTGGTGCCAATTATTATGACCCAAAGTTGCTGCTCATCGGAAGGGTAATGACTGATGGTAGACTAAATGCGAGACTGAAAGCAGATTTAACTGATAAGTTAGTTGTGAAGGCGAATGCTCTGATAACAAATGAGGAACATATGTCACAAGCAATGTTCAACTTTGATTACATGGGATCAGACTACAGAGCTCAGCTTCAACTTGGACAGAGTGCCCTAATTGGAGCAACTTATATCCAGAGTGTTACAAACCATTTATCCTTGGGTGGTGAAATTTTCTGGGCTGGTGTGCCTCGGAAGTCGGGAATAGGCTATGCTGCTAGATACGAGACAGATAAAATGGTTGCTTCTGGTCAAGTTGCTAGCACGGGTGCTGTTGTTATGAACTATGTTCAGAAGATTTCAGATAAGGTGTCACTTGCCACTGATTTCATGTACAACTACTTTTCAAGAGATGTAACAGCTAGTGTGGGTTATGACTATATGCTTAGACAGGCTCGTGTGCGGGGTAAGATCGATTCAAACGGTGTTGCATCCGCTCTCCTTGAAGAAAGATTGAGTATGGGACTCAATTTTCTTCTTTCTGCAGAGCTGGATCATAAGAAGAAGGACTACAAGTTTGGTTTCGGATTAACAGTTGGTTAAAAGACCGAATAAAAACCGGCACACAATAAGCCTGGCGCACAGAGCAGATTGCAGCAGTAGTGGTTTCAGCTGCGAGGATTTCGGTTAAAATTTATTCTATTTCAGTTTAGGCTTTTTGGTGAAGTTGGGAAGATAAACGGTAACGATGTTGTGTTGTTATTTGAGGTTTAGGATTTGTTTCCAAGAACCATTTTATAAAAGAAGAAGAAGCAAATGAGGTTTTTGTTTTACTTCCTTGCTCTAAGATCTCGTGAACTTCCGAGAGAGGTGTATCATTTCATTTCCTTGCCATAAAAAAAAACGAATTCTTTTTTTCTTCCTCGTTCGTTGTCTGATTTGTTGAAAATATTTTATTCGAATATAAAATCACCTGAGATTTGTTGCTTTTGACGTGGAAATATAAGA
CDS Sequence
- >AT3G20000.1
ATGGCGGATCTTTTACCACCTCTTACGGCGGCACAAGTCGATGCTAAGACTAAAGTCGATGAGAAAGTCGATTACTCGAACCTCCCTTCTCCTGTTCCCTATGAGGAACTCCACCGTGAAGCTCTCATGTCTTTAAAGTCGGACAATTTTGAGGGTTTACGCTTCGACTTTACCAGGGCGTTGAATCAGAAGTTTTCTCTCAGTCATAGTGTAATGATGGGGCCAACCGAAGTTCCTGCTCAGTCACCTGAAACTACTATCAAAATTCCAACAGCCCATTATGAGTTTGGTGCCAATTATTATGACCCAAAGTTGCTGCTCATCGGAAGGGTAATGACTGATGGTAGACTAAATGCGAGACTGAAAGCAGATTTAACTGATAAGTTAGTTGTGAAGGCGAATGCTCTGATAACAAATGAGGAACATATGTCACAAGCAATGTTCAACTTTGATTACATGGGATCAGACTACAGAGCTCAGCTTCAACTTGGACAGAGTGCCCTAATTGGAGCAACTTATATCCAGAGTGTTACAAACCATTTATCCTTGGGTGGTGAAATTTTCTGGGCTGGTGTGCCTCGGAAGTCGGGAATAGGCTATGCTGCTAGATACGAGACAGATAAAATGGTTGCTTCTGGTCAAGTTGCTAGCACGGGTGCTGTTGTTATGAACTATGTTCAGAAGATTTCAGATAAGGTGTCACTTGCCACTGATTTCATGTACAACTACTTTTCAAGAGATGTAACAGCTAGTGTGGGTTATGACTATATGCTTAGACAGGCTCGTGTGCGGGGTAAGATCGATTCAAACGGTGTTGCATCCGCTCTCCTTGAAGAAAGATTGAGTATGGGACTCAATTTTCTTCTTTCTGCAGAGCTGGATCATAAGAAGAAGGACTACAAGTTTGGTTTCGGATTAACAGTTGGTTAA - >AT3G20000.2
ATGGCGGATCTTTTACCACCTCTTACGGCGGCACAAGTCGATGCTAAGACTAAAGTCGATGAGAAAGTCGATTACTCGAACCTCCCTTCTCCTGTTCCCTATGAGGAACTCCACCGTGAAGCTCTCATGTCTTTAAAGTCGGACAATTTTGAGGGTTTACGCTTCGACTTTACCAGGGCGTTGAATCAGAAGTTTTCTCTCAGTCATAGTGTAATGATGGGGCCAACCGAAGTTCCTGCTCAGTCACCTGAAACTACTATCAAAATTCCAACAGCCCATTATGAGTTTGGTGCCAATTATTATGACCCAAAGTTGCTGCTCATCGGAAGGGTAATGACTGATGGTAGACTAAATGCGAGACTGAAAGCAGATTTAACTGATAAGTTAGTTGTGAAGGCGAATGCTCTGATAACAAATGAGGAACATATGTCACAAGCAATGTTCAACTTTGATTACATGGGATCAGACTACAGAGCTCAGCTTCAACTTGGACAGAGTGCCCTAATTGGAGCAACTTATATCCAGAGTGTTACAAACCATTTATCCTTGGGTGGTGAAATTTTCTGGGCTGGTGTGCCTCGGAAGTCGGGAATAGGCTATGCTGCTAGATACGAGACAGATAAAATGGTTGCTTCTGGTCAAGTTGCTAGCACGGGTGCTGTTGTTATGAACTATGTTCAGAAGATTTCAGATAAGGTGTCACTTGCCACTGATTTCATGTACAACTACTTTTCAAGAGATGTAACAGCTAGTGTGGGTTATGACTATATGCTTAGACAGGCTCGTGTGCGGGGTAAGATCGATTCAAACGGTGTTGCATCCGCTCTCCTTGAAGAAAGATTGAGTATGGGACTCAATTTTCTTCTTTCTGCAGAGCTGGATCATAAGAAGAAGGACTACAAGTTTGGTTTCGGATTAACAGTTGGTTAA
Protein Sequence
- >AT3G20000.1
MADLLPPLTAAQVDAKTKVDEKVDYSNLPSPVPYEELHREALMSLKSDNFEGLRFDFTRALNQKFSLSHSVMMGPTEVPAQSPETTIKIPTAHYEFGANYYDPKLLLIGRVMTDGRLNARLKADLTDKLVVKANALITNEEHMSQAMFNFDYMGSDYRAQLQLGQSALIGATYIQSVTNHLSLGGEIFWAGVPRKSGIGYAARYETDKMVASGQVASTGAVVMNYVQKISDKVSLATDFMYNYFSRDVTASVGYDYMLRQARVRGKIDSNGVASALLEERLSMGLNFLLSAELDHKKKDYKFGFGLTVG - >AT3G20000.2
MADLLPPLTAAQVDAKTKVDEKVDYSNLPSPVPYEELHREALMSLKSDNFEGLRFDFTRALNQKFSLSHSVMMGPTEVPAQSPETTIKIPTAHYEFGANYYDPKLLLIGRVMTDGRLNARLKADLTDKLVVKANALITNEEHMSQAMFNFDYMGSDYRAQLQLGQSALIGATYIQSVTNHLSLGGEIFWAGVPRKSGIGYAARYETDKMVASGQVASTGAVVMNYVQKISDKVSLATDFMYNYFSRDVTASVGYDYMLRQARVRGKIDSNGVASALLEERLSMGLNFLLSAELDHKKKDYKFGFGLTVG