Information report for AT3G19260
Gene Details
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Functional Descriptions
- PO:0000084 — plant sperm cell — célula espermática o esperma (Spanish, exact), male gamete (exact), microgamete (exact), 植物精子細胞 (Japanese, exact), sperm nucleus (related), sperm cell (broad)
- PO:0025195 — pollen tube cell — célula del tubo polínico (Spanish, exact), 花粉管細胞 (Japanese, exact)
- PO:0025281 — pollen — polen (Spanish, exact), pollen grain (exact), 花粉 (Japanese, exact)
- GO:0006665 — involved in — sphingolipid metabolic process
- GO:0046513 — involved in — ceramide biosynthetic process
- GO:0002238 — acts upstream of or within — response to molecule of fungal origin
- GO:0050291 — enables — sphingosine N-acyltransferase activity
- GO:0042759 — acts upstream of or within — long-chain fatty acid biosynthetic process
- GO:0005783 — located in — endoplasmic reticulum
- GO:0005886 — located in — plasma membrane
- GO:0010256 — involved in — endomembrane system organization
- GO:0005783 — is active in — endoplasmic reticulum
- GO:0005634 — located in — nucleus
- GO:0005794 — located in — Golgi apparatus
- CS66114 — Hypersensitive to Fumonisin B1
Functional Keywords
Literature and News
- A post-genomic approach to understanding sphingolipid metabolism in Arabidopsis thaliana. DOI: 10.1093/aob/mch071 ; PMID: 15037448
- Mining the Arabidopsis thaliana genome for highly-divergent seven transmembrane receptors. DOI: 10.1186/gb-2006-7-10-r96 ; PMID: 17064408
- Global analysis of Arabidopsis gene expression uncovers a complex array of changes impacting pathogen response and cell cycle during geminivirus infection. DOI: 10.1104/pp.108.121038 ; PMID: 18650403
- Systematic analysis of protein subcellular localization and interaction using high-throughput transient transformation of Arabidopsis seedlings. DOI: 10.1111/j.1365-313X.2008.03596.x ; PMID: 18643979
- Arabidopsis AAL-toxin-resistant mutant atr1 shows enhanced tolerance to programmed cell death induced by reactive oxygen species. DOI: 10.1016/j.bbrc.2008.08.056 ; PMID: 18725200
- Transcriptome analyses show changes in gene expression to accompany pollen germination and tube growth in Arabidopsis. DOI: 10.1104/pp.108.126375 ; PMID: 18775970
- Sphingolipids containing very-long-chain fatty acids define a secretory pathway for specific polar plasma membrane protein targeting in Arabidopsis. DOI: 10.1105/tpc.110.080473 ; PMID: 21666002
- Disruption of the ceramide synthase LOH1 causes spontaneous cell death in Arabidopsis thaliana. DOI: 10.1111/j.1469-8137.2011.03852.x ; PMID: 21883234
- Oxidative stress provokes distinct transcriptional responses in the stress-tolerant atr7 and stress-sensitive loh2 Arabidopsis thaliana mutants as revealed by multi-parallel quantitative real-time PCR analysis of ROS marker and antioxidant genes. DOI: 10.1016/j.plaphy.2012.05.024 ; PMID: 22710144
- Acyl-lipid metabolism. DOI: 10.1199/tab.0161 ; PMID: 23505340
- Unsaturation of very-long-chain ceramides protects plant from hypoxia-induced damages by modulating ethylene signaling in Arabidopsis. DOI: 10.1371/journal.pgen.1005143 ; PMID: 25822663
- Sphingolipid metabolism is strikingly different between pollen and leaf in Arabidopsis as revealed by compositional and gene expression profiling. DOI: 10.1016/j.phytochem.2015.02.019 ; PMID: 25794895
- Overexpression of Arabidopsis Ceramide Synthases Differentially Affects Growth, Sphingolipid Metabolism, Programmed Cell Death, and Mycotoxin Resistance. DOI: 10.1104/pp.15.00987 ; PMID: 26276842
- Sphingolipid-Induced Programmed Cell Death is a Salicylic Acid and EDS1-Dependent Phenotype in Arabidopsis Fatty Acid Hydroxylase (Fah1, Fah2) and Ceramide Synthase (Loh2) Triple Mutants. DOI: 10.1093/pcp/pcab174 ; PMID: 34910213
- The Two Classes of Ceramide Synthases Play Different Roles in Plant Immunity and Cell Death. DOI: 10.3389/fpls.2022.824585 ; PMID: 35463421
- Overexpression of a ceramide synthase gene,GhCS1, inhibits fiber cell initiation and elongation by promoting the synthesis of ceramides containing dihydroxy LCB and VLCFA. DOI: 10.3389/fpls.2022.1000348 ; PMID: 36119591
- Large-scale analysis of in vivo phosphorylated membrane proteins by immobilized metal ion affinity chromatography and mass spectrometry. DOI: 10.1074/mcp.T300006-MCP200 ; PMID: 14506206
- Systematic analysis of protein subcellular localization and interaction using high-throughput transient transformation of Arabidopsis seedlings. DOI: 10.1111/j.1365-313X.2008.03596.x ; PMID: 18643979
- Arabidopsis AAL-toxin-resistant mutant atr1 shows enhanced tolerance to programmed cell death induced by reactive oxygen species. DOI: 10.1016/j.bbrc.2008.08.056 ; PMID: 18725200
Gene Resources
- UniProt: A0A178VL39
- EMBL: LUHQ01000003
- AlphaFoldDB: A0A178VL39
- EnsemblPlants: AT3G19260.1
- Gramene: AT3G19260.1
- KEGG: ath:AT3G19260
- Orthologous matrix: IATWHFQ
- ExpressionAtlas: AT3G19260
- InterPro: IPR006634, IPR016439
- PANTHER: PTHR12560, PTHR12560:SF0
- PROSITE: PS50922
- SWISS-MODEL: A0A178VL39
Homologs
- Gossypium hirsutum Gh_D13G0393, Gh_D12G0217, Gh_A13G0350
- Solanum lycopersicum Asc-1
Sequences
cDNA Sequence
- >AT3G19260.1
AAAAAAGAAGAAAGAGAGAGACTTCTTCATATACACTGTATTTTTAAAAAATAATAAATAATTAATACTAGTAATTATGAGGAGTTGTTCTTTGTTGTCGATACGAAACTAAAATACATAATAAACAATCAAAAAGAGAAAAAAAGAAAGAAGGTCTGTGAGATCCCAATTACAATTTCGCAAGGCTTTTTGCAATTTCCATCTGTCGCTCACCGGAGGAATTAGAACGTGCTCCGAATCTCTTCTCTTCCCCAAATAGATTCCGATCGATTACGCAACCAAATTCTCGGCGTTTGAATTTTTTTTTCCGGAGAACAGGTGGTTTCTTCTTCTCCAGGAAGATTTTTGATTCTTCTGTCGGATGATTTCTCAGTGAAAATCATGGAATCGGTATCATCACGCGGCGGAGACCCCGTCGTAAAACCGTCGATGGAGGTCTGGCATTTCCAGATTGCTGTCTATTTCGCTTTCGGATTCTTCTTCTTGAGGCTTGTCCTCGATAGATACGTCTTTCAAAGGATAGCTCTTTGGCTTTTGAGTACTGGTTCTGCTCCGATTAAATTGAATGATGCTGCTACTCGGGCAAAAATCGTCAAATGCAAAGAGTCCTTGTGGAAATTGTTGTATTATGCTGCTTGTGACTTTTTCGTTCTACAAGTCATTTATCACGAGCCGTGGGCTAGAGATATCAAACTCTACTTCCACGGTTGGCCTAATCAAGAGTTGAAGCTTTCAATAAAGCTTTACTATATGTGCCAGTGCGGTTTTTATGTGTATGGTGTGGCTGCGTTGCTTGCATGGGAGACAAGAAGAAAGGATTTTGCTGTCATGATGTCTCACCATGTAATTACAATCATCCTGCTTAGCTACTCCTACTTAACCAGTTTTTTCCGGATTGGAGCAATCATCCTAGCCCTTCATGATGCAAGTGATGTCTTTATGGAAACTGCTAAAATTTTCAAGTACTCTGAAAAAGAATTTGGAGCAAGTGTATGTTTTGCATTATTTGCTGTCTCCTGGCTATTGCTACGGTTGATATACTTCCCATTTTGGATCATCAGGGCCACGAGCATTGAACTCCTGGATTATTTGGATATGACATCAGCTGAAGGCACATTGATGTACTATTCTTTCAACACTATGTTACTAATGCTGCTTGTTTTCCACATATATTGGTGGTATCTCATTTGTGCCATGATTGTAAGACTACTTAAAAACAGAGGAAAAGTTGGAGAAGACATAAGATCCGATTCAGAGGATGATGATGATTAGTCTTGTAAGATACGGAACATGTTTCCACTTCTCCAACCAAACCATTTAGCTGCTGAAGAATTTGTTTTCAGCTTCATTACCTTACTGACTAGCGTTGGAGGTAAACAAAAAAAAGAAGAAAAGGTTATAGATTTTTTTTCAGTTTTGTATTGGTCTGAGTCCATTTCGACATTAGACTGCATATTCTCTTTGACATATAAGAAAAAAAAAACAGAAACTCTGGGTTTCTTGTGTTGTTCGGTGATGTATAAAACAATATTGGAAGTCTCTCTGTAAATGCAATTCCTCATTGTATGGTTTTCAACACCATAGCCTTTTGTTATGGAGCTCACTCTTGAAAATTTTATCTGTTCAGTGGTTGCTTATATTCATTAGTTTTATTT
CDS Sequence
- >AT3G19260.1
ATGGAATCGGTATCATCACGCGGCGGAGACCCCGTCGTAAAACCGTCGATGGAGGTCTGGCATTTCCAGATTGCTGTCTATTTCGCTTTCGGATTCTTCTTCTTGAGGCTTGTCCTCGATAGATACGTCTTTCAAAGGATAGCTCTTTGGCTTTTGAGTACTGGTTCTGCTCCGATTAAATTGAATGATGCTGCTACTCGGGCAAAAATCGTCAAATGCAAAGAGTCCTTGTGGAAATTGTTGTATTATGCTGCTTGTGACTTTTTCGTTCTACAAGTCATTTATCACGAGCCGTGGGCTAGAGATATCAAACTCTACTTCCACGGTTGGCCTAATCAAGAGTTGAAGCTTTCAATAAAGCTTTACTATATGTGCCAGTGCGGTTTTTATGTGTATGGTGTGGCTGCGTTGCTTGCATGGGAGACAAGAAGAAAGGATTTTGCTGTCATGATGTCTCACCATGTAATTACAATCATCCTGCTTAGCTACTCCTACTTAACCAGTTTTTTCCGGATTGGAGCAATCATCCTAGCCCTTCATGATGCAAGTGATGTCTTTATGGAAACTGCTAAAATTTTCAAGTACTCTGAAAAAGAATTTGGAGCAAGTGTATGTTTTGCATTATTTGCTGTCTCCTGGCTATTGCTACGGTTGATATACTTCCCATTTTGGATCATCAGGGCCACGAGCATTGAACTCCTGGATTATTTGGATATGACATCAGCTGAAGGCACATTGATGTACTATTCTTTCAACACTATGTTACTAATGCTGCTTGTTTTCCACATATATTGGTGGTATCTCATTTGTGCCATGATTGTAAGACTACTTAAAAACAGAGGAAAAGTTGGAGAAGACATAAGATCCGATTCAGAGGATGATGATGATTAG
Protein Sequence
- >AT3G19260.1
MESVSSRGGDPVVKPSMEVWHFQIAVYFAFGFFFLRLVLDRYVFQRIALWLLSTGSAPIKLNDAATRAKIVKCKESLWKLLYYAACDFFVLQVIYHEPWARDIKLYFHGWPNQELKLSIKLYYMCQCGFYVYGVAALLAWETRRKDFAVMMSHHVITIILLSYSYLTSFFRIGAIILALHDASDVFMETAKIFKYSEKEFGASVCFALFAVSWLLLRLIYFPFWIIRATSIELLDYLDMTSAEGTLMYYSFNTMLLMLLVFHIYWWYLICAMIVRLLKNRGKVGEDIRSDSEDDDD