Information report for AT3G19580
Gene Details
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Functional Descriptions
- PO:0000025 — root tip — punta de la raíz (Spanish, exact), 根端 (Japanese, exact)
- PO:0000084 — plant sperm cell — célula espermática o esperma (Spanish, exact), male gamete (exact), microgamete (exact), 植物精子細胞 (Japanese, exact), sperm nucleus (related), sperm cell (broad)
- PO:0025195 — pollen tube cell — célula del tubo polínico (Spanish, exact), 花粉管細胞 (Japanese, exact)
- GO:0000976 — enables — transcription cis-regulatory region binding
- GO:0009793 — acts upstream of or within — embryo development ending in seed dormancy
- GO:0005634 — located in — nucleus
- GO:0006355 — involved in — regulation of DNA-templated transcription
- GO:0009414 — acts upstream of or within — response to water deprivation
- GO:0009737 — involved in — response to abscisic acid
- GO:0045892 — acts upstream of or within — negative regulation of DNA-templated transcription
- GO:0043565 — enables — sequence-specific DNA binding
- GO:0042538 — acts upstream of or within — hyperosmotic salinity response
- GO:0009737 — acts upstream of or within — response to abscisic acid
- GO:0003677 — enables — DNA binding
- GO:0005634 — is active in — nucleus
- GO:0003700 — enables — DNA-binding transcription factor activity
Functional Keywords
Literature and News
- Functional identification of an Arabidopsis snf4 ortholog by screening for heterologous multicopy suppressors of snf4 deficiency in yeast. DOI: 10.1046/j.1365-313x.2000.00809.x ; PMID: 10929106
- Expression of a subset of the Arabidopsis Cys(2)/His(2)-type zinc-finger protein gene family under water stress. DOI: 10.1016/s0378-1119(00)00133-5 ; PMID: 10806347
- Arabidopsis transcription factors: genome-wide comparative analysis among eukaryotes. DOI: 10.1126/science.290.5499.2105 ; PMID: 11118137
- A genome-wide analysis of blue-light regulation of Arabidopsis transcription factor gene expression during seedling development. DOI: 10.1104/pp.103.029439 ; PMID: 14605227
- Conservation, diversification and expansion of C2H2 zinc finger proteins in the Arabidopsis thaliana genome. DOI: 10.1186/1471-2164-5-39 ; PMID: 15236668
- Binding of arabinogalactan proteins by Yariv phenylglycoside triggers wound-like responses in Arabidopsis cell cultures. DOI: 10.1104/pp.104.039370 ; PMID: 15235117
- Arabidopsis Cys2/His2-type zinc-finger proteins function as transcription repressors under drought, cold, and high-salinity stress conditions. DOI: 10.1104/pp.104.046599 ; PMID: 15333755
- Cesium toxicity in Arabidopsis. DOI: 10.1104/pp.104.046672 ; PMID: 15489280
- Enhanced tolerance to environmental stress in transgenic plants expressing the transcriptional coactivator multiprotein bridging factor 1c. DOI: 10.1104/pp.105.070110 ; PMID: 16244138
- Type III effectors orchestrate a complex interplay between transcriptional networks to modify basal defence responses during pathogenesis and resistance. DOI: 10.1111/j.1365-313X.2006.02672.x ; PMID: 16553893
- Transcriptional regulators of stamen development in Arabidopsis identified by transcriptional profiling. DOI: 10.1111/j.1365-313X.2006.02756.x ; PMID: 16805732
- Different plant hormones regulate similar processes through largely nonoverlapping transcriptional responses. DOI: 10.1016/j.cell.2006.05.050 ; PMID: 16901781
- Integration of Arabidopsis thaliana stress-related transcript profiles, promoter structures, and cell-specific expression. DOI: 10.1186/gb-2007-8-4-r49 ; PMID: 17408486
- Identification of 118 Arabidopsis transcription factor and 30 ubiquitin-ligase genes responding to chitin, a plant-defense elicitor. DOI: 10.1094/MPMI-20-8-0900 ; PMID: 17722694
- Mapping methyl jasmonate-mediated transcriptional reprogramming of metabolism and cell cycle progression in cultured Arabidopsis cells. DOI: 10.1073/pnas.0711203105 ; PMID: 18216250
- Global analysis of Arabidopsis gene expression uncovers a complex array of changes impacting pathogen response and cell cycle during geminivirus infection. DOI: 10.1104/pp.108.121038 ; PMID: 18650403
- Transcriptome analyses show changes in gene expression to accompany pollen germination and tube growth in Arabidopsis. DOI: 10.1104/pp.108.126375 ; PMID: 18775970
- Fine-tuning of early events in the jasmonate response. DOI: 10.4161/psb.3.10.5993 ; PMID: 20140232
- Arabidopsis Cys2/His2 zinc-finger proteins AZF1 and AZF2 negatively regulate abscisic acid-repressive and auxin-inducible genes under abiotic stress conditions. DOI: 10.1104/pp.111.182683 ; PMID: 21852415
- Enhanced Y1H assays for Arabidopsis. DOI: 10.1038/nmeth.1750 ; PMID: 22037706
- Differential Contribution of Transcription Factors to Arabidopsis thaliana Defense Against Spodoptera littoralis. DOI: 10.3389/fpls.2013.00013 ; PMID: 23382734
- Four distinct types of dehydration stress memory genes in Arabidopsis thaliana. DOI: 10.1186/1471-2229-13-229 ; PMID: 24377444
- An Arabidopsis gene regulatory network for secondary cell wall synthesis. DOI: 10.1038/nature14099 ; PMID: 25533953
- Transcriptional regulation of nitrogen-associated metabolism and growth. DOI: 10.1038/s41586-018-0656-3 ; PMID: 30356219
- A PXY-Mediated Transcriptional Network Integrates Signaling Mechanisms to Control Vascular Development in Arabidopsis. DOI: 10.1105/tpc.19.00562 ; PMID: 31806676
- Systematic identification of genes associated with plant growth-defense tradeoffs under JA signaling in Arabidopsis. DOI: 10.1007/s00425-019-03335-8 ; PMID: 31907627
- Repressive ZINC FINGER OF ARABIDOPSIS THALIANA proteins promote programmed cell death in the Arabidopsis columella root cap. DOI: 10.1093/plphys/kiad130 ; PMID: 36852889
- Arabidopsis transcription factors: genome-wide comparative analysis among eukaryotes. DOI: 10.1126/science.290.5499.2105 ; PMID: 11118137
- Identification of 118 Arabidopsis transcription factor and 30 ubiquitin-ligase genes responding to chitin, a plant-defense elicitor. DOI: 10.1094/MPMI-20-8-0900 ; PMID: 17722694
Gene Resources
- UniProt: A0A178VJ97
- EMBL: CACRSJ010000106, CACSHJ010000089, LR881468
- AlphaFoldDB: A0A178VJ97
- EnsemblPlants: AT3G19580.1, AT3G19580.2
- Gramene: AT3G19580.1, AT3G19580.2
- KEGG: ath:AT3G19580
- Orthologous matrix: DHDQVIK
- ExpressionAtlas: AT3G19580
- InterPro: IPR013087, IPR036236, IPR044653
- PANTHER: PTHR45988, PTHR45988:SF1
- SUPFAM: SSF57667
- PROSITE: PS00028, PS50157
- Gene3D: 3.30.160.60
- OrthoDB: A0A178VJ97
Homologs
- Brassica napus GSBRNA2T00137396001, GSBRNA2T00107392001, GSBRNA2T00101181001, GSBRNA2T00074402001, GSBRNA2T00083347001
- Brassica oleracea XP_013638501.1, XP_013618462.1
- Brassica rapa XP_009111687.1, XP_009145772.1, XP_009145771.1
- Raphanus raphanistrum RrC7343_p1, RrC2879_p3
Sequences
cDNA Sequence
- >AT3G19580.2
ATGGCCCTCGAAGCGATGAACACTCCAACTTCTTCTTTCACCAGAATCGAAACGAAAGAAGATTTGATGAACGACGCCGTTTTCATTGAGCCGTGGCTTAAACGCAAACGCTCCAAACGTCAGCGTTCTCACAGCCCTTCTTCGTCTTCTTCCTCACCGCCTCGATCTCGACCCAAATCCCAGAATCAAGATCTTACGGAAGAAGAGTATCTCGCTCTTTGTCTCCTCATGCTCGCTAAAGATCAACCGTCGCAAACGCGATTTCATCAACAGTCGCAATCGTTAACGCCGCCGCCAGAATCAAAGAACCTTCCGTACAAGTGTAACGTCTGTGAAAAAGCGTTTCCTTCCTATCAGGCTTTAGGCGGTCACAAAGCAAGTCACCGAATCAAACCACCAACCGTAATCTCAACAACCGCCGATGATTCAACAGCTCCGACCATCTCCATCGTCGCCGGAGAAAAACATCCGATTGCTGCCTCCGGAAAGATCCACGAGTGTTCAATCTGTCATAAAGTGTTTCCGACGGGTCAAGCTTTAGGCGGTCACAAACGTTGTCACTACGAAGGCAACCTCGGCGGCGGAGGAGGAGGAGGAAGCAAATCAATCAGTCACAGTGGAAGCGTGTCGAGCACGGTATCGGAAGAAAGGAGCCACCGTGGATTCATCGATCTAAACCTACCGGCGTTACCTGAACTCAGCCTTCATCACAATCCAATCGTCGACGAAGAGATCTTGAGTCCGTTGACCGGTAAAAAACCGCTTTTGTTGACCGATCACGACCAAGTCATCAAGAAAGAAGATTTATCTTTAAAAATCTAATACTCGACTATTAATTCTTGTTTTCATTTTCATTTTTTTAGTTACAAATTTTTAATTGTTCTGATTTGGATTGAATATTGGTATATTGTTAGGGGTTGATACAAAAATTTGATGATTGATTAAGTCAGAATTTCTTATTTATTTTGGTAACTAATCTCTTGATCAGTCCACTCTGTATAAATATTGCGTGGCATTA - >AT3G19580.1
ATGGCCCTCGAAGCGATGAACACTCCAACTTCTTCTTTCACCAGAATCGAAACGAAAGAAGATTTGATGAACGACGCCGTTTTCATTGAGCCGTGGCTTAAACGCAAACGCTCCAAACGTCAGCGTTCTCACAGCCCTTCTTCGTCTTCTTCCTCACCGCCTCGATCTCGACCCAAATCCCAGAATCAAGATCTTACGGAAGAAGAGTATCTCGCTCTTTGTCTCCTCATGCTCGCTAAAGATCAACCGTCGCAAACGCGATTTCATCAACAGTCGCAATCGTTAACGCCGCCGCCAGAATCAAAGAACCTTCCGTACAAGTGTAACGTCTGTGAAAAAGCGTTTCCTTCCTATCAGGCTTTAGGCGGTCACAAAGCAAGTCACCGAATCAAACCACCAACCGTAATCTCAACAACCGCCGATGATTCAACAGCTCCGACCATCTCCATCGTCGCCGGAGAAAAACATCCGATTGCTGCCTCCGGAAAGATCCACGAGTGTTCAATCTGTCATAAAGTGTTTCCGACGGGTCAAGCTTTAGGCGGTCACAAACGTTGTCACTACGAAGGCAACCTCGGCGGCGGAGGAGGAGGAGGAAGCAAATCAATCAGTCACAGTGGAAGCGTGTCGAGCACGGTATCGGAAGAAAGGAGCCACCGTGGATTCATCGATCTAAACCTACCGGCGTTACCTGAACTCAGCCTTCATCACAATCCAATCGTCGACGAAGAGATCTTGAGTCCGTTGACCGGTAAAAAACCGCTTTTGTTGACCGATCACGACCAAGTCATCAAGAAAGAAGATTTATCTTTAAAAATCTAATACTCGACTATTAATTCTTGTTTTCATTTTCATTTTTTTAGTTACAAATTTTTAATTGTTCTGATTTGGATTGAATATTGGTATATTGTTAGGGGTTGATACAAAAATTTGATGATTGATTAAGTCAGAATTTCTTATTTATTTTGGTAACTAATCTCTTGATCAGTCCACTCTGTATAAATATTGCGTGGCATTA
CDS Sequence
- >AT3G19580.2
ATGGCCCTCGAAGCGATGAACACTCCAACTTCTTCTTTCACCAGAATCGAAACGAAAGAAGATTTGATGAACGACGCCGTTTTCATTGAGCCGTGGCTTAAACGCAAACGCTCCAAACGTCAGCGTTCTCACAGCCCTTCTTCGTCTTCTTCCTCACCGCCTCGATCTCGACCCAAATCCCAGAATCAAGATCTTACGGAAGAAGAGTATCTCGCTCTTTGTCTCCTCATGCTCGCTAAAGATCAACCGTCGCAAACGCGATTTCATCAACAGTCGCAATCGTTAACGCCGCCGCCAGAATCAAAGAACCTTCCGTACAAGTGTAACGTCTGTGAAAAAGCGTTTCCTTCCTATCAGGCTTTAGGCGGTCACAAAGCAAGTCACCGAATCAAACCACCAACCGTAATCTCAACAACCGCCGATGATTCAACAGCTCCGACCATCTCCATCGTCGCCGGAGAAAAACATCCGATTGCTGCCTCCGGAAAGATCCACGAGTGTTCAATCTGTCATAAAGTGTTTCCGACGGGTCAAGCTTTAGGCGGTCACAAACGTTGTCACTACGAAGGCAACCTCGGCGGCGGAGGAGGAGGAGGAAGCAAATCAATCAGTCACAGTGGAAGCGTGTCGAGCACGGTATCGGAAGAAAGGAGCCACCGTGGATTCATCGATCTAAACCTACCGGCGTTACCTGAACTCAGCCTTCATCACAATCCAATCGTCGACGAAGAGATCTTGAGTCCGTTGACCGGTAAAAAACCGCTTTTGTTGACCGATCACGACCAAGTCATCAAGAAAGAAGATTTATCTTTAAAAATCTAA - >AT3G19580.1
ATGGCCCTCGAAGCGATGAACACTCCAACTTCTTCTTTCACCAGAATCGAAACGAAAGAAGATTTGATGAACGACGCCGTTTTCATTGAGCCGTGGCTTAAACGCAAACGCTCCAAACGTCAGCGTTCTCACAGCCCTTCTTCGTCTTCTTCCTCACCGCCTCGATCTCGACCCAAATCCCAGAATCAAGATCTTACGGAAGAAGAGTATCTCGCTCTTTGTCTCCTCATGCTCGCTAAAGATCAACCGTCGCAAACGCGATTTCATCAACAGTCGCAATCGTTAACGCCGCCGCCAGAATCAAAGAACCTTCCGTACAAGTGTAACGTCTGTGAAAAAGCGTTTCCTTCCTATCAGGCTTTAGGCGGTCACAAAGCAAGTCACCGAATCAAACCACCAACCGTAATCTCAACAACCGCCGATGATTCAACAGCTCCGACCATCTCCATCGTCGCCGGAGAAAAACATCCGATTGCTGCCTCCGGAAAGATCCACGAGTGTTCAATCTGTCATAAAGTGTTTCCGACGGGTCAAGCTTTAGGCGGTCACAAACGTTGTCACTACGAAGGCAACCTCGGCGGCGGAGGAGGAGGAGGAAGCAAATCAATCAGTCACAGTGGAAGCGTGTCGAGCACGGTATCGGAAGAAAGGAGCCACCGTGGATTCATCGATCTAAACCTACCGGCGTTACCTGAACTCAGCCTTCATCACAATCCAATCGTCGACGAAGAGATCTTGAGTCCGTTGACCGGTAAAAAACCGCTTTTGTTGACCGATCACGACCAAGTCATCAAGAAAGAAGATTTATCTTTAAAAATCTAA
Protein Sequence
- >AT3G19580.2
MALEAMNTPTSSFTRIETKEDLMNDAVFIEPWLKRKRSKRQRSHSPSSSSSSPPRSRPKSQNQDLTEEEYLALCLLMLAKDQPSQTRFHQQSQSLTPPPESKNLPYKCNVCEKAFPSYQALGGHKASHRIKPPTVISTTADDSTAPTISIVAGEKHPIAASGKIHECSICHKVFPTGQALGGHKRCHYEGNLGGGGGGGSKSISHSGSVSSTVSEERSHRGFIDLNLPALPELSLHHNPIVDEEILSPLTGKKPLLLTDHDQVIKKEDLSLKI - >AT3G19580.1
MALEAMNTPTSSFTRIETKEDLMNDAVFIEPWLKRKRSKRQRSHSPSSSSSSPPRSRPKSQNQDLTEEEYLALCLLMLAKDQPSQTRFHQQSQSLTPPPESKNLPYKCNVCEKAFPSYQALGGHKASHRIKPPTVISTTADDSTAPTISIVAGEKHPIAASGKIHECSICHKVFPTGQALGGHKRCHYEGNLGGGGGGGSKSISHSGSVSSTVSEERSHRGFIDLNLPALPELSLHHNPIVDEEILSPLTGKKPLLLTDHDQVIKKEDLSLKI