Information report for AT3G19770
Gene Details
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Functional Descriptions
- GO:0000919 — acts upstream of or within — cell plate assembly
- GO:0005515 — enables — protein binding
- GO:0030139 — is active in — endocytic vesicle
- GO:0045324 — acts upstream of or within — late endosome to vacuole transport
- GO:0048528 — acts upstream of or within — post-embryonic root development
- GO:0005737 — located in — cytoplasm
- GO:0009793 — acts upstream of or within — embryo development ending in seed dormancy
- GO:0005829 — is active in — cytosol
- GO:0042546 — acts upstream of or within — cell wall biogenesis
- GO:0016192 — involved in — vesicle-mediated transport
- GO:0031267 — enables — small GTPase binding
- GO:0005085 — enables — guanyl-nucleotide exchange factor activity
- SALK_018174 — Embryogenesis was arrested at the torpedo stage. Accumulate abnormal membrane structures. PIN1-GFP lost the polarity and resided on the entire region of the plasma membrane in the cells of the mutant embryos.
- puf2 vps9a-2 — seedling lethality
- vps9a-2 — elongation of the primary root was severely affected
Functional Keywords
Literature and News
- Analysis of the small GTPase gene superfamily of Arabidopsis. DOI: 10.1104/pp.013052 ; PMID: 12644670
- Isolation and functional analysis of Arabidopsis stress-inducible NAC transcription factors that bind to a drought-responsive cis-element in the early responsive to dehydration stress 1 promoter. DOI: 10.1105/tpc.104.022699 ; PMID: 15319476
- VPS9a, the common activator for two distinct types of Rab5 GTPases, is essential for the development of Arabidopsis thaliana. DOI: 10.1105/tpc.107.053876 ; PMID: 18055610
- Site-specific phosphorylation profiling of Arabidopsis proteins by mass spectrometry and peptide chip analysis. DOI: 10.1021/pr8000173 ; PMID: 18433157
- Global analysis of Arabidopsis gene expression uncovers a complex array of changes impacting pathogen response and cell cycle during geminivirus infection. DOI: 10.1104/pp.108.121038 ; PMID: 18650403
- Species specific amino acid sequence-protein local structure relationships: An analysis in the light of a structural alphabet. DOI: 10.1016/j.jtbi.2011.01.047 ; PMID: 21333657
- Myrosin cell development is regulated by endocytosis machinery and PIN1 polarity in leaf primordia of Arabidopsis thaliana. DOI: 10.1105/tpc.114.131441 ; PMID: 25428982
- Integration of two RAB5 groups during endosomal transport in plants. DOI: 10.7554/eLife.34064 ; PMID: 29749929
- Genome-wide identification of EMBRYO-DEFECTIVE (EMB) genes required for growth and development in Arabidopsis. DOI: 10.1111/nph.16071 ; PMID: 31334862
- Membrane proteomic analysis of Arabidopsis thaliana using alternative solubilization techniques. DOI: 10.1021/pr060525b ; PMID: 17432890
- Site-specific phosphorylation profiling of Arabidopsis proteins by mass spectrometry and peptide chip analysis. DOI: 10.1021/pr8000173 ; PMID: 18433157
- Membrane proteomic analysis of Arabidopsis thaliana using alternative solubilization techniques. DOI: 10.1021/pr060525b ; PMID: 17432890
- Site-specific phosphorylation profiling of Arabidopsis proteins by mass spectrometry and peptide chip analysis. DOI: 10.1021/pr8000173 ; PMID: 18433157
Gene Resources
- UniProt: F4JCD2
- EMBL: CP002686
- AlphaFoldDB: F4JCD2
- EnsemblPlants: AT3G19770.2
- Gramene: AT3G19770.2
- ExpressionAtlas: AT3G19770
- InterPro: IPR003123, IPR037191, IPR045046
- PANTHER: PTHR23101, PTHR23101:SF25
- SUPFAM: SSF109993
- PROSITE: PS51205
- Gene3D: 1.20.1050.80
- OrthoDB: F4JCD2
- SWISS-MODEL: F4JCD2
Homologs
- Oryza sativa GLUP6;GEF
Sequences
cDNA Sequence
- >AT3G19770.2
AATAAATAAACGACCGTGGTTTTGTTTGTTTATTGGTAGTCAGCGACACGGAACTCATTAACTTTACTCTTCTCACTGGTCAATCGTCGGAGATAATCGGGTGATCGGCGATGGAGAATACGGACGTCTTCTTGGGGCTGCATGATTTCCTGGAGCGGATGCGCAAACCCTCCGCCGGCGATTTCGTCAAATCCATTAAAAGTTTCATTGTTTCATTCTCGAACAATGCACCAGACCCGGAAAAAGATTGTGCTATGGTTCAGGAGTTCTTTTCTAAGATGGAGGCTGCTTTCAGGGCTCATCCACTTTGGTCTGGTTGTTCTGAGGAGGAATTGGATAGTGCTGGAGATGGCCTGGAGAAGTATGTTATGACAAAGCTATTTACTCGGGTGTTTGCTTCAAACACTGAGGAGGTTATAGCTGATGAGAAGCTATTTCAGAAGATGTCATTGGTTCAACAATTCATTTCTCCCGAGAATTTGGATATACAACCAACTTTTCAAAATGAATCGTCATGGCTGCTCAAAAAGAGCTCCAGAAGATAAACATGTACAAAGCTCCTCGTGATAAGCTTGTGTGTATCCTTAACTGTTGCAAAGTGATTAATAACTTACTGCTAAATGCTTCAATTGCTTCAAACGAGAATGCACCTGGAGCAGACGAATTTCTTCCTGTTTTGATATATGTAACAATAAAGGCTAACCCTCCACAACTTCACTCAAACTTGTTGTATATACAAAGGTATAGGCGTGAATCTAAACTTGTTGGTGAAGCTGCGTACTTCTTCACAAACATACTCTCTGCAGAGTCTTTCATCTCAAATATTGATGCAAAATCTATTTCACTGGATGAAGCTGAGTTTGAAAAGAACATGGAATCTGCACGGGCACGAATTTCTGGTTTGGACAGCCAGACTTATCAAACTGGTCATGGCTCTGCACCACCCCCTCGTGATGAGTCCACTCTTCAGAAAACTCAAAGTCTGAATCCCAAGAGGGAAAACACTCTTTTCCAATCAAAATCGTCTGATAGTCTTTCTGGGACCAACGAATTACTGAATATAAACAGTGAAACACCAATGAAGAAAGCTGAATCCATTTCAGATTTGGAAAATAAGGGTGCGACGCTTCTGAAGGATACCGAGCCAAGCAAAGTCTTTCAAGAATATCCTTACATATTTGCCAGTGCTGGTGATTTGAGGATAGGAGATGTTGAAGGCTTGTTAAATAGTTATAAACAGCTCGTTTTCAAATATGTGTGCCTTACCAAAGGATTGGGTGATGGAACATCTTTAGCTCCATCCAGTTCACCCTTGCAAGCGTCGTCCGGTTTTAATACGTCTAAGGAATCTGAGGATCATAGAAGATCGTCTTCAGATGTACAAATGACAAAGGAAACTGACAGGAGTGTTGATGATTTGATCCGAGCTCTACATGGTGAAGGGGAAGATGTTAACAATCTGTCAGATGTAAAACATGAAGAATATGGCGCAATGTTGGTAGAGGGAAAGGATGAAGAACGTGATTCCAAGGTGCAAGGAGAAGTAGATGCCAAAGATATTGAATTGATGAAGCAAATTCCTAAGAGAGAAGGTGACAATTCTAGTTCCCGACCTGCAGAAGATGAAGATGTTGGTTCCAAACAGCCAGTTACGGAAGCTTCTGAGTGAGCCAAATGACCCATCTTGGTGATGAGAGTCTCTTGTATCGGATCAATTATTCATTTAATGGGGGAAGCAAAGGTCAAGTCATAGTTAAGATGTCATCTATTCGTTTCTTGGAGTTATGAGTTTTGAAGATGACTGGAGAGCCGTATGAGACGGAAGCTATCTGCATCTGTATTCCCTTGGAAAAGAGGGGCAGTCAAATGGTAAATTACTTTCTTCAATTGTGTTTCTTTTTTTGCTCTTTGTTTCTCAGTGATATGATTTTGGAGGGGCTCGTCAACATTTGTCAATCCATATGTAACTCTTACATCTGCTATTGCGTATATACAATAAGGATATAATCAGAATAATATTTGCCAAGCTGTTAG - >AT3G19770.1
AATAAATAAACGACCGTGGTTTTGTTTGTTTATTGGTAGTCAGCGACACGGAACTCATTAACTTTACTCTTCTCACTGGTCAATCGTCGGAGATAATCGGGTGATCGGCGATGGAGAATACGGACGTCTTCTTGGGGCTGCATGATTTCCTGGAGCGGATGCGCAAACCCTCCGCCGGCGATTTCGTCAAATCCATTAAAAGTTTCATTGTTTCATTCTCGAACAATGCACCAGACCCGGAAAAAGATTGTGCTATGGTTCAGGAGTTCTTTTCTAAGATGGAGGCTGCTTTCAGGGCTCATCCACTTTGGTCTGGTTGTTCTGAGGAGGAATTGGATAGTGCTGGAGATGGCCTGGAGAAGTATGTTATGACAAAGCTATTTACTCGGGTGTTTGCTTCAAACACTGAGGAGGTTATAGCTGATGAGAAGCTATTTCAGAAGATGTCATTGGTTCAACAATTCATTTCTCCCGAGAATTTGGATATACAACCAACTTTTCAAAATGAATCGTCATGGCTGCTCAAAAAGAGCTCCAGAAGATAAACATGTACAAAGCTCCTCGTGATAAGCTTGTGTGTATCCTTAACTGTTGCAAAGTGATTAATAACTTACTGCTAAATGCTTCAATTGCTTCAAACGAGAATGCACCTGGAGCAGACGAATTTCTTCCTGTTTTGATATATGTAACAATAAAGGCTAACCCTCCACAACTTCACTCAAACTTGTTGTATATACAAAGGTATAGGCGTGAATCTAAACTTGTTGGTGAAGCTGCGTACTTCTTCACAAACATACTCTCTGCAGAGTCTTTCATCTCAAATATTGATGCAAAATCTATTTCACTGGATGAAGCTGAGTTTGAAAAGAACATGGAATCTGCACGGGCACGAATTTCTGGTTTGGACAGCCAGACTTATCAAACTGGTCATGGCTCTGCACCACCCCCTCGTGATGAGTCCACTCTTCAGAAAACTCAAAGTCTGAATCCCAAGAGGGAAAACACTCTTTTCCAATCAAAATCGTCTGATAGTCTTTCTGGGACCAACGAATTACTGAATATAAACAGTGAAACACCAATGAAGAAAGCTGAATCCATTTCAGATTTGGAAAATAAGGGTGCGACGCTTCTGAAGGATACCGAGCCAAGCAAAGTCTTTCAAGAATATCCTTACATATTTGCCAGTGCTGGTGATTTGAGGATAGGAGATGTTGAAGGCTTGTTAAATAGTTATAAACAGCTCGTTTTCAAATATGTGTGCCTTACCAAAGGATTGGGTGATGGAACATCTTTAGCTCCATCCAGTTCACCCTTGCAAGCGTCGTCCGGTTTTAATACGTCTAAGGAATCTGAGGATCATAGAAGATCGTCTTCAGATGTACAAATGACAAAGGAAACTGACAGGAGTGTTGATGATTTGATCCGAGCTCTACATGGTGAAGGGGAAGATGTTAACAATCTGTCAGATGTAAAACATGAAGAATATGGCGCAATGTTGGTAGAGGGAAAGGATGAAGAACGTGATTCCAAGGTGCAAGGAGAAGTAGATGCCAAAGATATTGAATTGATGAAGCAAATTCCTAAGAGAGAAGGTGACAATTCTAGTTCCCGACCTGCAGAAGATGAAGATGTTGGTTCCAAACAGCCAGTTACGGAAGCTTCTGAGTGAGCCAAATGACCCATCTTGGTGATGAGAGTCTCTTGTATCGGATCAATTATTCATTTAATGGGGGAAGCAAAGGTCAAGTCATAGTTAAGATGTCATCTATTCGTTTCTTGGAGTTATGAGTTTTGAAGATGACTGGAGAGCCGTATGAGACGGAAGCTATCTGCATCTGTATTCCCTTGGAAAAGAGGGGCAGTCAAATGGTAAATTACTTTCTTCAATTGTGTTTCTTTTTTTGCTCTTTGTTTCTCAGTGATATGATTTTGGAGGGGCTCGTCAACATTTGTCAATCCATATGTAACTCTTACATCTGCTATTGCGTATATACAATAAGGATATAATCAGAATAATATTTGCCAAGCTGTTAG
CDS Sequence
- >AT3G19770.2
ATGGCTGCTCAAAAAGAGCTCCAGAAGATAAACATGTACAAAGCTCCTCGTGATAAGCTTGTGTGTATCCTTAACTGTTGCAAAGTGATTAATAACTTACTGCTAAATGCTTCAATTGCTTCAAACGAGAATGCACCTGGAGCAGACGAATTTCTTCCTGTTTTGATATATGTAACAATAAAGGCTAACCCTCCACAACTTCACTCAAACTTGTTGTATATACAAAGGTATAGGCGTGAATCTAAACTTGTTGGTGAAGCTGCGTACTTCTTCACAAACATACTCTCTGCAGAGTCTTTCATCTCAAATATTGATGCAAAATCTATTTCACTGGATGAAGCTGAGTTTGAAAAGAACATGGAATCTGCACGGGCACGAATTTCTGGTTTGGACAGCCAGACTTATCAAACTGGTCATGGCTCTGCACCACCCCCTCGTGATGAGTCCACTCTTCAGAAAACTCAAAGTCTGAATCCCAAGAGGGAAAACACTCTTTTCCAATCAAAATCGTCTGATAGTCTTTCTGGGACCAACGAATTACTGAATATAAACAGTGAAACACCAATGAAGAAAGCTGAATCCATTTCAGATTTGGAAAATAAGGGTGCGACGCTTCTGAAGGATACCGAGCCAAGCAAAGTCTTTCAAGAATATCCTTACATATTTGCCAGTGCTGGTGATTTGAGGATAGGAGATGTTGAAGGCTTGTTAAATAGTTATAAACAGCTCGTTTTCAAATATGTGTGCCTTACCAAAGGATTGGGTGATGGAACATCTTTAGCTCCATCCAGTTCACCCTTGCAAGCGTCGTCCGGTTTTAATACGTCTAAGGAATCTGAGGATCATAGAAGATCGTCTTCAGATGTACAAATGACAAAGGAAACTGACAGGAGTGTTGATGATTTGATCCGAGCTCTACATGGTGAAGGGGAAGATGTTAACAATCTGTCAGATGTAAAACATGAAGAATATGGCGCAATGTTGGTAGAGGGAAAGGATGAAGAACGTGATTCCAAGGTGCAAGGAGAAGTAGATGCCAAAGATATTGAATTGATGAAGCAAATTCCTAAGAGAGAAGGTGACAATTCTAGTTCCCGACCTGCAGAAGATGAAGATGTTGGTTCCAAACAGCCAGTTACGGAAGCTTCTGAGTGA - >AT3G19770.1
ATGGCTGCTCAAAAAGAGCTCCAGAAGATAAACATGTACAAAGCTCCTCGTGATAAGCTTGTGTGTATCCTTAACTGTTGCAAAGTGATTAATAACTTACTGCTAAATGCTTCAATTGCTTCAAACGAGAATGCACCTGGAGCAGACGAATTTCTTCCTGTTTTGATATATGTAACAATAAAGGCTAACCCTCCACAACTTCACTCAAACTTGTTGTATATACAAAGGTATAGGCGTGAATCTAAACTTGTTGGTGAAGCTGCGTACTTCTTCACAAACATACTCTCTGCAGAGTCTTTCATCTCAAATATTGATGCAAAATCTATTTCACTGGATGAAGCTGAGTTTGAAAAGAACATGGAATCTGCACGGGCACGAATTTCTGGTTTGGACAGCCAGACTTATCAAACTGGTCATGGCTCTGCACCACCCCCTCGTGATGAGTCCACTCTTCAGAAAACTCAAAGTCTGAATCCCAAGAGGGAAAACACTCTTTTCCAATCAAAATCGTCTGATAGTCTTTCTGGGACCAACGAATTACTGAATATAAACAGTGAAACACCAATGAAGAAAGCTGAATCCATTTCAGATTTGGAAAATAAGGGTGCGACGCTTCTGAAGGATACCGAGCCAAGCAAAGTCTTTCAAGAATATCCTTACATATTTGCCAGTGCTGGTGATTTGAGGATAGGAGATGTTGAAGGCTTGTTAAATAGTTATAAACAGCTCGTTTTCAAATATGTGTGCCTTACCAAAGGATTGGGTGATGGAACATCTTTAGCTCCATCCAGTTCACCCTTGCAAGCGTCGTCCGGTTTTAATACGTCTAAGGAATCTGAGGATCATAGAAGATCGTCTTCAGATGTACAAATGACAAAGGAAACTGACAGGAGTGTTGATGATTTGATCCGAGCTCTACATGGTGAAGGGGAAGATGTTAACAATCTGTCAGATGTAAAACATGAAGAATATGGCGCAATGTTGGTAGAGGGAAAGGATGAAGAACGTGATTCCAAGGTGCAAGGAGAAGTAGATGCCAAAGATATTGAATTGATGAAGCAAATTCCTAAGAGAGAAGGTGACAATTCTAGTTCCCGACCTGCAGAAGATGAAGATGTTGGTTCCAAACAGCCAGTTACGGAAGCTTCTGAGTGA
Protein Sequence
- >AT3G19770.2
MAAQKELQKINMYKAPRDKLVCILNCCKVINNLLLNASIASNENAPGADEFLPVLIYVTIKANPPQLHSNLLYIQRYRRESKLVGEAAYFFTNILSAESFISNIDAKSISLDEAEFEKNMESARARISGLDSQTYQTGHGSAPPPRDESTLQKTQSLNPKRENTLFQSKSSDSLSGTNELLNINSETPMKKAESISDLENKGATLLKDTEPSKVFQEYPYIFASAGDLRIGDVEGLLNSYKQLVFKYVCLTKGLGDGTSLAPSSSPLQASSGFNTSKESEDHRRSSSDVQMTKETDRSVDDLIRALHGEGEDVNNLSDVKHEEYGAMLVEGKDEERDSKVQGEVDAKDIELMKQIPKREGDNSSSRPAEDEDVGSKQPVTEASE - >AT3G19770.1
MAAQKELQKINMYKAPRDKLVCILNCCKVINNLLLNASIASNENAPGADEFLPVLIYVTIKANPPQLHSNLLYIQRYRRESKLVGEAAYFFTNILSAESFISNIDAKSISLDEAEFEKNMESARARISGLDSQTYQTGHGSAPPPRDESTLQKTQSLNPKRENTLFQSKSSDSLSGTNELLNINSETPMKKAESISDLENKGATLLKDTEPSKVFQEYPYIFASAGDLRIGDVEGLLNSYKQLVFKYVCLTKGLGDGTSLAPSSSPLQASSGFNTSKESEDHRRSSSDVQMTKETDRSVDDLIRALHGEGEDVNNLSDVKHEEYGAMLVEGKDEERDSKVQGEVDAKDIELMKQIPKREGDNSSSRPAEDEDVGSKQPVTEASE