Gene Details:
- Gene ID: AT3G19910
- Gene Symbol: CTL18
- Gene Name:
- Description: RING/U-box superfamily protein;(source:Araport11)
- TAIR Accession: locus:2092271
- Genome: Araport11_genome_release
- Species: Arabidopsis thaliana
Transcripts:
Plant Ontology Annotations:
- PO:0000084 — plant sperm cell — célula espermática o esperma (Spanish, exact), male gamete (exact), microgamete (exact), 植物精子細胞 (Japanese, exact), sperm nucleus (related), sperm cell (broad)
- PO:0025195 — pollen tube cell — célula del tubo polínico (Spanish, exact), 花粉管細胞 (Japanese, exact)
- PO:0025281 — pollen — polen (Spanish, exact), pollen grain (exact), 花粉 (Japanese, exact)
Gene Ontology:
- GO:0004842 — enables — ubiquitin-protein transferase activity
- GO:0005634 — located in — nucleus
- GO:0009415 — acts upstream of or within — response to water
Function-related keywords:
Literature:
- Evaluation and classification of RING-finger domains encoded by the Arabidopsis genome. DOI: 10.1186/gb-2002-3-4-research0016 ; PMID: 11983057
- Biosynthesis of cellulose-enriched tension wood in Populus: global analysis of transcripts and metabolites identifies biochemical and developmental regulators in secondary wall biosynthesis. DOI: 10.1111/j.1365-313X.2005.02584.x ; PMID: 16367961
- Type III effectors orchestrate a complex interplay between transcriptional networks to modify basal defence responses during pathogenesis and resistance. DOI: 10.1111/j.1365-313X.2006.02672.x ; PMID: 16553893
- Transcriptome analyses show changes in gene expression to accompany pollen germination and tube growth in Arabidopsis. DOI: 10.1104/pp.108.126375 ; PMID: 18775970
- Repertoire of plant RING E3 ubiquitin ligases revisited: New groups counting gene families and single genes. DOI: 10.1371/journal.pone.0203442 ; PMID: 30169501
Sequences:
cDNA Sequence
- >AT3G19910.1
TGACTTTTGGATTAACACATACTACCTATTGACATTATAAACGGAAAGGTGGAGGTGTAAATGATAATAAATATATATTAGTCGGTGAGTTTAGAAAGAAACAAAAATTAAAGGGGTGTGATTTCGAAGAAAATGTTGCATAGTTTTCAAAATTTGAAAATCTCAGCTAAAGAGAGAAAGAGAAGCACCATTTTTCTTTCTCGTCGTGTCATCGTTTTCTCAGATTCCTGAATAATCATTCCCTTCCGATTCCAAAATCCCCAAACCTCATCCACTCCTCCATCTCCCGGATTCGGATTCCCAGAATCATGCCCATGGAGAACGACAATGGCCCACACGTTGGCAACGTCGTCGTCACCGCTGAGCAAGCGACCAAGATTAACGAGACTGATGGACGGTTGCCGGAGAATCGGCAGACCGGTGTTGTCTCTGACACCGGAAGTGGTAGCGAGAGAGGAGAGCAAGGGGTTGGAGAGTCGGCAGTTGCTGTGGCGGTGCCGGTGGAGGAGAGCGGATCGATTTCGGTGGGAGAGCTACCTGCTCCCCGATCTTCCTCTGCTAGAGTTCCGTTTACTAATCTAAGCCAAATTGATGCGGATCTTGCTCTTGCTCGCACACTCCAAGAACAGGAGCGGGCGTATATGATGTTGACCATGAATAGTGAAATCAGTGACTATGGGAGCTGGGAAACTGGAAGCTATGTATACGATGAGGATGAGTTTGATGACCCCGAGAATGAGGATGAGGATGATGATGAAGATGAATATGAAACAGATGATGATCCTCAGGAAGATGGGCTTGATGTCAATGTGCACGCCAATGAAGATGATCAAGAAGATGACGGTAACTCTGACATTGAAGAAGTTGCTTATACAGATGATGAGGCCTATGCTAGAGCTCTTCAAGAAGCTGAAGAAAGGGATATGGCTGCTAGATTGTCTGCCTTATCTGGGTTAGCAAACCGGGTGGTTGAAGATCTAGAGGATGAGAGTCATACTTCTCAGGATGCCTGGGATGAGATGGATCCTGATGAGCTTTCATATGAGGAGTTGCTTGCACTTGGCGACATTGTGGGAACCGAAAGTAGAGGATTGTCTGCTGATACAATTGCATCTTTGCCTTCAAAAAGATATAAAGAAGGAGACAATCAGAACGGAACCAATGAGTCATGTGTTATATGTCGTTTAGACTATGAGGATGACGAAGACCTGATACTGCTCCCATGCAAACATTCTTACCACTCGGAGTGCATAAACAACTGGTTGAAGATAAACAAGGTTTGCCCCGTATGCAGTGCAGAAGTTTCAACTTCGACCTCTGGACAAAGCTGATGAGGCAAAGGAAGAAAGATTCAGAAAGAATCATAAGCTAAGAACTTCAAAACCTTAGCTGCCTGTTTGTACACTTCTTATAAACAAAATAACATCATCAGATTTCCTTGGATCCTTTAAAAAATCTCAAAGATTGGAACATTCTCAAGCGTTTTTAGTTTTTGCATTCATCTGCTTCCGTATTTGCCGTTGTGGGATATAGTTTATCACATAGTAAGTATCTATTTCATTGATGTTCACGTA - >AT3G19910.2
TGACTTTTGGATTAACACATACTACCTATTGACATTATAAACGGAAAGGTGGAGGTGTAAATGATAATAAATATATATTAGTCGGTGAGTTTAGAAAGAAACAAAAATTAAAGGGGTGTGATTTCGAAGAAAATGTTGCATAGTTTTCAAAATTTGAAAATCTCAGCTAAAGAGAGAAAGAGAAGCACCATTTTTCTTTCTCGTCGTGTCATCGTTTTCTCAGATTCCTGAATAATCATTCCCTTCCGATTCCAAAATCCCCAAACCTCATCCACTCCTCCATCTCCCGGATTCGGATTCCCAGAATCATGCCCATGGAGAACGACAATGGCCCACACGTTGGCAACGTCGTCGTCACCGCTGAGCAAGCGACCAAGATTAACGAGACTGATGGACGGTTGCCGGAGAATCGGCAGACCGGTGTTGTCTCTGACACCGGAAGTGGTAGCGAGAGAGGAGAGCAAGGGGTTGGAGAGTCGGCAGTTGCTGTGGCGGTGCCGGTGGAGGAGAGCGGATCGATTTCGGTGGGAGAGCTACCTGCTCCCCGATCTTCCTCTGCTAGAGTTCCGTTTACTAATCTAAGCCAAATTGATGCGGATCTTGCTCTTGCTCGCACACTCCAAGAACAGGAGCGGGCGTATATGATGTTGACCATGAATAGTGAAATCAGTGACTATGGGAGCTGGGAAACTGGAAGCTATGTATACGATGAGGATGAGTTTGATGACCCCGAGAATGAGGATGAGGATGATGATGAAGATGAATATGAAACAGATGATGATCCTCAGGAAGATGGGCTTGATGTCAATGTGCACGCCAATGAAGATGATCAAGAAGATGACGGTAACTCTGACATTGAAGAAGTTGCTTATACAGATGATGAGGCCTATGCTAGAGCTCTTCAAGAAGCTGAAGAAAGGGATATGGCTGCTAGATTGTCTGCCTTATCTGGGTTAGCAAACCGGGTGGTTGAAGATCTAGAGGATGAGAGTCATACTTCTCAGGATGCCTGGGATGAGATGGATCCTGATGAGCTTTCATATGAGGAGTTGCTTGCACTTGGCGACATTGTGGGAACCGAAAGTAGAGGATTGTCTGCTGATACAATTGCATCTTTGCCTTCAAAAAGATATAAAGAAGGAGACAATCAGAACGGAACCAATGAGTCATGTGTTATATGTCGTTTAGACTATGAGGATGACGAAGACCTGATACTGCTCCCATGCAAACATTCTTACCACTCGGAGTGCATAAACAACTGGTTGAAGATAAACAAGGTTTGCCCCGTATGCAGTGCAGAAGTTTCAACTTCGACCTCTGGACAAAGCTGATGAGGCAAAGGAAGAAAGATTCAGAAAGAATCATAAGCTAAGAACTTCAAAACCTTAGCTGCCTGTTTGTACACTTCTTATAAACAAAATAACATCATCAGATTTCCTTGGATCCTTTAAAAAATCTCAAAGATTGGAACATTCTCAAGCGTTTTTAGTTTTTGCATTCATCTGCTTCCGTATTTGCCGTTGTGGGATATAGTTTATCACATAGTAAGTATCTATTTCATTGATGTTCACGTA
CDS Sequence
- >AT3G19910.1
ATGCCCATGGAGAACGACAATGGCCCACACGTTGGCAACGTCGTCGTCACCGCTGAGCAAGCGACCAAGATTAACGAGACTGATGGACGGTTGCCGGAGAATCGGCAGACCGGTGTTGTCTCTGACACCGGAAGTGGTAGCGAGAGAGGAGAGCAAGGGGTTGGAGAGTCGGCAGTTGCTGTGGCGGTGCCGGTGGAGGAGAGCGGATCGATTTCGGTGGGAGAGCTACCTGCTCCCCGATCTTCCTCTGCTAGAGTTCCGTTTACTAATCTAAGCCAAATTGATGCGGATCTTGCTCTTGCTCGCACACTCCAAGAACAGGAGCGGGCGTATATGATGTTGACCATGAATAGTGAAATCAGTGACTATGGGAGCTGGGAAACTGGAAGCTATGTATACGATGAGGATGAGTTTGATGACCCCGAGAATGAGGATGAGGATGATGATGAAGATGAATATGAAACAGATGATGATCCTCAGGAAGATGGGCTTGATGTCAATGTGCACGCCAATGAAGATGATCAAGAAGATGACGGTAACTCTGACATTGAAGAAGTTGCTTATACAGATGATGAGGCCTATGCTAGAGCTCTTCAAGAAGCTGAAGAAAGGGATATGGCTGCTAGATTGTCTGCCTTATCTGGGTTAGCAAACCGGGTGGTTGAAGATCTAGAGGATGAGAGTCATACTTCTCAGGATGCCTGGGATGAGATGGATCCTGATGAGCTTTCATATGAGGAGTTGCTTGCACTTGGCGACATTGTGGGAACCGAAAGTAGAGGATTGTCTGCTGATACAATTGCATCTTTGCCTTCAAAAAGATATAAAGAAGGAGACAATCAGAACGGAACCAATGAGTCATGTGTTATATGTCGTTTAGACTATGAGGATGACGAAGACCTGATACTGCTCCCATGCAAACATTCTTACCACTCGGAGTGCATAAACAACTGGTTGAAGATAAACAAGGTTTGCCCCGTATGCAGTGCAGAAGTTTCAACTTCGACCTCTGGACAAAGCTGA - >AT3G19910.2
ATGCCCATGGAGAACGACAATGGCCCACACGTTGGCAACGTCGTCGTCACCGCTGAGCAAGCGACCAAGATTAACGAGACTGATGGACGGTTGCCGGAGAATCGGCAGACCGGTGTTGTCTCTGACACCGGAAGTGGTAGCGAGAGAGGAGAGCAAGGGGTTGGAGAGTCGGCAGTTGCTGTGGCGGTGCCGGTGGAGGAGAGCGGATCGATTTCGGTGGGAGAGCTACCTGCTCCCCGATCTTCCTCTGCTAGAGTTCCGTTTACTAATCTAAGCCAAATTGATGCGGATCTTGCTCTTGCTCGCACACTCCAAGAACAGGAGCGGGCGTATATGATGTTGACCATGAATAGTGAAATCAGTGACTATGGGAGCTGGGAAACTGGAAGCTATGTATACGATGAGGATGAGTTTGATGACCCCGAGAATGAGGATGAGGATGATGATGAAGATGAATATGAAACAGATGATGATCCTCAGGAAGATGGGCTTGATGTCAATGTGCACGCCAATGAAGATGATCAAGAAGATGACGGTAACTCTGACATTGAAGAAGTTGCTTATACAGATGATGAGGCCTATGCTAGAGCTCTTCAAGAAGCTGAAGAAAGGGATATGGCTGCTAGATTGTCTGCCTTATCTGGGTTAGCAAACCGGGTGGTTGAAGATCTAGAGGATGAGAGTCATACTTCTCAGGATGCCTGGGATGAGATGGATCCTGATGAGCTTTCATATGAGGAGTTGCTTGCACTTGGCGACATTGTGGGAACCGAAAGTAGAGGATTGTCTGCTGATACAATTGCATCTTTGCCTTCAAAAAGATATAAAGAAGGAGACAATCAGAACGGAACCAATGAGTCATGTGTTATATGTCGTTTAGACTATGAGGATGACGAAGACCTGATACTGCTCCCATGCAAACATTCTTACCACTCGGAGTGCATAAACAACTGGTTGAAGATAAACAAGGTTTGCCCCGTATGCAGTGCAGAAGTTTCAACTTCGACCTCTGGACAAAGCTGA
Protein Sequence
- >AT3G19910.1
MPMENDNGPHVGNVVVTAEQATKINETDGRLPENRQTGVVSDTGSGSERGEQGVGESAVAVAVPVEESGSISVGELPAPRSSSARVPFTNLSQIDADLALARTLQEQERAYMMLTMNSEISDYGSWETGSYVYDEDEFDDPENEDEDDDEDEYETDDDPQEDGLDVNVHANEDDQEDDGNSDIEEVAYTDDEAYARALQEAEERDMAARLSALSGLANRVVEDLEDESHTSQDAWDEMDPDELSYEELLALGDIVGTESRGLSADTIASLPSKRYKEGDNQNGTNESCVICRLDYEDDEDLILLPCKHSYHSECINNWLKINKVCPVCSAEVSTSTSGQS - >AT3G19910.2
MPMENDNGPHVGNVVVTAEQATKINETDGRLPENRQTGVVSDTGSGSERGEQGVGESAVAVAVPVEESGSISVGELPAPRSSSARVPFTNLSQIDADLALARTLQEQERAYMMLTMNSEISDYGSWETGSYVYDEDEFDDPENEDEDDDEDEYETDDDPQEDGLDVNVHANEDDQEDDGNSDIEEVAYTDDEAYARALQEAEERDMAARLSALSGLANRVVEDLEDESHTSQDAWDEMDPDELSYEELLALGDIVGTESRGLSADTIASLPSKRYKEGDNQNGTNESCVICRLDYEDDEDLILLPCKHSYHSECINNWLKINKVCPVCSAEVSTSTSGQS