Information report for AT3G19810
Gene Details
|
|
Functional Descriptions
- GO:0006364 — acts upstream of or within — rRNA processing
- GO:0009507 — located in — chloroplast
- GO:0003674 — enables — molecular_function
- atduf177a — Homozygotes are embryo lethal
Functional Keywords
Literature and News
- Inactivation of the chloroplast ATP synthase gamma subunit results in high non-photochemical fluorescence quenching and altered nuclear gene expression in Arabidopsis thaliana. DOI: 10.1074/jbc.M308435200 ; PMID: 14576160
- Genome-wide identification of EMBRYO-DEFECTIVE (EMB) genes required for growth and development in Arabidopsis. DOI: 10.1111/nph.16071 ; PMID: 31334862
Gene Resources
- UniProt: A0A5S9XEC4
- EMBL: CACSHJ010000089
- AlphaFoldDB: A0A5S9XEC4
- EnsemblPlants: AT3G19810.1, AT3G19810.2
- Gramene: AT3G19810.1, AT3G19810.2
- KEGG: ath:AT3G19810
- Orthologous matrix: AECVFSN
- ExpressionAtlas: AT3G19810
- InterPro: IPR003772
- PANTHER: PTHR34374, PTHR34374:SF1
- OrthoDB: A0A5S9XEC4
Sequences
cDNA Sequence
- >AT3G19810.1
ATTTCAACTTCTCTCTTTATACCACCACCAACTAGGCTTTAGATCATTCACGACGTGAATCTAAAACACTAAAACCCGACTTTGTTAGTTTTATTGGGGTGCGGTTAGGTTTGATATAAACCTGGAAATACCGGTATTTGAACCGAAGTTGACCGGGTGAGACTTTTTAGGATAAACCCAAGCAGCCATTTCCGAGTAAGAAGAGCTCTGTTTCTGAAAGAAGTTTTACAGAGTCGATCGTCTAAAGCGTTGTTGAAGCACTTGTTAGTGGTGCTCTGTTTCAAGCTGGATAAACCCAATCCTATTGGGATTTGGCTGGATTTTATACCATATTTTAGCATGATTGTTTGATAAACGCTTGATAAATTGCCTCTTGTTGTCACCTTTGCTACGAAAATGTCTCTGGTTTGCTCTTTATCTTGTGTAGCTCCCTTGCCACAGACTAAACAGTCGCGTCCAAGTTTTCTGAAACTCGAAACATGTACCTTAAGTTTATCTTCTCCCGCTGGCTATCCTAATTTTACCACCGGTATTAGGAAGCATATCAGTTACTTGTTCACTGAACCGATCAAGCTTCCTAGGCTAGCAAAGAGTCGGATATTAGTTAGTCAGGAGTCTTTTACAGAGACCAGCACAATAGATATGGATTGGGAAGATCAGGAGGAAATTGAGGATACTGGGTCACCTTGGGAAGGTTCGGTTATGTATAGGAGAAATGCTTCAGTTACACATGTTGAATATTGCACTACCTTAGAGAGGCTTGGGTTGGGAAGGTTGTCAACAGATGTCTCGAAGAAGAGAGCTTCTGCAATGGGACTTAGAGTGACAAAAGATGTCAAGGATTATCCAGATGGCACACCAGTTCAAGTTTCGGTTGATGTCATAAGGAAGAAGAAGAAGCTGAGACTTGATGGAATTGTCAGGACTGTTATCACACTCGGCTGCAACAGATGTGGTGAGTCAACAGGTGAGAGCATCTTCTCCAACTTCTCGCTATTACTAACCGAAGAGCCAGTTGAAGAACCCGATGTCATTGATCTAGGATTCACATTCGGTAATGACAAAGAAGAAGGCGAAGATGATGATGATAATGATGATTCATGGATAGATTGGGAGGATAAGCTTCATTTTCCACCTGAGGTGAAAGAAATAGATATCTCAAAGCATATAAGAGACTTGGTGCATTTAGAAATCACCATCACTGCGATATGCGATTCTGCATGTAAAGGAATGTGCTTGAAGTGTGGTGCGAATCTGAATAAGAGGAAATGTGATTGTGGCAGAGAAGAGAAGGATAAAGGATATGGACCTCTCGGAAATCTTAGAGAGCAAATGCAACAAAAAGAGGGACTAAGGAACTAAACTCAACTCAACGATAATTGTATGTATTTTCCTTTTTACATCTTCATCTTGTTGGTGTTACTGTCATAAAACTCAAAATCAGGTACAATAATGTTCAAATGTGAATCTTAAGTAGCTATAACGTTTTCATTATCTCATTCATATGATTTTTATTTAGAATCAATCATTACATATTCTTGTA - >AT3G19810.2
ATTTCAACTTCTCTCTTTATACCACCACCAACTAGGCTTTAGATCATTCACGACGTGAATCTAAAACACTAAAACCCGACTTTGTTAGTTTTATTGGGGTGCGGTTAGGTTTGATATAAACCTGGAAATACCGGTATTTGAACCGAAGTTGACCGGGTGAGACTTTTTAGGATAAACCCAAGCAGCCATTTCCGAGTAAGAAGAGCTCTGTTTCTGAAAGAAGTTTTACAGAGTCGATCGTCTAAAGCGTTGTTGAAGCACTTGTTAGTGGTGCTCTGTTTCAAGCTGGATAAACCCAATCCTATTGGGATTTGGCTGGATTTTATACCATATTTTAGCATGATTGTTTGATAAACGCTTGATAAATTGCCTCTTGTTGTCACCTTTGCTACGAAAATGTCTCTGGTTTGCTCTTTATCTTGTGTAGCTCCCTTGCCACAGACTAAACAGTCGCGTCCAAGTTTTCTGAAACTCGAAACATGTACCTTAAGTTTATCTTCTCCCGCTGGCTATCCTAATTTTACCACCGGTATTAGGAAGCATATCAGTTACTTGTTCACTGAACCGATCAAGCTTCCTAGGCTAGCAAAGAGTCGGATATTAGTTAGTCAGGAGTCTTTTACAGAGACCAGCACAATAGATATGGATTGGGAAGATCAGGAGGAAATTGAGGATACTGGGTCACCTTGGGAAGGTTCGGTTATGTATAGGAGAAATGCTTCAGTTACACATGTTGAATATTGCACTACCTTAGAGAGGCTTGGGTTGGGAAGGTTGTCAACAGATGTCTCGAAGAAGAGAGCTTCTGCAATGGGACTTAGAGTGACAAAAGATGTCAAGGATTATCCAGATGGCACACCAGTTCAAGTTTCGGTTGATGTCATAAGGAAGAAGAAGAAGCTGAGACTTGATGGAATTGTCAGGACTGTTATCACACTCGGCTGCAACAGATGTGGTGAGTCAACAGGTGAGAGCATCTTCTCCAACTTCTCGCTATTACTAACCGAAGAGCCAGTTGAAGAACCCGATGTCATTGATCTAGGATTCACATTCGGTAATGACAAAGAAGAAGGCGAAGATGATGATGATAATGATGATTCATGGATAGATTGGGAGGATAAGCTTCATTTTCCACCTGAGGTGAAAGAAATAGATATCTCAAAGCATATAAGAGACTTGGTGCATTTAGAAATCACCATCACTGCGATATGCGATTCTGCATGTAAAGGAATGTGCTTGAAGTGTGGTGCGAATCTGAATAAGAGGAAATGTGATTGTGGCAGAGAAGAGAAGGATAAAGGATATGGACCTCTCGGAAATCTTAGAGAGCAAATGCAACAAAAAGAGGGACTAAGGAACTAAACTCAACTCAACGATAATTGTATGTATTTTCCTTTTTACATCTTCATCTTGTTGGTGTTACTGTCATAAAACTCAAAATCAGGTACAATAATGTTCAAATGTGAATCTTAAGTAGCTATAACGTTTTCATTATCTCATTCATATGATTTTTATTTAGAATCAATCATTACATATTCTTGTA
CDS Sequence
- >AT3G19810.1
ATGTCTCTGGTTTGCTCTTTATCTTGTGTAGCTCCCTTGCCACAGACTAAACAGTCGCGTCCAAGTTTTCTGAAACTCGAAACATGTACCTTAAGTTTATCTTCTCCCGCTGGCTATCCTAATTTTACCACCGGTATTAGGAAGCATATCAGTTACTTGTTCACTGAACCGATCAAGCTTCCTAGGCTAGCAAAGAGTCGGATATTAGTTAGTCAGGAGTCTTTTACAGAGACCAGCACAATAGATATGGATTGGGAAGATCAGGAGGAAATTGAGGATACTGGGTCACCTTGGGAAGGTTCGGTTATGTATAGGAGAAATGCTTCAGTTACACATGTTGAATATTGCACTACCTTAGAGAGGCTTGGGTTGGGAAGGTTGTCAACAGATGTCTCGAAGAAGAGAGCTTCTGCAATGGGACTTAGAGTGACAAAAGATGTCAAGGATTATCCAGATGGCACACCAGTTCAAGTTTCGGTTGATGTCATAAGGAAGAAGAAGAAGCTGAGACTTGATGGAATTGTCAGGACTGTTATCACACTCGGCTGCAACAGATGTGGTGAGTCAACAGGTGAGAGCATCTTCTCCAACTTCTCGCTATTACTAACCGAAGAGCCAGTTGAAGAACCCGATGTCATTGATCTAGGATTCACATTCGGTAATGACAAAGAAGAAGGCGAAGATGATGATGATAATGATGATTCATGGATAGATTGGGAGGATAAGCTTCATTTTCCACCTGAGGTGAAAGAAATAGATATCTCAAAGCATATAAGAGACTTGGTGCATTTAGAAATCACCATCACTGCGATATGCGATTCTGCATGTAAAGGAATGTGCTTGAAGTGTGGTGCGAATCTGAATAAGAGGAAATGTGATTGTGGCAGAGAAGAGAAGGATAAAGGATATGGACCTCTCGGAAATCTTAGAGAGCAAATGCAACAAAAAGAGGGACTAAGGAACTAA - >AT3G19810.2
ATGTCTCTGGTTTGCTCTTTATCTTGTGTAGCTCCCTTGCCACAGACTAAACAGTCGCGTCCAAGTTTTCTGAAACTCGAAACATGTACCTTAAGTTTATCTTCTCCCGCTGGCTATCCTAATTTTACCACCGGTATTAGGAAGCATATCAGTTACTTGTTCACTGAACCGATCAAGCTTCCTAGGCTAGCAAAGAGTCGGATATTAGTTAGTCAGGAGTCTTTTACAGAGACCAGCACAATAGATATGGATTGGGAAGATCAGGAGGAAATTGAGGATACTGGGTCACCTTGGGAAGGTTCGGTTATGTATAGGAGAAATGCTTCAGTTACACATGTTGAATATTGCACTACCTTAGAGAGGCTTGGGTTGGGAAGGTTGTCAACAGATGTCTCGAAGAAGAGAGCTTCTGCAATGGGACTTAGAGTGACAAAAGATGTCAAGGATTATCCAGATGGCACACCAGTTCAAGTTTCGGTTGATGTCATAAGGAAGAAGAAGAAGCTGAGACTTGATGGAATTGTCAGGACTGTTATCACACTCGGCTGCAACAGATGTGGTGAGTCAACAGGTGAGAGCATCTTCTCCAACTTCTCGCTATTACTAACCGAAGAGCCAGTTGAAGAACCCGATGTCATTGATCTAGGATTCACATTCGGTAATGACAAAGAAGAAGGCGAAGATGATGATGATAATGATGATTCATGGATAGATTGGGAGGATAAGCTTCATTTTCCACCTGAGGTGAAAGAAATAGATATCTCAAAGCATATAAGAGACTTGGTGCATTTAGAAATCACCATCACTGCGATATGCGATTCTGCATGTAAAGGAATGTGCTTGAAGTGTGGTGCGAATCTGAATAAGAGGAAATGTGATTGTGGCAGAGAAGAGAAGGATAAAGGATATGGACCTCTCGGAAATCTTAGAGAGCAAATGCAACAAAAAGAGGGACTAAGGAACTAA
Protein Sequence
- >AT3G19810.1
MSLVCSLSCVAPLPQTKQSRPSFLKLETCTLSLSSPAGYPNFTTGIRKHISYLFTEPIKLPRLAKSRILVSQESFTETSTIDMDWEDQEEIEDTGSPWEGSVMYRRNASVTHVEYCTTLERLGLGRLSTDVSKKRASAMGLRVTKDVKDYPDGTPVQVSVDVIRKKKKLRLDGIVRTVITLGCNRCGESTGESIFSNFSLLLTEEPVEEPDVIDLGFTFGNDKEEGEDDDDNDDSWIDWEDKLHFPPEVKEIDISKHIRDLVHLEITITAICDSACKGMCLKCGANLNKRKCDCGREEKDKGYGPLGNLREQMQQKEGLRN - >AT3G19810.2
MSLVCSLSCVAPLPQTKQSRPSFLKLETCTLSLSSPAGYPNFTTGIRKHISYLFTEPIKLPRLAKSRILVSQESFTETSTIDMDWEDQEEIEDTGSPWEGSVMYRRNASVTHVEYCTTLERLGLGRLSTDVSKKRASAMGLRVTKDVKDYPDGTPVQVSVDVIRKKKKLRLDGIVRTVITLGCNRCGESTGESIFSNFSLLLTEEPVEEPDVIDLGFTFGNDKEEGEDDDDNDDSWIDWEDKLHFPPEVKEIDISKHIRDLVHLEITITAICDSACKGMCLKCGANLNKRKCDCGREEKDKGYGPLGNLREQMQQKEGLRN