Information report for AT3G19910
Gene Details
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Functional Descriptions
- PO:0000084 — plant sperm cell — célula espermática o esperma (Spanish, exact), male gamete (exact), microgamete (exact), 植物精子細胞 (Japanese, exact), sperm nucleus (related), sperm cell (broad)
- PO:0025195 — pollen tube cell — célula del tubo polínico (Spanish, exact), 花粉管細胞 (Japanese, exact)
- PO:0025281 — pollen — polen (Spanish, exact), pollen grain (exact), 花粉 (Japanese, exact)
- GO:0004842 — enables — ubiquitin-protein transferase activity
- GO:0005634 — located in — nucleus
- GO:0009415 — acts upstream of or within — response to water
Functional Keywords
Literature and News
- Evaluation and classification of RING-finger domains encoded by the Arabidopsis genome. DOI: 10.1186/gb-2002-3-4-research0016 ; PMID: 11983057
- Biosynthesis of cellulose-enriched tension wood in Populus: global analysis of transcripts and metabolites identifies biochemical and developmental regulators in secondary wall biosynthesis. DOI: 10.1111/j.1365-313X.2005.02584.x ; PMID: 16367961
- Type III effectors orchestrate a complex interplay between transcriptional networks to modify basal defence responses during pathogenesis and resistance. DOI: 10.1111/j.1365-313X.2006.02672.x ; PMID: 16553893
- Transcriptome analyses show changes in gene expression to accompany pollen germination and tube growth in Arabidopsis. DOI: 10.1104/pp.108.126375 ; PMID: 18775970
- Repertoire of plant RING E3 ubiquitin ligases revisited: New groups counting gene families and single genes. DOI: 10.1371/journal.pone.0203442 ; PMID: 30169501
Gene Resources
- UniProt: A0A178VK20
- EMBL: LUHQ01000003
- AlphaFoldDB: A0A178VK20
- EnsemblPlants: AT3G19910.1
- Gramene: AT3G19910.1
- KEGG: ath:AT3G19910
- Orthologous matrix: NGEEHMA
- ExpressionAtlas: AT3G19910
- InterPro: IPR001841, IPR013083, IPR043312
- PANTHER: PTHR47530, PTHR47530:SF4
- SUPFAM: SSF57850
- PROSITE: PS50089
- Gene3D: 3.30.40.10
- SWISS-MODEL: A0A178VK20
- Conserved Domain Database: cd23115
Homologs
- Actinidia chinensis CEY00_Acc23758
- Brassica napus BnaC05G0452100ZS, BnaA03G0340000ZS
- Brassica oleracea Bo5g127480
- Brassica rapa Bra001582
- Glycine max Glyma.10G051200, Glyma.13G138700
- Musa acuminata GSMUA_Achr4P19750_001
- Oryza sativa OsSIRH2-14, OsRMT1, OsBBI1
- Solanum lycopersicum Solyc01g107940.3, Solyc01g107930.3
- Solanum tuberosum PGSC0003DMG400030833
- Vitis vinifera VIT_11s0118g00640, VIT_07s0031g00400, VIT_07s0031g00440
Sequences
cDNA Sequence
- >AT3G19910.1
TGACTTTTGGATTAACACATACTACCTATTGACATTATAAACGGAAAGGTGGAGGTGTAAATGATAATAAATATATATTAGTCGGTGAGTTTAGAAAGAAACAAAAATTAAAGGGGTGTGATTTCGAAGAAAATGTTGCATAGTTTTCAAAATTTGAAAATCTCAGCTAAAGAGAGAAAGAGAAGCACCATTTTTCTTTCTCGTCGTGTCATCGTTTTCTCAGATTCCTGAATAATCATTCCCTTCCGATTCCAAAATCCCCAAACCTCATCCACTCCTCCATCTCCCGGATTCGGATTCCCAGAATCATGCCCATGGAGAACGACAATGGCCCACACGTTGGCAACGTCGTCGTCACCGCTGAGCAAGCGACCAAGATTAACGAGACTGATGGACGGTTGCCGGAGAATCGGCAGACCGGTGTTGTCTCTGACACCGGAAGTGGTAGCGAGAGAGGAGAGCAAGGGGTTGGAGAGTCGGCAGTTGCTGTGGCGGTGCCGGTGGAGGAGAGCGGATCGATTTCGGTGGGAGAGCTACCTGCTCCCCGATCTTCCTCTGCTAGAGTTCCGTTTACTAATCTAAGCCAAATTGATGCGGATCTTGCTCTTGCTCGCACACTCCAAGAACAGGAGCGGGCGTATATGATGTTGACCATGAATAGTGAAATCAGTGACTATGGGAGCTGGGAAACTGGAAGCTATGTATACGATGAGGATGAGTTTGATGACCCCGAGAATGAGGATGAGGATGATGATGAAGATGAATATGAAACAGATGATGATCCTCAGGAAGATGGGCTTGATGTCAATGTGCACGCCAATGAAGATGATCAAGAAGATGACGGTAACTCTGACATTGAAGAAGTTGCTTATACAGATGATGAGGCCTATGCTAGAGCTCTTCAAGAAGCTGAAGAAAGGGATATGGCTGCTAGATTGTCTGCCTTATCTGGGTTAGCAAACCGGGTGGTTGAAGATCTAGAGGATGAGAGTCATACTTCTCAGGATGCCTGGGATGAGATGGATCCTGATGAGCTTTCATATGAGGAGTTGCTTGCACTTGGCGACATTGTGGGAACCGAAAGTAGAGGATTGTCTGCTGATACAATTGCATCTTTGCCTTCAAAAAGATATAAAGAAGGAGACAATCAGAACGGAACCAATGAGTCATGTGTTATATGTCGTTTAGACTATGAGGATGACGAAGACCTGATACTGCTCCCATGCAAACATTCTTACCACTCGGAGTGCATAAACAACTGGTTGAAGATAAACAAGGTTTGCCCCGTATGCAGTGCAGAAGTTTCAACTTCGACCTCTGGACAAAGCTGATGAGGCAAAGGAAGAAAGATTCAGAAAGAATCATAAGCTAAGAACTTCAAAACCTTAGCTGCCTGTTTGTACACTTCTTATAAACAAAATAACATCATCAGATTTCCTTGGATCCTTTAAAAAATCTCAAAGATTGGAACATTCTCAAGCGTTTTTAGTTTTTGCATTCATCTGCTTCCGTATTTGCCGTTGTGGGATATAGTTTATCACATAGTAAGTATCTATTTCATTGATGTTCACGTA - >AT3G19910.2
TGACTTTTGGATTAACACATACTACCTATTGACATTATAAACGGAAAGGTGGAGGTGTAAATGATAATAAATATATATTAGTCGGTGAGTTTAGAAAGAAACAAAAATTAAAGGGGTGTGATTTCGAAGAAAATGTTGCATAGTTTTCAAAATTTGAAAATCTCAGCTAAAGAGAGAAAGAGAAGCACCATTTTTCTTTCTCGTCGTGTCATCGTTTTCTCAGATTCCTGAATAATCATTCCCTTCCGATTCCAAAATCCCCAAACCTCATCCACTCCTCCATCTCCCGGATTCGGATTCCCAGAATCATGCCCATGGAGAACGACAATGGCCCACACGTTGGCAACGTCGTCGTCACCGCTGAGCAAGCGACCAAGATTAACGAGACTGATGGACGGTTGCCGGAGAATCGGCAGACCGGTGTTGTCTCTGACACCGGAAGTGGTAGCGAGAGAGGAGAGCAAGGGGTTGGAGAGTCGGCAGTTGCTGTGGCGGTGCCGGTGGAGGAGAGCGGATCGATTTCGGTGGGAGAGCTACCTGCTCCCCGATCTTCCTCTGCTAGAGTTCCGTTTACTAATCTAAGCCAAATTGATGCGGATCTTGCTCTTGCTCGCACACTCCAAGAACAGGAGCGGGCGTATATGATGTTGACCATGAATAGTGAAATCAGTGACTATGGGAGCTGGGAAACTGGAAGCTATGTATACGATGAGGATGAGTTTGATGACCCCGAGAATGAGGATGAGGATGATGATGAAGATGAATATGAAACAGATGATGATCCTCAGGAAGATGGGCTTGATGTCAATGTGCACGCCAATGAAGATGATCAAGAAGATGACGGTAACTCTGACATTGAAGAAGTTGCTTATACAGATGATGAGGCCTATGCTAGAGCTCTTCAAGAAGCTGAAGAAAGGGATATGGCTGCTAGATTGTCTGCCTTATCTGGGTTAGCAAACCGGGTGGTTGAAGATCTAGAGGATGAGAGTCATACTTCTCAGGATGCCTGGGATGAGATGGATCCTGATGAGCTTTCATATGAGGAGTTGCTTGCACTTGGCGACATTGTGGGAACCGAAAGTAGAGGATTGTCTGCTGATACAATTGCATCTTTGCCTTCAAAAAGATATAAAGAAGGAGACAATCAGAACGGAACCAATGAGTCATGTGTTATATGTCGTTTAGACTATGAGGATGACGAAGACCTGATACTGCTCCCATGCAAACATTCTTACCACTCGGAGTGCATAAACAACTGGTTGAAGATAAACAAGGTTTGCCCCGTATGCAGTGCAGAAGTTTCAACTTCGACCTCTGGACAAAGCTGATGAGGCAAAGGAAGAAAGATTCAGAAAGAATCATAAGCTAAGAACTTCAAAACCTTAGCTGCCTGTTTGTACACTTCTTATAAACAAAATAACATCATCAGATTTCCTTGGATCCTTTAAAAAATCTCAAAGATTGGAACATTCTCAAGCGTTTTTAGTTTTTGCATTCATCTGCTTCCGTATTTGCCGTTGTGGGATATAGTTTATCACATAGTAAGTATCTATTTCATTGATGTTCACGTA
CDS Sequence
- >AT3G19910.1
ATGCCCATGGAGAACGACAATGGCCCACACGTTGGCAACGTCGTCGTCACCGCTGAGCAAGCGACCAAGATTAACGAGACTGATGGACGGTTGCCGGAGAATCGGCAGACCGGTGTTGTCTCTGACACCGGAAGTGGTAGCGAGAGAGGAGAGCAAGGGGTTGGAGAGTCGGCAGTTGCTGTGGCGGTGCCGGTGGAGGAGAGCGGATCGATTTCGGTGGGAGAGCTACCTGCTCCCCGATCTTCCTCTGCTAGAGTTCCGTTTACTAATCTAAGCCAAATTGATGCGGATCTTGCTCTTGCTCGCACACTCCAAGAACAGGAGCGGGCGTATATGATGTTGACCATGAATAGTGAAATCAGTGACTATGGGAGCTGGGAAACTGGAAGCTATGTATACGATGAGGATGAGTTTGATGACCCCGAGAATGAGGATGAGGATGATGATGAAGATGAATATGAAACAGATGATGATCCTCAGGAAGATGGGCTTGATGTCAATGTGCACGCCAATGAAGATGATCAAGAAGATGACGGTAACTCTGACATTGAAGAAGTTGCTTATACAGATGATGAGGCCTATGCTAGAGCTCTTCAAGAAGCTGAAGAAAGGGATATGGCTGCTAGATTGTCTGCCTTATCTGGGTTAGCAAACCGGGTGGTTGAAGATCTAGAGGATGAGAGTCATACTTCTCAGGATGCCTGGGATGAGATGGATCCTGATGAGCTTTCATATGAGGAGTTGCTTGCACTTGGCGACATTGTGGGAACCGAAAGTAGAGGATTGTCTGCTGATACAATTGCATCTTTGCCTTCAAAAAGATATAAAGAAGGAGACAATCAGAACGGAACCAATGAGTCATGTGTTATATGTCGTTTAGACTATGAGGATGACGAAGACCTGATACTGCTCCCATGCAAACATTCTTACCACTCGGAGTGCATAAACAACTGGTTGAAGATAAACAAGGTTTGCCCCGTATGCAGTGCAGAAGTTTCAACTTCGACCTCTGGACAAAGCTGA - >AT3G19910.2
ATGCCCATGGAGAACGACAATGGCCCACACGTTGGCAACGTCGTCGTCACCGCTGAGCAAGCGACCAAGATTAACGAGACTGATGGACGGTTGCCGGAGAATCGGCAGACCGGTGTTGTCTCTGACACCGGAAGTGGTAGCGAGAGAGGAGAGCAAGGGGTTGGAGAGTCGGCAGTTGCTGTGGCGGTGCCGGTGGAGGAGAGCGGATCGATTTCGGTGGGAGAGCTACCTGCTCCCCGATCTTCCTCTGCTAGAGTTCCGTTTACTAATCTAAGCCAAATTGATGCGGATCTTGCTCTTGCTCGCACACTCCAAGAACAGGAGCGGGCGTATATGATGTTGACCATGAATAGTGAAATCAGTGACTATGGGAGCTGGGAAACTGGAAGCTATGTATACGATGAGGATGAGTTTGATGACCCCGAGAATGAGGATGAGGATGATGATGAAGATGAATATGAAACAGATGATGATCCTCAGGAAGATGGGCTTGATGTCAATGTGCACGCCAATGAAGATGATCAAGAAGATGACGGTAACTCTGACATTGAAGAAGTTGCTTATACAGATGATGAGGCCTATGCTAGAGCTCTTCAAGAAGCTGAAGAAAGGGATATGGCTGCTAGATTGTCTGCCTTATCTGGGTTAGCAAACCGGGTGGTTGAAGATCTAGAGGATGAGAGTCATACTTCTCAGGATGCCTGGGATGAGATGGATCCTGATGAGCTTTCATATGAGGAGTTGCTTGCACTTGGCGACATTGTGGGAACCGAAAGTAGAGGATTGTCTGCTGATACAATTGCATCTTTGCCTTCAAAAAGATATAAAGAAGGAGACAATCAGAACGGAACCAATGAGTCATGTGTTATATGTCGTTTAGACTATGAGGATGACGAAGACCTGATACTGCTCCCATGCAAACATTCTTACCACTCGGAGTGCATAAACAACTGGTTGAAGATAAACAAGGTTTGCCCCGTATGCAGTGCAGAAGTTTCAACTTCGACCTCTGGACAAAGCTGA
Protein Sequence
- >AT3G19910.1
MPMENDNGPHVGNVVVTAEQATKINETDGRLPENRQTGVVSDTGSGSERGEQGVGESAVAVAVPVEESGSISVGELPAPRSSSARVPFTNLSQIDADLALARTLQEQERAYMMLTMNSEISDYGSWETGSYVYDEDEFDDPENEDEDDDEDEYETDDDPQEDGLDVNVHANEDDQEDDGNSDIEEVAYTDDEAYARALQEAEERDMAARLSALSGLANRVVEDLEDESHTSQDAWDEMDPDELSYEELLALGDIVGTESRGLSADTIASLPSKRYKEGDNQNGTNESCVICRLDYEDDEDLILLPCKHSYHSECINNWLKINKVCPVCSAEVSTSTSGQS - >AT3G19910.2
MPMENDNGPHVGNVVVTAEQATKINETDGRLPENRQTGVVSDTGSGSERGEQGVGESAVAVAVPVEESGSISVGELPAPRSSSARVPFTNLSQIDADLALARTLQEQERAYMMLTMNSEISDYGSWETGSYVYDEDEFDDPENEDEDDDEDEYETDDDPQEDGLDVNVHANEDDQEDDGNSDIEEVAYTDDEAYARALQEAEERDMAARLSALSGLANRVVEDLEDESHTSQDAWDEMDPDELSYEELLALGDIVGTESRGLSADTIASLPSKRYKEGDNQNGTNESCVICRLDYEDDEDLILLPCKHSYHSECINNWLKINKVCPVCSAEVSTSTSGQS