Gene Details:
- Gene ID: AT3G19920
- Gene Symbol: LDPS
- Gene Name:
- Description: BTB/POZ domain protein;(source:Araport11)
- TAIR Accession: locus:2092281
- Genome: Araport11_genome_release
- Species: Arabidopsis thaliana
Transcripts:
Gene Ontology:
- GO:0044248 — acts upstream of or within — cellular catabolic process
- GO:1901575 — acts upstream of or within — organic substance catabolic process
- GO:0005634 — located in — nucleus
- GO:0043436 — acts upstream of or within — oxoacid metabolic process
- GO:0005811 — located in — lipid droplet
- GO:0003674 — enables — molecular_function
Literature:
- Functional compensation of primary and secondary metabolites by duplicate genes in Arabidopsis thaliana. DOI: 10.1093/molbev/msq204 ; PMID: 20736450
- Identification of Low-Abundance Lipid Droplet Proteins in Seeds and Seedlings. DOI: 10.1104/pp.19.01255 ; PMID: 31826923
Sequences:
cDNA Sequence
- >AT3G19920.2
GACCGATCGAACATTAATTAATTTCGTTAAGAGAGACAACAAAAAGAGAGAACAATGTCGTCGTCGAGGGAGCTACAATACTTGGAGTACACATACAGAAACAACCGTCCCACGACGGGTCTCCTCAACTCCATCTTCATGACCACCGTCAACACGGCCGCTCGTTCTCTCGTCTCCGTCGCTTCCACCGCCTCTACACCAGAGATTCCTTCTAGGCGATGGTCGGCTTCGGACCACCTCAGGTTCATGTCTATGATGATGACGTGGCTTACCCTTTGGATCCTTAGAGTTTTCTTGGACTATCTTCCTCTTCCTCTCATCTCTTCTTCTTCTTCTGCTTATTCTTATTCTTATCCTCCCTTTAGTTTCGCTTCGGGTCTTCTTACCACGGCTGCGGAGAACGCGTTGGTCCCGGCTAAGGCTTCCTCGTCGTCGTCCACGTCATCAACTGCGTTGGTGAAGTATTCAGGGTCGTCAGATTTGGGTATGATGATTTGCGACGGCGTTGATGAGCCTTCTGTTAACTCTCTCGGTAGAGCTCTTTGTCACGCATTAGCGCTTATGAACGAGATTCCAGTAACCTCAAGAAAATATCAATTTGCCATGGGAATGGCTGAGAAGATCATGGAAGACAACGCTCAGAGCGGCCACGTGGATTTACTAGACGTCAACAGAGCGGCCCTAGCTTCCTCCTTTGCGCGCACTACTGCGCGATTGCAGGACTGCTTGAAACGCTCTCGAACCGCTGACGAGCCCTTCGGTGGTTTGCCTTTGCGTGTGGTCAGCGCCCTCCCTCTGGGCGGCTACGTTGCCTCCTACGTGAGAGGGTTAAGTGCATGTATCAACACCGTCAGGTCCTTAGCAGACATGACTGGGAACTTGTTATCGCAGACTAGGAGGAGAGAGTCTGCGGTGGTGAGAGCGGGTGGTATCCAAGAAAATGAGGCTGAACTAGCGGTCGAGAAGCTTGCGGAGGAGCTGCTGTGGATGACAGAGAAGCTTAGGCGTTATGGTGCGGTGGCAGAAGGGATTAAGCGGTGGAGCTACGCTTCCGGTTTAGCTTCCTTGTCTCTCACGGCTGCTCCCAGGGTTCAAGGCCTCATGGTTAAGATTTCGGCGCTCTTAATTGGAGAGTTAGCAAGAGACAGCACACAAGTTCCAGGACAAGTGACATTCAGGCTCCTTGCAAACTGGCTCCCACTGTTTAGTCACGCAAGGAACGGGCTTGCGTTTCCCGTACTGACGGGTTATGAGAGAGTTGAGGTGGAACGAGCCATAGACAAAGCCATCTCGACTTTACCTGCATTGGACCAAGAAATCTTACTCACTAACTGGCTCCAAGATTTCTCAGTCTCGGCCTCCGAGTGGCCCAATCTTCAGCCAGCATATGACCGTTGGTGCCACTCCACTCGCCAACTTTTCATGTAGACGACCAATACCATAGTCATGTTCCAAAGAGAAAACATGAAAATTTGTTGTACTTTTCTTTGCTACGAGTTTTGATATTACCTTCTGTGTCCACATATTTATCTTAGGTAATAAAACAAGTTTCGATCTATTCTAAAGTTTCAGACCTACAAGGCTACCATGCAACCCCCCACCCTTGTGATGTTTCTCTG - >AT3G19920.1
GACCGATCGAACATTAATTAATTTCGTTAAGAGAGACAACAAAAAGAGAGAACAATGTCGTCGTCGAGGGAGCTACAATACTTGGAGTACACATACAGAAACAACCGTCCCACGACGGGTCTCCTCAACTCCATCTTCATGACCACCGTCAACACGGCCGCTCGTTCTCTCGTCTCCGTCGCTTCCACCGCCTCTACACCAGAGATTCCTTCTAGGCGATGGTCGGCTTCGGACCACCTCAGGTTCATGTCTATGATGATGACGTGGCTTACCCTTTGGATCCTTAGAGTTTTCTTGGACTATCTTCCTCTTCCTCTCATCTCTTCTTCTTCTTCTGCTTATTCTTATTCTTATCCTCCCTTTAGTTTCGCTTCGGGTCTTCTTACCACGGCTGCGGAGAACGCGTTGGTCCCGGCTAAGGCTTCCTCGTCGTCGTCCACGTCATCAACTGCGTTGGTGAAGTATTCAGGGTCGTCAGATTTGGGTATGATGATTTGCGACGGCGTTGATGAGCCTTCTGTTAACTCTCTCGGTAGAGCTCTTTGTCACGCATTAGCGCTTATGAACGAGATTCCAGTAACCTCAAGAAAATATCAATTTGCCATGGGAATGGCTGAGAAGATCATGGAAGACAACGCTCAGAGCGGCCACGTGGATTTACTAGACGTCAACAGAGCGGCCCTAGCTTCCTCCTTTGCGCGCACTACTGCGCGATTGCAGGACTGCTTGAAACGCTCTCGAACCGCTGACGAGCCCTTCGGTGGTTTGCCTTTGCGTGTGGTCAGCGCCCTCCCTCTGGGCGGCTACGTTGCCTCCTACGTGAGAGGGTTAAGTGCATGTATCAACACCGTCAGGTCCTTAGCAGACATGACTGGGAACTTGTTATCGCAGACTAGGAGGAGAGAGTCTGCGGTGGTGAGAGCGGGTGGTATCCAAGAAAATGAGGCTGAACTAGCGGTCGAGAAGCTTGCGGAGGAGCTGCTGTGGATGACAGAGAAGCTTAGGCGTTATGGTGCGGTGGCAGAAGGGATTAAGCGGTGGAGCTACGCTTCCGGTTTAGCTTCCTTGTCTCTCACGGCTGCTCCCAGGGTTCAAGGCCTCATGGTTAAGATTTCGGCGCTCTTAATTGGAGAGTTAGCAAGAGACAGCACACAAGTTCCAGGACAAGTGACATTCAGGCTCCTTGCAAACTGGCTCCCACTGTTTAGTCACGCAAGGAACGGGCTTGCGTTTCCCGTACTGACGGGTTATGAGAGAGTTGAGGTGGAACGAGCCATAGACAAAGCCATCTCGACTTTACCTGCATTGGACCAAGAAATCTTACTCACTAACTGGCTCCAAGATTTCTCAGTCTCGGCCTCCGAGTGGCCCAATCTTCAGCCAGCATATGACCGTTGGTGCCACTCCACTCGCCAACTTTTCATGTAGACGACCAATACCATAGTCATGTTCCAAAGAGAAAACATGAAAATTTGTTGTACTTTTCTTTGCTACGAGTTTTGATATTACCTTCTGTGTCCACATATTTATCTTAGGTAATAAAACAAGTTTCGATCTATTCTAAAGTTTCAGACCTACAAGGCTACCATGCAACCCCCCACCCTTGTGATGTTTCTCTG
CDS Sequence
- >AT3G19920.2
ATGTCGTCGTCGAGGGAGCTACAATACTTGGAGTACACATACAGAAACAACCGTCCCACGACGGGTCTCCTCAACTCCATCTTCATGACCACCGTCAACACGGCCGCTCGTTCTCTCGTCTCCGTCGCTTCCACCGCCTCTACACCAGAGATTCCTTCTAGGCGATGGTCGGCTTCGGACCACCTCAGGTTCATGTCTATGATGATGACGTGGCTTACCCTTTGGATCCTTAGAGTTTTCTTGGACTATCTTCCTCTTCCTCTCATCTCTTCTTCTTCTTCTGCTTATTCTTATTCTTATCCTCCCTTTAGTTTCGCTTCGGGTCTTCTTACCACGGCTGCGGAGAACGCGTTGGTCCCGGCTAAGGCTTCCTCGTCGTCGTCCACGTCATCAACTGCGTTGGTGAAGTATTCAGGGTCGTCAGATTTGGGTATGATGATTTGCGACGGCGTTGATGAGCCTTCTGTTAACTCTCTCGGTAGAGCTCTTTGTCACGCATTAGCGCTTATGAACGAGATTCCAGTAACCTCAAGAAAATATCAATTTGCCATGGGAATGGCTGAGAAGATCATGGAAGACAACGCTCAGAGCGGCCACGTGGATTTACTAGACGTCAACAGAGCGGCCCTAGCTTCCTCCTTTGCGCGCACTACTGCGCGATTGCAGGACTGCTTGAAACGCTCTCGAACCGCTGACGAGCCCTTCGGTGGTTTGCCTTTGCGTGTGGTCAGCGCCCTCCCTCTGGGCGGCTACGTTGCCTCCTACGTGAGAGGGTTAAGTGCATGTATCAACACCGTCAGGTCCTTAGCAGACATGACTGGGAACTTGTTATCGCAGACTAGGAGGAGAGAGTCTGCGGTGGTGAGAGCGGGTGGTATCCAAGAAAATGAGGCTGAACTAGCGGTCGAGAAGCTTGCGGAGGAGCTGCTGTGGATGACAGAGAAGCTTAGGCGTTATGGTGCGGTGGCAGAAGGGATTAAGCGGTGGAGCTACGCTTCCGGTTTAGCTTCCTTGTCTCTCACGGCTGCTCCCAGGGTTCAAGGCCTCATGGTTAAGATTTCGGCGCTCTTAATTGGAGAGTTAGCAAGAGACAGCACACAAGTTCCAGGACAAGTGACATTCAGGCTCCTTGCAAACTGGCTCCCACTGTTTAGTCACGCAAGGAACGGGCTTGCGTTTCCCGTACTGACGGGTTATGAGAGAGTTGAGGTGGAACGAGCCATAGACAAAGCCATCTCGACTTTACCTGCATTGGACCAAGAAATCTTACTCACTAACTGGCTCCAAGATTTCTCAGTCTCGGCCTCCGAGTGGCCCAATCTTCAGCCAGCATATGACCGTTGGTGCCACTCCACTCGCCAACTTTTCATGTAG - >AT3G19920.1
ATGTCGTCGTCGAGGGAGCTACAATACTTGGAGTACACATACAGAAACAACCGTCCCACGACGGGTCTCCTCAACTCCATCTTCATGACCACCGTCAACACGGCCGCTCGTTCTCTCGTCTCCGTCGCTTCCACCGCCTCTACACCAGAGATTCCTTCTAGGCGATGGTCGGCTTCGGACCACCTCAGGTTCATGTCTATGATGATGACGTGGCTTACCCTTTGGATCCTTAGAGTTTTCTTGGACTATCTTCCTCTTCCTCTCATCTCTTCTTCTTCTTCTGCTTATTCTTATTCTTATCCTCCCTTTAGTTTCGCTTCGGGTCTTCTTACCACGGCTGCGGAGAACGCGTTGGTCCCGGCTAAGGCTTCCTCGTCGTCGTCCACGTCATCAACTGCGTTGGTGAAGTATTCAGGGTCGTCAGATTTGGGTATGATGATTTGCGACGGCGTTGATGAGCCTTCTGTTAACTCTCTCGGTAGAGCTCTTTGTCACGCATTAGCGCTTATGAACGAGATTCCAGTAACCTCAAGAAAATATCAATTTGCCATGGGAATGGCTGAGAAGATCATGGAAGACAACGCTCAGAGCGGCCACGTGGATTTACTAGACGTCAACAGAGCGGCCCTAGCTTCCTCCTTTGCGCGCACTACTGCGCGATTGCAGGACTGCTTGAAACGCTCTCGAACCGCTGACGAGCCCTTCGGTGGTTTGCCTTTGCGTGTGGTCAGCGCCCTCCCTCTGGGCGGCTACGTTGCCTCCTACGTGAGAGGGTTAAGTGCATGTATCAACACCGTCAGGTCCTTAGCAGACATGACTGGGAACTTGTTATCGCAGACTAGGAGGAGAGAGTCTGCGGTGGTGAGAGCGGGTGGTATCCAAGAAAATGAGGCTGAACTAGCGGTCGAGAAGCTTGCGGAGGAGCTGCTGTGGATGACAGAGAAGCTTAGGCGTTATGGTGCGGTGGCAGAAGGGATTAAGCGGTGGAGCTACGCTTCCGGTTTAGCTTCCTTGTCTCTCACGGCTGCTCCCAGGGTTCAAGGCCTCATGGTTAAGATTTCGGCGCTCTTAATTGGAGAGTTAGCAAGAGACAGCACACAAGTTCCAGGACAAGTGACATTCAGGCTCCTTGCAAACTGGCTCCCACTGTTTAGTCACGCAAGGAACGGGCTTGCGTTTCCCGTACTGACGGGTTATGAGAGAGTTGAGGTGGAACGAGCCATAGACAAAGCCATCTCGACTTTACCTGCATTGGACCAAGAAATCTTACTCACTAACTGGCTCCAAGATTTCTCAGTCTCGGCCTCCGAGTGGCCCAATCTTCAGCCAGCATATGACCGTTGGTGCCACTCCACTCGCCAACTTTTCATGTAG
Protein Sequence
- >AT3G19920.2
MSSSRELQYLEYTYRNNRPTTGLLNSIFMTTVNTAARSLVSVASTASTPEIPSRRWSASDHLRFMSMMMTWLTLWILRVFLDYLPLPLISSSSSAYSYSYPPFSFASGLLTTAAENALVPAKASSSSSTSSTALVKYSGSSDLGMMICDGVDEPSVNSLGRALCHALALMNEIPVTSRKYQFAMGMAEKIMEDNAQSGHVDLLDVNRAALASSFARTTARLQDCLKRSRTADEPFGGLPLRVVSALPLGGYVASYVRGLSACINTVRSLADMTGNLLSQTRRRESAVVRAGGIQENEAELAVEKLAEELLWMTEKLRRYGAVAEGIKRWSYASGLASLSLTAAPRVQGLMVKISALLIGELARDSTQVPGQVTFRLLANWLPLFSHARNGLAFPVLTGYERVEVERAIDKAISTLPALDQEILLTNWLQDFSVSASEWPNLQPAYDRWCHSTRQLFM - >AT3G19920.1
MSSSRELQYLEYTYRNNRPTTGLLNSIFMTTVNTAARSLVSVASTASTPEIPSRRWSASDHLRFMSMMMTWLTLWILRVFLDYLPLPLISSSSSAYSYSYPPFSFASGLLTTAAENALVPAKASSSSSTSSTALVKYSGSSDLGMMICDGVDEPSVNSLGRALCHALALMNEIPVTSRKYQFAMGMAEKIMEDNAQSGHVDLLDVNRAALASSFARTTARLQDCLKRSRTADEPFGGLPLRVVSALPLGGYVASYVRGLSACINTVRSLADMTGNLLSQTRRRESAVVRAGGIQENEAELAVEKLAEELLWMTEKLRRYGAVAEGIKRWSYASGLASLSLTAAPRVQGLMVKISALLIGELARDSTQVPGQVTFRLLANWLPLFSHARNGLAFPVLTGYERVEVERAIDKAISTLPALDQEILLTNWLQDFSVSASEWPNLQPAYDRWCHSTRQLFM