Gene Details:
- Gene ID: AT3G19810
- Gene Symbol: DUF177, DUF177A
- Gene Name: domain of unknown function 177 A
- Description: BTB/POZ domain protein, putative (DUF177);(source:Araport11)
- TAIR Accession: locus:2092266
- Genome: Araport11_genome_release
- Species: Arabidopsis thaliana
Transcripts:
Gene Ontology:
- GO:0006364 — acts upstream of or within — rRNA processing
- GO:0009507 — located in — chloroplast
- GO:0003674 — enables — molecular_function
Germplasm Phenotype:
- atduf177a — Homozygotes are embryo lethal
Literature:
- Inactivation of the chloroplast ATP synthase gamma subunit results in high non-photochemical fluorescence quenching and altered nuclear gene expression in Arabidopsis thaliana. DOI: 10.1074/jbc.M308435200 ; PMID: 14576160
- Genome-wide identification of EMBRYO-DEFECTIVE (EMB) genes required for growth and development in Arabidopsis. DOI: 10.1111/nph.16071 ; PMID: 31334862
Sequences:
cDNA Sequence
- >AT3G19810.1
ATTTCAACTTCTCTCTTTATACCACCACCAACTAGGCTTTAGATCATTCACGACGTGAATCTAAAACACTAAAACCCGACTTTGTTAGTTTTATTGGGGTGCGGTTAGGTTTGATATAAACCTGGAAATACCGGTATTTGAACCGAAGTTGACCGGGTGAGACTTTTTAGGATAAACCCAAGCAGCCATTTCCGAGTAAGAAGAGCTCTGTTTCTGAAAGAAGTTTTACAGAGTCGATCGTCTAAAGCGTTGTTGAAGCACTTGTTAGTGGTGCTCTGTTTCAAGCTGGATAAACCCAATCCTATTGGGATTTGGCTGGATTTTATACCATATTTTAGCATGATTGTTTGATAAACGCTTGATAAATTGCCTCTTGTTGTCACCTTTGCTACGAAAATGTCTCTGGTTTGCTCTTTATCTTGTGTAGCTCCCTTGCCACAGACTAAACAGTCGCGTCCAAGTTTTCTGAAACTCGAAACATGTACCTTAAGTTTATCTTCTCCCGCTGGCTATCCTAATTTTACCACCGGTATTAGGAAGCATATCAGTTACTTGTTCACTGAACCGATCAAGCTTCCTAGGCTAGCAAAGAGTCGGATATTAGTTAGTCAGGAGTCTTTTACAGAGACCAGCACAATAGATATGGATTGGGAAGATCAGGAGGAAATTGAGGATACTGGGTCACCTTGGGAAGGTTCGGTTATGTATAGGAGAAATGCTTCAGTTACACATGTTGAATATTGCACTACCTTAGAGAGGCTTGGGTTGGGAAGGTTGTCAACAGATGTCTCGAAGAAGAGAGCTTCTGCAATGGGACTTAGAGTGACAAAAGATGTCAAGGATTATCCAGATGGCACACCAGTTCAAGTTTCGGTTGATGTCATAAGGAAGAAGAAGAAGCTGAGACTTGATGGAATTGTCAGGACTGTTATCACACTCGGCTGCAACAGATGTGGTGAGTCAACAGGTGAGAGCATCTTCTCCAACTTCTCGCTATTACTAACCGAAGAGCCAGTTGAAGAACCCGATGTCATTGATCTAGGATTCACATTCGGTAATGACAAAGAAGAAGGCGAAGATGATGATGATAATGATGATTCATGGATAGATTGGGAGGATAAGCTTCATTTTCCACCTGAGGTGAAAGAAATAGATATCTCAAAGCATATAAGAGACTTGGTGCATTTAGAAATCACCATCACTGCGATATGCGATTCTGCATGTAAAGGAATGTGCTTGAAGTGTGGTGCGAATCTGAATAAGAGGAAATGTGATTGTGGCAGAGAAGAGAAGGATAAAGGATATGGACCTCTCGGAAATCTTAGAGAGCAAATGCAACAAAAAGAGGGACTAAGGAACTAAACTCAACTCAACGATAATTGTATGTATTTTCCTTTTTACATCTTCATCTTGTTGGTGTTACTGTCATAAAACTCAAAATCAGGTACAATAATGTTCAAATGTGAATCTTAAGTAGCTATAACGTTTTCATTATCTCATTCATATGATTTTTATTTAGAATCAATCATTACATATTCTTGTA - >AT3G19810.2
ATTTCAACTTCTCTCTTTATACCACCACCAACTAGGCTTTAGATCATTCACGACGTGAATCTAAAACACTAAAACCCGACTTTGTTAGTTTTATTGGGGTGCGGTTAGGTTTGATATAAACCTGGAAATACCGGTATTTGAACCGAAGTTGACCGGGTGAGACTTTTTAGGATAAACCCAAGCAGCCATTTCCGAGTAAGAAGAGCTCTGTTTCTGAAAGAAGTTTTACAGAGTCGATCGTCTAAAGCGTTGTTGAAGCACTTGTTAGTGGTGCTCTGTTTCAAGCTGGATAAACCCAATCCTATTGGGATTTGGCTGGATTTTATACCATATTTTAGCATGATTGTTTGATAAACGCTTGATAAATTGCCTCTTGTTGTCACCTTTGCTACGAAAATGTCTCTGGTTTGCTCTTTATCTTGTGTAGCTCCCTTGCCACAGACTAAACAGTCGCGTCCAAGTTTTCTGAAACTCGAAACATGTACCTTAAGTTTATCTTCTCCCGCTGGCTATCCTAATTTTACCACCGGTATTAGGAAGCATATCAGTTACTTGTTCACTGAACCGATCAAGCTTCCTAGGCTAGCAAAGAGTCGGATATTAGTTAGTCAGGAGTCTTTTACAGAGACCAGCACAATAGATATGGATTGGGAAGATCAGGAGGAAATTGAGGATACTGGGTCACCTTGGGAAGGTTCGGTTATGTATAGGAGAAATGCTTCAGTTACACATGTTGAATATTGCACTACCTTAGAGAGGCTTGGGTTGGGAAGGTTGTCAACAGATGTCTCGAAGAAGAGAGCTTCTGCAATGGGACTTAGAGTGACAAAAGATGTCAAGGATTATCCAGATGGCACACCAGTTCAAGTTTCGGTTGATGTCATAAGGAAGAAGAAGAAGCTGAGACTTGATGGAATTGTCAGGACTGTTATCACACTCGGCTGCAACAGATGTGGTGAGTCAACAGGTGAGAGCATCTTCTCCAACTTCTCGCTATTACTAACCGAAGAGCCAGTTGAAGAACCCGATGTCATTGATCTAGGATTCACATTCGGTAATGACAAAGAAGAAGGCGAAGATGATGATGATAATGATGATTCATGGATAGATTGGGAGGATAAGCTTCATTTTCCACCTGAGGTGAAAGAAATAGATATCTCAAAGCATATAAGAGACTTGGTGCATTTAGAAATCACCATCACTGCGATATGCGATTCTGCATGTAAAGGAATGTGCTTGAAGTGTGGTGCGAATCTGAATAAGAGGAAATGTGATTGTGGCAGAGAAGAGAAGGATAAAGGATATGGACCTCTCGGAAATCTTAGAGAGCAAATGCAACAAAAAGAGGGACTAAGGAACTAAACTCAACTCAACGATAATTGTATGTATTTTCCTTTTTACATCTTCATCTTGTTGGTGTTACTGTCATAAAACTCAAAATCAGGTACAATAATGTTCAAATGTGAATCTTAAGTAGCTATAACGTTTTCATTATCTCATTCATATGATTTTTATTTAGAATCAATCATTACATATTCTTGTA
CDS Sequence
- >AT3G19810.1
ATGTCTCTGGTTTGCTCTTTATCTTGTGTAGCTCCCTTGCCACAGACTAAACAGTCGCGTCCAAGTTTTCTGAAACTCGAAACATGTACCTTAAGTTTATCTTCTCCCGCTGGCTATCCTAATTTTACCACCGGTATTAGGAAGCATATCAGTTACTTGTTCACTGAACCGATCAAGCTTCCTAGGCTAGCAAAGAGTCGGATATTAGTTAGTCAGGAGTCTTTTACAGAGACCAGCACAATAGATATGGATTGGGAAGATCAGGAGGAAATTGAGGATACTGGGTCACCTTGGGAAGGTTCGGTTATGTATAGGAGAAATGCTTCAGTTACACATGTTGAATATTGCACTACCTTAGAGAGGCTTGGGTTGGGAAGGTTGTCAACAGATGTCTCGAAGAAGAGAGCTTCTGCAATGGGACTTAGAGTGACAAAAGATGTCAAGGATTATCCAGATGGCACACCAGTTCAAGTTTCGGTTGATGTCATAAGGAAGAAGAAGAAGCTGAGACTTGATGGAATTGTCAGGACTGTTATCACACTCGGCTGCAACAGATGTGGTGAGTCAACAGGTGAGAGCATCTTCTCCAACTTCTCGCTATTACTAACCGAAGAGCCAGTTGAAGAACCCGATGTCATTGATCTAGGATTCACATTCGGTAATGACAAAGAAGAAGGCGAAGATGATGATGATAATGATGATTCATGGATAGATTGGGAGGATAAGCTTCATTTTCCACCTGAGGTGAAAGAAATAGATATCTCAAAGCATATAAGAGACTTGGTGCATTTAGAAATCACCATCACTGCGATATGCGATTCTGCATGTAAAGGAATGTGCTTGAAGTGTGGTGCGAATCTGAATAAGAGGAAATGTGATTGTGGCAGAGAAGAGAAGGATAAAGGATATGGACCTCTCGGAAATCTTAGAGAGCAAATGCAACAAAAAGAGGGACTAAGGAACTAA - >AT3G19810.2
ATGTCTCTGGTTTGCTCTTTATCTTGTGTAGCTCCCTTGCCACAGACTAAACAGTCGCGTCCAAGTTTTCTGAAACTCGAAACATGTACCTTAAGTTTATCTTCTCCCGCTGGCTATCCTAATTTTACCACCGGTATTAGGAAGCATATCAGTTACTTGTTCACTGAACCGATCAAGCTTCCTAGGCTAGCAAAGAGTCGGATATTAGTTAGTCAGGAGTCTTTTACAGAGACCAGCACAATAGATATGGATTGGGAAGATCAGGAGGAAATTGAGGATACTGGGTCACCTTGGGAAGGTTCGGTTATGTATAGGAGAAATGCTTCAGTTACACATGTTGAATATTGCACTACCTTAGAGAGGCTTGGGTTGGGAAGGTTGTCAACAGATGTCTCGAAGAAGAGAGCTTCTGCAATGGGACTTAGAGTGACAAAAGATGTCAAGGATTATCCAGATGGCACACCAGTTCAAGTTTCGGTTGATGTCATAAGGAAGAAGAAGAAGCTGAGACTTGATGGAATTGTCAGGACTGTTATCACACTCGGCTGCAACAGATGTGGTGAGTCAACAGGTGAGAGCATCTTCTCCAACTTCTCGCTATTACTAACCGAAGAGCCAGTTGAAGAACCCGATGTCATTGATCTAGGATTCACATTCGGTAATGACAAAGAAGAAGGCGAAGATGATGATGATAATGATGATTCATGGATAGATTGGGAGGATAAGCTTCATTTTCCACCTGAGGTGAAAGAAATAGATATCTCAAAGCATATAAGAGACTTGGTGCATTTAGAAATCACCATCACTGCGATATGCGATTCTGCATGTAAAGGAATGTGCTTGAAGTGTGGTGCGAATCTGAATAAGAGGAAATGTGATTGTGGCAGAGAAGAGAAGGATAAAGGATATGGACCTCTCGGAAATCTTAGAGAGCAAATGCAACAAAAAGAGGGACTAAGGAACTAA
Protein Sequence
- >AT3G19810.1
MSLVCSLSCVAPLPQTKQSRPSFLKLETCTLSLSSPAGYPNFTTGIRKHISYLFTEPIKLPRLAKSRILVSQESFTETSTIDMDWEDQEEIEDTGSPWEGSVMYRRNASVTHVEYCTTLERLGLGRLSTDVSKKRASAMGLRVTKDVKDYPDGTPVQVSVDVIRKKKKLRLDGIVRTVITLGCNRCGESTGESIFSNFSLLLTEEPVEEPDVIDLGFTFGNDKEEGEDDDDNDDSWIDWEDKLHFPPEVKEIDISKHIRDLVHLEITITAICDSACKGMCLKCGANLNKRKCDCGREEKDKGYGPLGNLREQMQQKEGLRN - >AT3G19810.2
MSLVCSLSCVAPLPQTKQSRPSFLKLETCTLSLSSPAGYPNFTTGIRKHISYLFTEPIKLPRLAKSRILVSQESFTETSTIDMDWEDQEEIEDTGSPWEGSVMYRRNASVTHVEYCTTLERLGLGRLSTDVSKKRASAMGLRVTKDVKDYPDGTPVQVSVDVIRKKKKLRLDGIVRTVITLGCNRCGESTGESIFSNFSLLLTEEPVEEPDVIDLGFTFGNDKEEGEDDDDNDDSWIDWEDKLHFPPEVKEIDISKHIRDLVHLEITITAICDSACKGMCLKCGANLNKRKCDCGREEKDKGYGPLGNLREQMQQKEGLRN