Information report for AT3G19480
Gene Details
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Functional Descriptions
- GO:0009570 — located in — chloroplast stroma
- GO:0004617 — enables — phosphoglycerate dehydrogenase activity
- GO:0009507 — located in — chloroplast
- GO:0006564 — involved in — L-serine biosynthetic process
- GO:0051287 — enables — NAD binding
- GO:0009570 — is active in — chloroplast stroma
- GO:0003954 — enables — NADH dehydrogenase activity
- GO:0005739 — located in — mitochondrion
- GO:0009643 — acts upstream of or within — photosynthetic acclimation
- CS72462 — elevated transient nonphotochemical quenching (NPQ) under nonsaturating light conditions, photosystem II damage under long-term fluctuating light stress; higher cellular ATP content; decreased chloroplast amino acid level
- CS72463 — elevated transient nonphotochemical quenching (NPQ) under nonsaturating light conditions, photosystem II damage under long-term fluctuating light stress; higher cellular ATP content
- CS72464 — elevated transient nonphotochemical quenching (NPQ) under nonsaturating light conditions, photosystem II damage and decreased biomass under long-term fluctuating light stress; reduced sodium tolerance
- SALK_008491 — Transient high NPQ in SALK_008491 is caused by loss of PGDH3.
Functional Keywords
Literature and News
- Inactivation of the chloroplast ATP synthase gamma subunit results in high non-photochemical fluorescence quenching and altered nuclear gene expression in Arabidopsis thaliana. DOI: 10.1074/jbc.M308435200 ; PMID: 14576160
- Experimental analysis of the Arabidopsis mitochondrial proteome highlights signaling and regulatory components, provides assessment of targeting prediction programs, and indicates plant-specific mitochondrial proteins. DOI: 10.1105/tpc.016055 ; PMID: 14671022
- Genome-wide analysis of Arabidopsis responsive transcriptome to nitrogen limitation and its regulation by the ubiquitin ligase gene NLA. DOI: 10.1007/s11103-007-9241-0 ; PMID: 17885809
- Global analysis of Arabidopsis gene expression uncovers a complex array of changes impacting pathogen response and cell cycle during geminivirus infection. DOI: 10.1104/pp.108.121038 ; PMID: 18650403
- Functional characterization of the plastidial 3-phosphoglycerate dehydrogenase family in Arabidopsis. DOI: 10.1104/pp.113.226720 ; PMID: 24058165
- Arabidopsis phosphoglycerate dehydrogenase1 of the phosphoserine pathway is essential for development and required for ammonium assimilation and tryptophan biosynthesis. DOI: 10.1105/tpc.113.118992 ; PMID: 24368794
- PGDH family genes differentially affect Arabidopsis tolerance to salt stress. DOI: 10.1016/j.plantsci.2019.110284 ; PMID: 31779918
- Phosphoglycerate dehydrogenase genes differentially affect Arabidopsis metabolism and development. DOI: 10.1016/j.plantsci.2021.110863 ; PMID: 33775368
- Regulation of serine biosynthesis in Arabidopsis. Crucial role of plastidic 3-phosphoglycerate dehydrogenase in non-photosynthetic tissues. DOI: 10.1074/jbc.274.1.397 ; PMID: 9867856
- Experimental analysis of the Arabidopsis mitochondrial proteome highlights signaling and regulatory components, provides assessment of targeting prediction programs, and indicates plant-specific mitochondrial proteins. DOI: 10.1105/tpc.016055 ; PMID: 14671022
- Sorting signals, N-terminal modifications and abundance of the chloroplast proteome. DOI: 10.1371/journal.pone.0001994 ; PMID: 18431481
Gene Resources
- UniProt: A0A5S9XE93
- EMBL: CACRSJ010000106, CACSHJ010000089
- AlphaFoldDB: A0A5S9XE93
- EnsemblPlants: AT3G19480.1
- Gramene: AT3G19480.1
- KEGG: ath:AT3G19480
- Orthologous matrix: ATSKMMN
- ExpressionAtlas: AT3G19480
- InterPro: IPR002912, IPR006139, IPR006140
- PANTHER: PTHR42938, PTHR42938:SF5
- SUPFAM: SSF143548, SSF51735, SSF52283
- PROSITE: PS00065, PS00670, PS00671
- Gene3D: 3.30.1330.90, 3.30.70.260, 3.40.50.720
- OrthoDB: A0A5S9XE93
- SWISS-MODEL: A0A5S9XE93
- Conserved Domain Database: cd04902, cd12173
Homologs
- Brassica napus GSBRNA2T00090396001
Sequences
cDNA Sequence
- >AT3G19480.1
TTCAAAATCCACTTAAGAAGTGAAGATATAAGTGAACAAAGGATGTAGCGTAATCTAGCACAACATATTTAAACCTCACAAAACCCACCCGAAAGATGAACCCATATCTCTCTACTCTGTTGCTGACGATACATACACCTTTACTTACATTATATTCCCGCCATCGCGATGGCGACGTCTCTGAATCTATCATCGATCTTCTCCTCCTCCTCAAGGCTCGTCACCACTCCCTCCTCTGTTTTTCCCATCCGTCAGAGGCGACGGATCATCCTCGTTACGTCTTCTTCTTCCGGAGGTGGAGGAAAACCGACGATTCTCGTAACGGAGAAGCTAGGCCAAGCGGGGATCGATCTGCTTAAGAAGTACGCTAATGTGGATTGCTCTTATGATCTGAGTCTCGAGGAGCTTTGTACGAAGATCTCTCTTTGTGATGCGCTCATCGTCAGGAGTGGTACCAAGGTTGGGAGAGATGTGTTTGAATCGTCGCGTGGGAGGCTTAAGGTTGTTGGACGCGCTGGTGTTGGGATTGATAACGTCGATTTGGCGGCGGCGACTGAGTATGGGTGTTTGGTTGTTAATGCTCCGACTGCGAACACTGTGGCTGCTGCTGAACACGGAATTGCGCTTTTGACCGCCATGGCTAGAAACATTGCTCAAGCTGATGCTTCTATCAAAGCTGGCAAATGGACGAGAAACAAGTATGTAGGTGTTTCACTTGTGGGGAAGACTCTTGCTGTTCTTGGTTTTGGTAAAGTTGGATCAGAGGTTGCTAGACGAGCCAGGGGACTTGGTATGCATGTCATTACACATGATCCTTATGCACCAGCGGATCGTGCACGAGCTATTGGTGTGGAGCTTGTTAGTTTTGAAGTAGCTATTTCAACTGCTGACTTCATCTCTTTGCATCTGCCTCTTACTGCTGCTACTTCGAAGATGATGAATGATGTGACCTTTGCGATGATGAAGAAAGGAGTCCGTATTGTTAATGTTGCTCGTGGTGGAGTTATTGATGAGGAAGCTCTTTTGAGAGCGCTTGACTCGGGTATTGTTGCTCAGGCAGCTCTTGATGTTTTTACAGTAGAGCCACCTGTTAAAGATAATAAGTTGGTGTTACATGAGAGTGTCACTGCCACACCTCATCTTGGTGCTAGTACTATGGAGGCTCAGGAAGGAGTGTCTATCGAAGTCGCAGAAGCTGTTATTGGAGCTTTGAGAGGAGAACTTGCTGCTACCGCGGTCAATGCACCAATGGTTCCACTAGAGGTATTGAGGGAGCTGAAGCCGTATGTTGTACTTGCTGAGAAGCTTGGGAGGCTGGCTGTACAATTGGTAACTGGTGGAAGCGGTGTGAATGCTGTGAAAGTGACTTATGCTTCTTCCAGAGCTCCTGATGATCTCGACACTAGACTTCTCCGAGCCATGGTCATAAAGGGGATCATCGAACCCATTTCCAGCGTATTCATAAATCTGGTTAACTCCGATTATATTGCCAAACAACGTGGAGTCAAAATCTCAGAAGAACGTATGGTTCTAGACGGCTCACCTGAGAATCCAATTGAATACATAACTGTTCGGATAGCAAACGTGGAATCAAGATTTGCCAGCGCTTTATCAGAGTCCGGTGAGATCAAAGTAGAAGGCAGAGTGAAACAAGGGGTTCCAAGTCTTACCAAAGTCGGATTATTTGGAGTGGATGTGAGTTTAGAAGGGAGTGTGATTCTGTGCAGGCAAGTAGATCAGCCTGGGATGATCGGTAAAGTTGCTAGCATCTTAGGAGATGAAAACGTCAACGTGAGCTTCATGAGCGTCGGTCGAATCGCTCCAGGCAAGCAAGCTGTGATGGCAATTGGAGTAGATGAACAACCAAGCAAAGAAACTTTGAAGAAAATCGGAGACATTCCTGCCATTGAAGAGTTTGTTTTCCTCAAACTATAGGTTAATACTTTACATGGATGCACATAAGAAAAAACTCAGAGATCGATATAATCTTAAATGATGATTTATTCTGTACTAATGATACAATCGAGTGTACATGAAACAAATTACATAGTTGATTTTTTCCAAAGCGGC
CDS Sequence
- >AT3G19480.1
ATGGCGACGTCTCTGAATCTATCATCGATCTTCTCCTCCTCCTCAAGGCTCGTCACCACTCCCTCCTCTGTTTTTCCCATCCGTCAGAGGCGACGGATCATCCTCGTTACGTCTTCTTCTTCCGGAGGTGGAGGAAAACCGACGATTCTCGTAACGGAGAAGCTAGGCCAAGCGGGGATCGATCTGCTTAAGAAGTACGCTAATGTGGATTGCTCTTATGATCTGAGTCTCGAGGAGCTTTGTACGAAGATCTCTCTTTGTGATGCGCTCATCGTCAGGAGTGGTACCAAGGTTGGGAGAGATGTGTTTGAATCGTCGCGTGGGAGGCTTAAGGTTGTTGGACGCGCTGGTGTTGGGATTGATAACGTCGATTTGGCGGCGGCGACTGAGTATGGGTGTTTGGTTGTTAATGCTCCGACTGCGAACACTGTGGCTGCTGCTGAACACGGAATTGCGCTTTTGACCGCCATGGCTAGAAACATTGCTCAAGCTGATGCTTCTATCAAAGCTGGCAAATGGACGAGAAACAAGTATGTAGGTGTTTCACTTGTGGGGAAGACTCTTGCTGTTCTTGGTTTTGGTAAAGTTGGATCAGAGGTTGCTAGACGAGCCAGGGGACTTGGTATGCATGTCATTACACATGATCCTTATGCACCAGCGGATCGTGCACGAGCTATTGGTGTGGAGCTTGTTAGTTTTGAAGTAGCTATTTCAACTGCTGACTTCATCTCTTTGCATCTGCCTCTTACTGCTGCTACTTCGAAGATGATGAATGATGTGACCTTTGCGATGATGAAGAAAGGAGTCCGTATTGTTAATGTTGCTCGTGGTGGAGTTATTGATGAGGAAGCTCTTTTGAGAGCGCTTGACTCGGGTATTGTTGCTCAGGCAGCTCTTGATGTTTTTACAGTAGAGCCACCTGTTAAAGATAATAAGTTGGTGTTACATGAGAGTGTCACTGCCACACCTCATCTTGGTGCTAGTACTATGGAGGCTCAGGAAGGAGTGTCTATCGAAGTCGCAGAAGCTGTTATTGGAGCTTTGAGAGGAGAACTTGCTGCTACCGCGGTCAATGCACCAATGGTTCCACTAGAGGTATTGAGGGAGCTGAAGCCGTATGTTGTACTTGCTGAGAAGCTTGGGAGGCTGGCTGTACAATTGGTAACTGGTGGAAGCGGTGTGAATGCTGTGAAAGTGACTTATGCTTCTTCCAGAGCTCCTGATGATCTCGACACTAGACTTCTCCGAGCCATGGTCATAAAGGGGATCATCGAACCCATTTCCAGCGTATTCATAAATCTGGTTAACTCCGATTATATTGCCAAACAACGTGGAGTCAAAATCTCAGAAGAACGTATGGTTCTAGACGGCTCACCTGAGAATCCAATTGAATACATAACTGTTCGGATAGCAAACGTGGAATCAAGATTTGCCAGCGCTTTATCAGAGTCCGGTGAGATCAAAGTAGAAGGCAGAGTGAAACAAGGGGTTCCAAGTCTTACCAAAGTCGGATTATTTGGAGTGGATGTGAGTTTAGAAGGGAGTGTGATTCTGTGCAGGCAAGTAGATCAGCCTGGGATGATCGGTAAAGTTGCTAGCATCTTAGGAGATGAAAACGTCAACGTGAGCTTCATGAGCGTCGGTCGAATCGCTCCAGGCAAGCAAGCTGTGATGGCAATTGGAGTAGATGAACAACCAAGCAAAGAAACTTTGAAGAAAATCGGAGACATTCCTGCCATTGAAGAGTTTGTTTTCCTCAAACTATAG
Protein Sequence
- >AT3G19480.1
MATSLNLSSIFSSSSRLVTTPSSVFPIRQRRRIILVTSSSSGGGGKPTILVTEKLGQAGIDLLKKYANVDCSYDLSLEELCTKISLCDALIVRSGTKVGRDVFESSRGRLKVVGRAGVGIDNVDLAAATEYGCLVVNAPTANTVAAAEHGIALLTAMARNIAQADASIKAGKWTRNKYVGVSLVGKTLAVLGFGKVGSEVARRARGLGMHVITHDPYAPADRARAIGVELVSFEVAISTADFISLHLPLTAATSKMMNDVTFAMMKKGVRIVNVARGGVIDEEALLRALDSGIVAQAALDVFTVEPPVKDNKLVLHESVTATPHLGASTMEAQEGVSIEVAEAVIGALRGELAATAVNAPMVPLEVLRELKPYVVLAEKLGRLAVQLVTGGSGVNAVKVTYASSRAPDDLDTRLLRAMVIKGIIEPISSVFINLVNSDYIAKQRGVKISEERMVLDGSPENPIEYITVRIANVESRFASALSESGEIKVEGRVKQGVPSLTKVGLFGVDVSLEGSVILCRQVDQPGMIGKVASILGDENVNVSFMSVGRIAPGKQAVMAIGVDEQPSKETLKKIGDIPAIEEFVFLKL