Gene Details:

• Gene ID: AT3G19770
• Gene Symbol: ATVPS9A, VPS9, VPS9A
• Gene Name: ARABIDOPSIS THALIANA VACUOLAR PROTEIN SORTING 9A
• Description: Vacuolar sorting protein 9 (VPS9) domain-containing protein;(source:Araport11)
• TAIR Accession: locus:2092211
• Genome: Araport11_genome_release
• Species: Arabidopsis thaliana

Transcripts:

• AT3G19770.1     AT3G19770.2

Gene Ontology:

• GO:0000919  — acts upstream of or within — cell plate assembly
• GO:0005515  — enables — protein binding
• GO:0030139  — is active in — endocytic vesicle
• GO:0045324  — acts upstream of or within — late endosome to vacuole transport
• GO:0048528  — acts upstream of or within — post-embryonic root development
• GO:0005737  — located in — cytoplasm
• GO:0009793  — acts upstream of or within — embryo development ending in seed dormancy
• GO:0005829  — is active in — cytosol
• GO:0042546  — acts upstream of or within — cell wall biogenesis
• GO:0016192  — involved in — vesicle-mediated transport
• GO:0031267  — enables — small GTPase binding
• GO:0005085  — enables — guanyl-nucleotide exchange factor activity

Germplasm Phenotype:

• SALK_018174  — Embryogenesis was arrested at the torpedo stage. Accumulate abnormal membrane structures. PIN1-GFP lost the polarity and resided on the entire region of the plasma membrane in the cells of the mutant embryos.
• puf2 vps9a-2  — seedling lethality
• vps9a-2  — elongation of the primary root was severely affected

Literature:

• Analysis of the small GTPase gene superfamily of Arabidopsis.   DOI:  10.1104/pp.013052 ;  PMID:  12644670
• Isolation and functional analysis of Arabidopsis stress-inducible NAC transcription factors that bind to a drought-responsive cis-element in the early responsive to dehydration stress 1 promoter.   DOI:  10.1105/tpc.104.022699 ;  PMID:  15319476
• VPS9a, the common activator for two distinct types of Rab5 GTPases, is essential for the development of Arabidopsis thaliana.   DOI:  10.1105/tpc.107.053876 ;  PMID:  18055610
• Site-specific phosphorylation profiling of Arabidopsis proteins by mass spectrometry and peptide chip analysis.   DOI:  10.1021/pr8000173 ;  PMID:  18433157
• Global analysis of Arabidopsis gene expression uncovers a complex array of changes impacting pathogen response and cell cycle during geminivirus infection.   DOI:  10.1104/pp.108.121038 ;  PMID:  18650403
• Species specific amino acid sequence-protein local structure relationships: An analysis in the light of a structural alphabet.   DOI:  10.1016/j.jtbi.2011.01.047 ;  PMID:  21333657
• Myrosin cell development is regulated by endocytosis machinery and PIN1 polarity in leaf primordia of Arabidopsis thaliana.   DOI:  10.1105/tpc.114.131441 ;  PMID:  25428982
• Integration of two RAB5 groups during endosomal transport in plants.   DOI:  10.7554/eLife.34064 ;  PMID:  29749929
• Genome-wide identification of EMBRYO-DEFECTIVE (EMB) genes required for growth and development in Arabidopsis.   DOI:  10.1111/nph.16071 ;  PMID:  31334862
• Membrane proteomic analysis of Arabidopsis thaliana using alternative solubilization techniques.   DOI:  10.1021/pr060525b ;  PMID:  17432890
• Site-specific phosphorylation profiling of Arabidopsis proteins by mass spectrometry and peptide chip analysis.   DOI:  10.1021/pr8000173 ;  PMID:  18433157
• Membrane proteomic analysis of Arabidopsis thaliana using alternative solubilization techniques.   DOI:  10.1021/pr060525b ;  PMID:  17432890
• Site-specific phosphorylation profiling of Arabidopsis proteins by mass spectrometry and peptide chip analysis.   DOI:  10.1021/pr8000173 ;  PMID:  18433157

Sequences: