Gene Details:

  • Gene ID: AT3G19090
  • Gene Symbol: AtLARP6c, LARP6c
  • Gene Name: La related protein 6c
  • Description: RNA-binding protein;(source:Araport11)
  • TAIR Accession: locus:2089508
  • Genome: Araport11_genome_release
  • Species: Arabidopsis thaliana

Transcripts:

Plant Ontology Annotations:

  • PO:0000084  — plant sperm cell — célula espermática o esperma (Spanish, exact), male gamete (exact), microgamete (exact), 植物精子細胞 (Japanese, exact), sperm nucleus (related), sperm cell (broad)
  • PO:0025195  — pollen tube cell — célula del tubo polínico (Spanish, exact), 花粉管細胞 (Japanese, exact)
  • PO:0025281  — pollen — polen (Spanish, exact), pollen grain (exact), 花粉 (Japanese, exact)

Gene Ontology:

  • GO:0006396  — involved in — RNA processing
  • GO:0010183  — acts upstream of or within — pollen tube guidance

Germplasm Phenotype:

  • larp6c-3  — Reduced transmission (74%) through male gametophyte. Mutant pollen has germination and pollen tube guidance defects.

Literature:

Sequences:

cDNA Sequence
  • >AT3G19090.1
    AGAGTGAGAAATAACCGAGAAGAACAAATCAAATCAATAGAAAAAAAGTATAAACAAAATTCAAAACTATTCAGTATTGATATTTGTTTACATTGAAAAAAAAATTAACTTAAAAAATATAGTTTACACAAAAAAGAAAAACCAAAAAAAAAATTGTTAGAGATTTTTTCAGAGTAGTGAGAGGAAAATGGCGCAGATGCAGCGAGAAGAAGTAGAGTCCGTCACGACGGAGAAGAAAAGATTAGACGGAGGCGGTGGATCTTCCGGCGCTCAGGCAACGGCGTTCAAATTCAACGCTCAAGCGCCGGAATTTGTACCGCGATCACATACCACCGCACCAGCACCGCAGGTTTCTCCTGTCTCCGGTTACTTTTATCCTTGTTTTCATTACAACGGTGGTTGCATAGGAGGATGTGGCGGCGGAGTCTGCGGTGGTGGAGGGACCGGCGTTGGTACTCAGTCGTCGGATTGGATCTACGTGGGAGGAGGAGATCCTACTGCTCAGCATCAACATGTTCATGATCCAGCGGCTGCGTTTTACATTTCGAATCCGGCGGTTCAGTTTCCGGCTAGTCAGAACTCGTCTTCTTCGTCGAAGAATCTGCTTTCCGATGATCTCCGCCTTAAGATCGTCAAACAGGTTGAGTACCAGTTTACGGACATGAGTCTCCTAGCCAACGAGTCCATTTCAAAGCATATAAGCAAAGACCCTGAAGGTTATGTGCCCGTATCCTATATCGCTTCGACCAAGAAGATCAAGGCTTTAACGAGTAATCACCACCTAGTTTCACTTGCTCTACGCTCCTCTTCAAAACTTGTTGTGAGTGAAGACGGCAAGAAAGTTAAGCGTACAAGTCAATTTACTGATAGAGACAGAGAGGAATTGCAGGGCCGGACTGTCGTTGCAGAGAATTTGCCAGATGATCATTCTTACCAGAACCTTGAGAAGATCTTTGGAGTTGTTGGAAACGTCAAAGCGATTCGTATATGTCATCCTCCAGAATCCAACTCGTCTCGTCCAAAAGGCGATTTCTTGATGAGCAACAAAATTCACGCCCTTATCGAGTATGACAACACTGTTATCGCGGACAAAGCAGTAGAGAAGCTAAACGATGAAAGAAACTGGAGGAAAGGGCTTCGTGTGAGGCTGCTTCTTAGATGCTCGCCAAAATCGGTGCTCAAGAACCGAAGAAACTTCGATGGAATCCTCATCGATGATGAACTCCCTTCTTATGAATCAGGAGAAGACTCTCCGCGTCTCCATTTAACCGAATCACAGCTTGATAACGATGGTGATGACAACAATGTTGGTGGACTGTGGGGTAAAGGGAGAGGAAAAGGACGAGGACGATCCCCAAGAAGCTACGCAGTAGGAGGAGGAGGACGTAGCTTCGGGATTGGGCTCGGAGTCAGCCTCGGGATACCCAGCCTGGGGTCACACGAATCTTCGTCTCCTAAAACAGCAACAAAGGGACCAAGAATGCCTGATGGAACCAGAGGCTTCACCATGGGACGTGGCAAACCTTCCATCTCACTCTCACCTAACAATCTCTAAATAGTTACCCACCACAAGGACTGCTATTTATAATTGATTTATTATAATAGAGGTAAAAGATTTTAGAGTTAATTAACCAAATAATACATATGGATTGGTTTTCCTAAGATGCATTCAAAAGAAGCAAGGCACATGACTTGGGAGAAGATAGTGAAGGCACGGTGACGTTTTTTGAGGGTTCGTTTTATATAACTTTTTTCATTTTTTGAGGCAATTTCTTTTCTGTATGTTTAATATGTTTTATTTTTGTGAGATTATTATTTGAATAATAAAGGGGTAATTTATATAGCACAAGAATTGC
  • >AT3G19090.2
    AGAGTGAGAAATAACCGAGAAGAACAAATCAAATCAATAGAAAAAAAGTATAAACAAAATTCAAAACTATTCAGTATTGATATTTGTTTACATTGAAAAAAAAATTAACTTAAAAAATATAGTTTACACAAAAAAGAAAAACCAAAAAAAAAATTGTTAGAGATTTTTTCAGAGTAGTGAGAGGAAAATGGCGCAGATGCAGCGAGAAGAAGTAGAGTCCGTCACGACGGAGAAGAAAAGATTAGACGGAGGCGGTGGATCTTCCGGCGCTCAGGCAACGGCGTTCAAATTCAACGCTCAAGCGCCGGAATTTGTACCGCGATCACATACCACCGCACCAGCACCGCAGGTTTCTCCTGTCTCCGGTTACTTTTATCCTTGTTTTCATTACAACGGTGGTTGCATAGGAGGATGTGGCGGCGGAGTCTGCGGTGGTGGAGGGACCGGCGTTGGTACTCAGTCGTCGGATTGGATCTACGTGGGAGGAGGAGATCCTACTGCTCAGCATCAACATGTTCATGATCCAGCGGCTGCGTTTTACATTTCGAATCCGGCGGTTCAGTTTCCGGCTAGTCAGAACTCGTCTTCTTCGTCGAAGAATCTGCTTTCCGATGATCTCCGCCTTAAGATCGTCAAACAGGTTGAGTACCAGTTTACGGACATGAGTCTCCTAGCCAACGAGTCCATTTCAAAGCATATAAGCAAAGACCCTGAAGGTTATGTGCCCGTATCCTATATCGCTTCGACCAAGAAGATCAAGGCTTTAACGAGTAATCACCACCTAGTTTCACTTGCTCTACGCTCCTCTTCAAAACTTGTTGTGAGTGAAGACGGCAAGAAAGTTAAGCGTACAAGTCAATTTACTGATAGAGACAGAGAGGAATTGCAGGGCCGGACTGTCGTTGCAGAGAATTTGCCAGATGATCATTCTTACCAGAACCTTGAGAAGATCTTTGGAGTTGTTGGAAACGTCAAAGCGATTCGTATATGTCATCCTCCAGAATCCAACTCGTCTCGTCCAAAAGGCGATTTCTTGATGAGCAACAAAATTCACGCCCTTATCGAGTATGACAACACTGTTATCGCGGACAAAGCAGTAGAGAAGCTAAACGATGAAAGAAACTGGAGGAAAGGGCTTCGTGTGAGGCTGCTTCTTAGATGCTCGCCAAAATCGGTGCTCAAGAACCGAAGAAACTTCGATGGAATCCTCATCGATGATGAACTCCCTTCTTATGAATCAGGAGAAGACTCTCCGCGTCTCCATTTAACCGAATCACAGCTTGATAACGATGGTGATGACAACAATGTTGGTGGACTGTGGGGTAAAGGGAGAGGAAAAGGACGAGGACGATCCCCAAGAAGCTACGCAGTAGGAGGAGGAGGACGTAGCTTCGGGATTGGGCTCGGAGTCAGCCTCGGGATACCCAGCCTGGGGTCACACGAATCTTCGTCTCCTAAAACAGCAACAAAGGGACCAAGAATGCCTGATGGAACCAGAGGCTTCACCATGGGACGTGGCAAACCTTCCATCTCACTCTCACCTAACAATCTCTAAATAGTTACCCACCACAAGGACTGCTATTTATAATTGATTTATTATAATAGAGGTAAAAGATTTTAGAGTTAATTAACCAAATAATACATATGGATTGGTTTTCCTAAGATGCATTCAAAAGAAGCAAGGCACATGACTTGGGAGAAGATAGTGAAGGCACGGTGACGTTTTTTGAGGGTTCGTTTTATATAACTTTTTTCATTTTTTGAGGCAATTTCTTTTCTGTATGTTTAATATGTTTTATTTTTGTGAGATTATTATTTGAATAATAAAGGGGTAATTTATATAGCACAAGAATTGC
CDS Sequence
  • >AT3G19090.1
    ATGGCGCAGATGCAGCGAGAAGAAGTAGAGTCCGTCACGACGGAGAAGAAAAGATTAGACGGAGGCGGTGGATCTTCCGGCGCTCAGGCAACGGCGTTCAAATTCAACGCTCAAGCGCCGGAATTTGTACCGCGATCACATACCACCGCACCAGCACCGCAGGTTTCTCCTGTCTCCGGTTACTTTTATCCTTGTTTTCATTACAACGGTGGTTGCATAGGAGGATGTGGCGGCGGAGTCTGCGGTGGTGGAGGGACCGGCGTTGGTACTCAGTCGTCGGATTGGATCTACGTGGGAGGAGGAGATCCTACTGCTCAGCATCAACATGTTCATGATCCAGCGGCTGCGTTTTACATTTCGAATCCGGCGGTTCAGTTTCCGGCTAGTCAGAACTCGTCTTCTTCGTCGAAGAATCTGCTTTCCGATGATCTCCGCCTTAAGATCGTCAAACAGGTTGAGTACCAGTTTACGGACATGAGTCTCCTAGCCAACGAGTCCATTTCAAAGCATATAAGCAAAGACCCTGAAGGTTATGTGCCCGTATCCTATATCGCTTCGACCAAGAAGATCAAGGCTTTAACGAGTAATCACCACCTAGTTTCACTTGCTCTACGCTCCTCTTCAAAACTTGTTGTGAGTGAAGACGGCAAGAAAGTTAAGCGTACAAGTCAATTTACTGATAGAGACAGAGAGGAATTGCAGGGCCGGACTGTCGTTGCAGAGAATTTGCCAGATGATCATTCTTACCAGAACCTTGAGAAGATCTTTGGAGTTGTTGGAAACGTCAAAGCGATTCGTATATGTCATCCTCCAGAATCCAACTCGTCTCGTCCAAAAGGCGATTTCTTGATGAGCAACAAAATTCACGCCCTTATCGAGTATGACAACACTGTTATCGCGGACAAAGCAGTAGAGAAGCTAAACGATGAAAGAAACTGGAGGAAAGGGCTTCGTGTGAGGCTGCTTCTTAGATGCTCGCCAAAATCGGTGCTCAAGAACCGAAGAAACTTCGATGGAATCCTCATCGATGATGAACTCCCTTCTTATGAATCAGGAGAAGACTCTCCGCGTCTCCATTTAACCGAATCACAGCTTGATAACGATGGTGATGACAACAATGTTGGTGGACTGTGGGGTAAAGGGAGAGGAAAAGGACGAGGACGATCCCCAAGAAGCTACGCAGTAGGAGGAGGAGGACGTAGCTTCGGGATTGGGCTCGGAGTCAGCCTCGGGATACCCAGCCTGGGGTCACACGAATCTTCGTCTCCTAAAACAGCAACAAAGGGACCAAGAATGCCTGATGGAACCAGAGGCTTCACCATGGGACGTGGCAAACCTTCCATCTCACTCTCACCTAACAATCTCTAA
  • >AT3G19090.2
    ATGGCGCAGATGCAGCGAGAAGAAGTAGAGTCCGTCACGACGGAGAAGAAAAGATTAGACGGAGGCGGTGGATCTTCCGGCGCTCAGGCAACGGCGTTCAAATTCAACGCTCAAGCGCCGGAATTTGTACCGCGATCACATACCACCGCACCAGCACCGCAGGTTTCTCCTGTCTCCGGTTACTTTTATCCTTGTTTTCATTACAACGGTGGTTGCATAGGAGGATGTGGCGGCGGAGTCTGCGGTGGTGGAGGGACCGGCGTTGGTACTCAGTCGTCGGATTGGATCTACGTGGGAGGAGGAGATCCTACTGCTCAGCATCAACATGTTCATGATCCAGCGGCTGCGTTTTACATTTCGAATCCGGCGGTTCAGTTTCCGGCTAGTCAGAACTCGTCTTCTTCGTCGAAGAATCTGCTTTCCGATGATCTCCGCCTTAAGATCGTCAAACAGGTTGAGTACCAGTTTACGGACATGAGTCTCCTAGCCAACGAGTCCATTTCAAAGCATATAAGCAAAGACCCTGAAGGTTATGTGCCCGTATCCTATATCGCTTCGACCAAGAAGATCAAGGCTTTAACGAGTAATCACCACCTAGTTTCACTTGCTCTACGCTCCTCTTCAAAACTTGTTGTGAGTGAAGACGGCAAGAAAGTTAAGCGTACAAGTCAATTTACTGATAGAGACAGAGAGGAATTGCAGGGCCGGACTGTCGTTGCAGAGAATTTGCCAGATGATCATTCTTACCAGAACCTTGAGAAGATCTTTGGAGTTGTTGGAAACGTCAAAGCGATTCGTATATGTCATCCTCCAGAATCCAACTCGTCTCGTCCAAAAGGCGATTTCTTGATGAGCAACAAAATTCACGCCCTTATCGAGTATGACAACACTGTTATCGCGGACAAAGCAGTAGAGAAGCTAAACGATGAAAGAAACTGGAGGAAAGGGCTTCGTGTGAGGCTGCTTCTTAGATGCTCGCCAAAATCGGTGCTCAAGAACCGAAGAAACTTCGATGGAATCCTCATCGATGATGAACTCCCTTCTTATGAATCAGGAGAAGACTCTCCGCGTCTCCATTTAACCGAATCACAGCTTGATAACGATGGTGATGACAACAATGTTGGTGGACTGTGGGGTAAAGGGAGAGGAAAAGGACGAGGACGATCCCCAAGAAGCTACGCAGTAGGAGGAGGAGGACGTAGCTTCGGGATTGGGCTCGGAGTCAGCCTCGGGATACCCAGCCTGGGGTCACACGAATCTTCGTCTCCTAAAACAGCAACAAAGGGACCAAGAATGCCTGATGGAACCAGAGGCTTCACCATGGGACGTGGCAAACCTTCCATCTCACTCTCACCTAACAATCTCTAA
Protein Sequence
  • >AT3G19090.1
    MAQMQREEVESVTTEKKRLDGGGGSSGAQATAFKFNAQAPEFVPRSHTTAPAPQVSPVSGYFYPCFHYNGGCIGGCGGGVCGGGGTGVGTQSSDWIYVGGGDPTAQHQHVHDPAAAFYISNPAVQFPASQNSSSSSKNLLSDDLRLKIVKQVEYQFTDMSLLANESISKHISKDPEGYVPVSYIASTKKIKALTSNHHLVSLALRSSSKLVVSEDGKKVKRTSQFTDRDREELQGRTVVAENLPDDHSYQNLEKIFGVVGNVKAIRICHPPESNSSRPKGDFLMSNKIHALIEYDNTVIADKAVEKLNDERNWRKGLRVRLLLRCSPKSVLKNRRNFDGILIDDELPSYESGEDSPRLHLTESQLDNDGDDNNVGGLWGKGRGKGRGRSPRSYAVGGGGRSFGIGLGVSLGIPSLGSHESSSPKTATKGPRMPDGTRGFTMGRGKPSISLSPNNL
  • >AT3G19090.2
    MAQMQREEVESVTTEKKRLDGGGGSSGAQATAFKFNAQAPEFVPRSHTTAPAPQVSPVSGYFYPCFHYNGGCIGGCGGGVCGGGGTGVGTQSSDWIYVGGGDPTAQHQHVHDPAAAFYISNPAVQFPASQNSSSSSKNLLSDDLRLKIVKQVEYQFTDMSLLANESISKHISKDPEGYVPVSYIASTKKIKALTSNHHLVSLALRSSSKLVVSEDGKKVKRTSQFTDRDREELQGRTVVAENLPDDHSYQNLEKIFGVVGNVKAIRICHPPESNSSRPKGDFLMSNKIHALIEYDNTVIADKAVEKLNDERNWRKGLRVRLLLRCSPKSVLKNRRNFDGILIDDELPSYESGEDSPRLHLTESQLDNDGDDNNVGGLWGKGRGKGRGRSPRSYAVGGGGRSFGIGLGVSLGIPSLGSHESSSPKTATKGPRMPDGTRGFTMGRGKPSISLSPNNL