Gene Details:
- Gene ID: AT3G19380
- Gene Symbol: PUB25
- Gene Name: plant U-box 25
- Description: plant U-box 25;(source:Araport11)
- TAIR Accession: locus:2090604
- Genome: Araport11_genome_release
- Species: Arabidopsis thaliana
Transcripts:
Gene Ontology:
- GO:0098542 — acts upstream of or within — defense response to other organism
- GO:0061630 — enables — ubiquitin protein ligase activity
- GO:0005515 — enables — protein binding
Germplasm Phenotype:
- pub25-1 — Smaller lesions when inoculated with B.cinerea, and reduced bacterial population when inoculated with Pto DC3000.
Literature:
- Armadillo repeat proteins: beyond the animal kingdom. DOI: 10.1016/s0962-8924(03)00167-3 ; PMID: 12946625
- Identification of 118 Arabidopsis transcription factor and 30 ubiquitin-ligase genes responding to chitin, a plant-defense elicitor. DOI: 10.1094/MPMI-20-8-0900 ; PMID: 17722694
- Genome-wide analysis of Arabidopsis responsive transcriptome to nitrogen limitation and its regulation by the ubiquitin ligase gene NLA. DOI: 10.1007/s11103-007-9241-0 ; PMID: 17885809
- Arabidopsis PUB22 and PUB23 are homologous U-Box E3 ubiquitin ligases that play combinatory roles in response to drought stress. DOI: 10.1105/tpc.108.060699 ; PMID: 18664614
- A Regulatory Module Controlling Homeostasis of a Plant Immune Kinase. DOI: 10.1016/j.molcel.2017.12.026 ; PMID: 29358080
- PUB25 and PUB26 Promote Plant Freezing Tolerance by Degrading the Cold Signaling Negative Regulator MYB15. DOI: 10.1016/j.devcel.2019.08.008 ; PMID: 31543444
- Plant U-box E3 ligases PUB25 and PUB26 control organ growth in Arabidopsis. DOI: 10.1111/nph.16885 ; PMID: 32810874
- News from the PUB: plant U-box type E3 ubiquitin ligases. DOI: 10.1093/jxb/erx411 ; PMID: 29237060
- Verticillium dahliae effector VDAL protects MYB6 from degradation by interacting with PUB25 and PUB26 E3 ligases to enhance Verticillium wilt resistance. DOI: 10.1093/plcell/koab221 ; PMID: 34469582
- An antisense intragenic lncRNA SEAIRa mediates transcriptional and epigenetic repression of SERRATE in Arabidopsis. DOI: 10.1073/pnas.2216062120 ; PMID: 36857348
- PUB25 and PUB26 dynamically modulate ICE1 stability via differential ubiquitination during cold stress in Arabidopsis. DOI: 10.1093/plcell/koad159 ; PMID: 37279565
- Identification of 118 Arabidopsis transcription factor and 30 ubiquitin-ligase genes responding to chitin, a plant-defense elicitor. DOI: 10.1094/MPMI-20-8-0900 ; PMID: 17722694
Sequences:
cDNA Sequence
- >AT3G19380.1
AAAAATTATCATAAAGAGATGTATAATTGTATATCATTCATATAAATCTTAAGCTTCACTTCAAAGATGCGACTTTCTCCCACAAAACATATTTACGTATATATCATCTCATGATGTTCACTTGATTAAAAATTAACATCACGAATTTAACAGAATATATTATTAAATAATCCAGCAGGTAACAAAGTTATAAATGGCACACGTGTGGGCTCATACCCAGATAAGCTCTCGTTCCTCATACTCTTAACGCTCACAACAAACAATCTCACCTTTCTTCTTCTTCTTCTTCTCTCTGTTTCTCAAGTTTCTTAATGCCTAGGAATATAGAACCATTGGATCTTGGAATCCAAATACCATATCATTTCAGATGTCCAATATCACTCGAACTTATGCAAGACCCAGTCACCGTCTGCACCGGCCAAACCTACGACCGAGCCAGCATCGAGTCATGGGTCTCCATCGGTAACAACACGACATGTCCAGTCACACGAGCTCCTCTCTCCGACTTCACACTCATCCCTAACCACACTCTCCGTCGTCTCATCCAAGAATGGTGCGTCGCTAACCGCTCCAATGGAGTCGAACGTATCCCTACTCCTAAACAACCAGCTGATCCAACCTCTGTTCGTGCTCTTCTCAGTCAAGCCTCTGCTATAACAGGAACCCACGTCTCTGTTCGTTCACGCGCCGCCGCTCTCCGCCGTTTACGTGGTTTCGCTCGTGATTCTGATAAAAATCGCGTTTTGATCGCAGCTCATAACGCTACAGAGATTTTGATTAAGATTCTGTTCTCTGAAACGACGTCGTCGGAGTTAGTCTCTGAGTCTTTAGCTCTACTTGTTATGTTACCGATAACGGAGCCGAACCAGTTTGTTTCGATATCGTCGGATCCGGGTCGGGTCGAGTTTTTGACCCGGTTGTTATTCGATTCGTCGATTGAAACACGCGTTAACGCCGCCGCGTTGATCGAGATTGTTTCGACGGGAACCAAATCGGCGGACCTGAAAGGTTCGATTTCGAATTCAGAATCTGTATTCGAAGGAGTTCTCGATCTTCTGAGAAATCCGATTTCGTCACGACGAGCTCTCAAAATCGGAATCAAAACTCTGTTCGCGCTCTGTTCAGTGAAATCGACGCGACACATCGCGATCACAGCCGGTGCGCCGGAGATTCTAATAGACAGACTCGCGGCGGATTTCGATAGATGCGATACGGAGCGAGCCTTAGCGACGGTGGAGCTACTCTGCCGAACGCCGGAAGGATGCGCGGCGTTCGGTGAGCACGCTTTAACGGTGCCGTTGTTAGTTAAAACGATATTGAGAGTTTCGGATCGCGCGACGGAGTATGCGGCGGGGGCGTTGTTAGCGCTTTGTACGGCGGAGGAAAGGTGGAGGGAGGAAGCGGCGGGGGCGGGAGTGGTGGTACAGTTGTTGTTGATGGTGCAGAGTGAGTGTACGGAGAGAGCGAAGAAGAAAGCACAGAAGTTATTGAAGCTTCTGAGAGATTCATGGCCTGACTACAATTCCTTCGCTAACTCCGATGACTTTGGTTGCAGCAGCCAAGTGGTCCCTTTTTGATTTCTCGATTTTTTTTTTTCAAAACATTGTTTTTTCACAGTAATTATTAAAAAAATGTTTTTTTTTTAATTAGAAGGAAAAATAATGGTCATTTTTTGTGTGTATTTGATGGAAAGATGTGAAGAAGAAAAGATAATATACAGAAGCTTTTTGATGACCATGAATTAGTTTTTTTTTTTTTCAGTATGTATGTAAAGTAATTATTTTGTTATTTGATTGGCCTTTTGAGTTGGGAAAAGTTGTTAAAGAAGCAAATGGAAGATATGCTTAAAGGCTTTTTAAAGTTTAAAGTCTAAAGGTAAGTCAACTTTTTTCTGCATTTTTACAGGTAAATTTTGGTATCGACATGTTGGCAAATTTGGTATCGACATGTAAGCTTCTAGTGAACGTCATTATGGTAGTTTGTACTTTGTGTTGTAGAGCTCTTGTTAATTTATCTTCTTTTAAGTGTCTCCTTTTTCTATTTTTT
CDS Sequence
- >AT3G19380.1
ATGCCTAGGAATATAGAACCATTGGATCTTGGAATCCAAATACCATATCATTTCAGATGTCCAATATCACTCGAACTTATGCAAGACCCAGTCACCGTCTGCACCGGCCAAACCTACGACCGAGCCAGCATCGAGTCATGGGTCTCCATCGGTAACAACACGACATGTCCAGTCACACGAGCTCCTCTCTCCGACTTCACACTCATCCCTAACCACACTCTCCGTCGTCTCATCCAAGAATGGTGCGTCGCTAACCGCTCCAATGGAGTCGAACGTATCCCTACTCCTAAACAACCAGCTGATCCAACCTCTGTTCGTGCTCTTCTCAGTCAAGCCTCTGCTATAACAGGAACCCACGTCTCTGTTCGTTCACGCGCCGCCGCTCTCCGCCGTTTACGTGGTTTCGCTCGTGATTCTGATAAAAATCGCGTTTTGATCGCAGCTCATAACGCTACAGAGATTTTGATTAAGATTCTGTTCTCTGAAACGACGTCGTCGGAGTTAGTCTCTGAGTCTTTAGCTCTACTTGTTATGTTACCGATAACGGAGCCGAACCAGTTTGTTTCGATATCGTCGGATCCGGGTCGGGTCGAGTTTTTGACCCGGTTGTTATTCGATTCGTCGATTGAAACACGCGTTAACGCCGCCGCGTTGATCGAGATTGTTTCGACGGGAACCAAATCGGCGGACCTGAAAGGTTCGATTTCGAATTCAGAATCTGTATTCGAAGGAGTTCTCGATCTTCTGAGAAATCCGATTTCGTCACGACGAGCTCTCAAAATCGGAATCAAAACTCTGTTCGCGCTCTGTTCAGTGAAATCGACGCGACACATCGCGATCACAGCCGGTGCGCCGGAGATTCTAATAGACAGACTCGCGGCGGATTTCGATAGATGCGATACGGAGCGAGCCTTAGCGACGGTGGAGCTACTCTGCCGAACGCCGGAAGGATGCGCGGCGTTCGGTGAGCACGCTTTAACGGTGCCGTTGTTAGTTAAAACGATATTGAGAGTTTCGGATCGCGCGACGGAGTATGCGGCGGGGGCGTTGTTAGCGCTTTGTACGGCGGAGGAAAGGTGGAGGGAGGAAGCGGCGGGGGCGGGAGTGGTGGTACAGTTGTTGTTGATGGTGCAGAGTGAGTGTACGGAGAGAGCGAAGAAGAAAGCACAGAAGTTATTGAAGCTTCTGAGAGATTCATGGCCTGACTACAATTCCTTCGCTAACTCCGATGACTTTGGTTGCAGCAGCCAAGTGGTCCCTTTTTGA
Protein Sequence
- >AT3G19380.1
MPRNIEPLDLGIQIPYHFRCPISLELMQDPVTVCTGQTYDRASIESWVSIGNNTTCPVTRAPLSDFTLIPNHTLRRLIQEWCVANRSNGVERIPTPKQPADPTSVRALLSQASAITGTHVSVRSRAAALRRLRGFARDSDKNRVLIAAHNATEILIKILFSETTSSELVSESLALLVMLPITEPNQFVSISSDPGRVEFLTRLLFDSSIETRVNAAALIEIVSTGTKSADLKGSISNSESVFEGVLDLLRNPISSRRALKIGIKTLFALCSVKSTRHIAITAGAPEILIDRLAADFDRCDTERALATVELLCRTPEGCAAFGEHALTVPLLVKTILRVSDRATEYAAGALLALCTAEERWREEAAGAGVVVQLLLMVQSECTERAKKKAQKLLKLLRDSWPDYNSFANSDDFGCSSQVVPF