Gene Details:

  • Gene ID: AT3G19220
  • Gene Symbol: CYO1, SCO2
  • Gene Name: SHI-YO-U MEANS COTYLEDON IN JAPANESE, SNOWY COTYLEDON 2
  • Description: protein disulfide isomerase;(source:Araport11)
  • TAIR Accession: locus:2094093
  • Genome: Araport11_genome_release
  • Species: Arabidopsis thaliana

Transcripts:

Gene Ontology:

  • GO:0009535  — located in — chloroplast thylakoid membrane
  • GO:0003756  — enables — protein disulfide isomerase activity
  • GO:0043621  — enables — protein self-association
  • GO:0009658  — acts upstream of or within — chloroplast organization
  • GO:0005515  — enables — protein binding
  • GO:0009507  — located in — chloroplast

Germplasm Phenotype:

  • CS68145  — Pale cotyledons and green true leaves in 14 day-old seedlings; however, upon precocious germination, seedlings of sco2 and wild-type are indistinguishable. Reduced survival rate upon exposure to an extended period of etiolation compared to wild-type.
  • cyo1  — Albino cotyledons, abnormal chloroplast biogenesis. True leaves are not affected, chloroplast development during embryo biogenesis is not affected. Affected in photomorphogenesis after prolonged skotomorphogenesis (after 4 days in dark unable to undergo photomorphogenesis).
  • sco2-1  — Albino cotyledons, abnormal chloroplast biogenesis. True leaves are not affected, chloroplast development during embryo biogenesis is not affected. Affected in photomorphogenesis after prolonged skotomorphogenesis (after 4 days in dark unable to undergo photomorphogenesis).
  • sco2-2  — Albino cotyledons, abnormal chloroplast biogenesis. True leaves are not affected, chloroplast development during embryo biogenesis is not affected. Affected in photomorphogenesis after prolonged skotomorphogenesis (after 4 days in dark unable to undergo photomorphogenesis).

Literature:

Sequences:

cDNA Sequence
  • >AT3G19220.1
    GGTTGATTACTTCACCCAATTTCATGGCCGCACCTGCAAACTTCTCGTCTCAATGTTCCGATTATACCCTAATTGCTCTCTGCCTTCTCACAGACCTCTCGTTTTCCTTCCTCGTCTTCCTTCTCGCTCCCTCCGTTGCCGCGCCGCCGCTGATATTCCCCTTGGTGACGGAATCCGATTACCTCGAGAAGCGGATTCAACCTCTGACACGGCGAGGTCTCGGGATGTTTCCGTCGCCGCCGGTGGGAATGGTGAAGGTGCTAAGTGGAGGAAGAGGAGGTTGCTCTGGTCGAAAAGTGGAGAGAGTTACTTGGTAGATGATGGCGACGCGCTTCCTCTTCCTATGACTTATCCTGATACATCCCCTGTGTCGCCGGATGTGATTGACCGGAGGTTGCAATGTGATCCTGTAGTCGAGGATTGCCGGGAAGTGGTTTATGAATGGACTGGAAAGTGTAGAAGTTGCCAAGGATCTGGAACTGTCAGCTATTACAAGAAAAGGGGTAAAGAGGTTATATGCAAATGCATACCCTGCCAAGGGATAGGATATGTGCAGAAGATAACATCTCGGACGGACATTGAAGTGATGGAAGATTTGGATAATGAACCATCTTGACCTTGAATATGGCCCATTTTTGCATGTAAGCTTGGGTTCGTTATTGAAGTGTATCCGTTGCACGTACAAAACTATAACCAGAAGAGAGATAAGTGCTTCTTTGGGATGTTTGGCCCAAACAAGCTGATCGGAGGTATAGACAAAAACTACTGATTCTTGCTCAGATAATGGCTTCTTCTTTCACCAATAGTCCCCATATAGGCAATTTCTGTTTTATATGTATCAGACCTCGAGACACCACGAACTGCAGGAATTGTTTGTGTTTTTAGGCTGTTTCAGTCTGACTTATGTACATCAAGAGAAAAGATAGCTGTAACACGATCCATTTAATTATCTTTGTGTGCTTTACCTCTTGGTTCAAGTT
CDS Sequence
  • >AT3G19220.1
    ATGTTCCGATTATACCCTAATTGCTCTCTGCCTTCTCACAGACCTCTCGTTTTCCTTCCTCGTCTTCCTTCTCGCTCCCTCCGTTGCCGCGCCGCCGCTGATATTCCCCTTGGTGACGGAATCCGATTACCTCGAGAAGCGGATTCAACCTCTGACACGGCGAGGTCTCGGGATGTTTCCGTCGCCGCCGGTGGGAATGGTGAAGGTGCTAAGTGGAGGAAGAGGAGGTTGCTCTGGTCGAAAAGTGGAGAGAGTTACTTGGTAGATGATGGCGACGCGCTTCCTCTTCCTATGACTTATCCTGATACATCCCCTGTGTCGCCGGATGTGATTGACCGGAGGTTGCAATGTGATCCTGTAGTCGAGGATTGCCGGGAAGTGGTTTATGAATGGACTGGAAAGTGTAGAAGTTGCCAAGGATCTGGAACTGTCAGCTATTACAAGAAAAGGGGTAAAGAGGTTATATGCAAATGCATACCCTGCCAAGGGATAGGATATGTGCAGAAGATAACATCTCGGACGGACATTGAAGTGATGGAAGATTTGGATAATGAACCATCTTGA
Protein Sequence
  • >AT3G19220.1
    MFRLYPNCSLPSHRPLVFLPRLPSRSLRCRAAADIPLGDGIRLPREADSTSDTARSRDVSVAAGGNGEGAKWRKRRLLWSKSGESYLVDDGDALPLPMTYPDTSPVSPDVIDRRLQCDPVVEDCREVVYEWTGKCRSCQGSGTVSYYKKRGKEVICKCIPCQGIGYVQKITSRTDIEVMEDLDNEPS