Gene Details:
- Gene ID: AT3G18970
- Gene Symbol: MEF20
- Gene Name: mitochondrial editing factor 20
- Description: mitochondrial editing factor 20;(source:Araport11)
- TAIR Accession:
- Genome: Araport11_genome_release
- Species: Arabidopsis thaliana
Transcripts:
Germplasm Phenotype:
- SALK_008105C — Seedlings screened in bulk via high throughput methods for responses to various stressors. Results are in comparison to Col-0.heat:no change,cold:decreased,oxidative stress:decreased,osmotic stress:no change,salt stress:no change,ABA:no change,hypoxia:no change.
Literature:
- Reverse genetic screening identifies five E-class PPR proteins involved in RNA editing in mitochondria of Arabidopsis thaliana. DOI: 10.1074/jbc.M110.128611 ; PMID: 20566637
- The E-Subgroup Pentatricopeptide Repeat Protein Family in Arabidopsis thaliana and Confirmation of the Responsiveness PPR96 to Abiotic Stresses. DOI: 10.3389/fpls.2016.01825 ; PMID: 27994613
Sequences:
cDNA Sequence
- >AT3G18970.1
TGTCGTTATTGCGTCAGTGTCTCGTTTTTTCTCTCGGGTTTACTTTGTGTTATCGATGTGGATAAGTTGTTTTTACCTCATTATATATAACCTCTTGAGTGGAACTCAAATTGTTTGAGTAGAACAAACAAAGTTAGGGTTTAAGAAGAAGTCTGTAAATACCTAATCTCCATCAAATTTGGTACTTGTAGCCATGATGATGATTATGATGAAGATGGGTTTGTGCTGTAGATTCTTCGATATTTATTTTATCTCTTAGCTTTTGTTTCTCCTTCTCTTTGCCTTAATCCATTACAGTATCAGAGTTTGGTGCTTATGAGCTCTGTTTTTCCAGGACCAAGATTTTTGTCCTTGTTGCAACAGAATTCGAAAACCCTAATTCAAGCTAAGCAAATCCATGCTCAATTAGTCATCAATGGCTGCCATGATAATTCTCTATTTGGCAAACTCATAGGCCATTACTGTTCAAAGCCATCAACCGAAAGCAGCTCAAAGCTTGCTCATTTACTAGTGTTTCCTCGATTTGGTCATCCTGATAAGTTTCTCTTCAACACATTGCTTAAATGTAGCAAACCAGAGGACTCGATTCGGATTTTTGCCAATTATGCATCAAAAAGTTCGTTGCTTTATCTCAATGAGCGCACTTTTGTCTTCGTCCTTGGCGCTTGTGCTAGGTCAGCTTCGTCGTCGGCGTTACGGGTTGGTAGAATTGTTCATGGGATGGTGAAAAAGCTTGGCTTTCTATATGAATCTGAATTGATTGGAACCACTTTACTCCATTTCTACGCTAAGAATGGAGATTTACGTTATGCAAGGAAGGTGTTTGACGAAATGCCTGAGAGAACCTCTGTTACATGGAACGCAATGATAGGTGGATATTGTTCACATAAGGATAAAGGCAATCACAATGCGAGAAAGGCTATGGTTTTGTTTAGGAGATTCTCTTGCTGTGGTAGTGGAGTTAGACCTACTGATACAACCATGGTTTGTGTTCTTTCAGCCATTTCTCAGACGGGTTTGCTCGAAATTGGTTCTCTCGTTCATGGTTACATAGAAAAGCTCGGGTTCACACCCGAAGTTGATGTCTTTATCGGTACTGCACTTGTCGACATGTACTCAAAATGCGGCTGCTTGAACAACGCATTCTCCGTGTTCGAGCTAATGAAAGTGAAAAATGTCTTTACATGGACTTCAATGGCAACGGGGCTAGCTCTCAACGGTAGAGGAAACGAAACACCGAATCTTCTAAACCGAATGGCGGAATCTGGGATCAAACCAAACGAAATAACTTTCACTAGCTTGCTTTCGGCTTATCGTCATATAGGTCTTGTTGAAGAAGGAATCGAGCTGTTCAAGAGCATGAAGACAAGATTTGGTGTCACACCGGTTATCGAACACTATGGTTGCATAGTAGATCTTCTTGGTAAGGCAGGGCGGATACAAGAGGCTTATCAGTTTATATTAGCTATGCCTATAAAGCCTGACGCTATCTTGTTAAGAAGCCTCTGCAATGCCTGCAGCATTTATGGAGAGACTGTAATGGGTGAAGAGATCGGAAAGGCTCTTCTCGAGATAGAACGAGAGGACGAGAAGCTTTCGGGTTCTGAGTGCGAAGATTATGTCGCTTTATCGAATGTGTTAGCTCATAAAGGGAAATGGGTAGAGGTAGAGAAGCTGAGGAAGGAGATGAAAGAAAGAAGAATCAAAACAAGACCTGGTTACAGTTTTGTTTAACATAGCTTGTTACAGGTCTCGGTTCTGTTAAAAGCTCTGTTATCCCCTGAAGACTCTCTTGTCTTCTTCTTCTTCTTTAAGCACATGCATTGGATTCATCACATCAAGATCTACACATAGATTAAAAATATTCAGATCCCAATCTTCTTAATCTATATTAAGAACAAAGTCTTCTTACCGTGTAGAATCTTGTCAAGTTCGATGTCTCTTGATCTCTTCTTGGATTTGTGCTCTGTATCACCACCATTAACAGATTGATTATTCTTCCTTGTACCTTGAGTTCCAACAAA
CDS Sequence
- >AT3G18970.1
ATGAGCTCTGTTTTTCCAGGACCAAGATTTTTGTCCTTGTTGCAACAGAATTCGAAAACCCTAATTCAAGCTAAGCAAATCCATGCTCAATTAGTCATCAATGGCTGCCATGATAATTCTCTATTTGGCAAACTCATAGGCCATTACTGTTCAAAGCCATCAACCGAAAGCAGCTCAAAGCTTGCTCATTTACTAGTGTTTCCTCGATTTGGTCATCCTGATAAGTTTCTCTTCAACACATTGCTTAAATGTAGCAAACCAGAGGACTCGATTCGGATTTTTGCCAATTATGCATCAAAAAGTTCGTTGCTTTATCTCAATGAGCGCACTTTTGTCTTCGTCCTTGGCGCTTGTGCTAGGTCAGCTTCGTCGTCGGCGTTACGGGTTGGTAGAATTGTTCATGGGATGGTGAAAAAGCTTGGCTTTCTATATGAATCTGAATTGATTGGAACCACTTTACTCCATTTCTACGCTAAGAATGGAGATTTACGTTATGCAAGGAAGGTGTTTGACGAAATGCCTGAGAGAACCTCTGTTACATGGAACGCAATGATAGGTGGATATTGTTCACATAAGGATAAAGGCAATCACAATGCGAGAAAGGCTATGGTTTTGTTTAGGAGATTCTCTTGCTGTGGTAGTGGAGTTAGACCTACTGATACAACCATGGTTTGTGTTCTTTCAGCCATTTCTCAGACGGGTTTGCTCGAAATTGGTTCTCTCGTTCATGGTTACATAGAAAAGCTCGGGTTCACACCCGAAGTTGATGTCTTTATCGGTACTGCACTTGTCGACATGTACTCAAAATGCGGCTGCTTGAACAACGCATTCTCCGTGTTCGAGCTAATGAAAGTGAAAAATGTCTTTACATGGACTTCAATGGCAACGGGGCTAGCTCTCAACGGTAGAGGAAACGAAACACCGAATCTTCTAAACCGAATGGCGGAATCTGGGATCAAACCAAACGAAATAACTTTCACTAGCTTGCTTTCGGCTTATCGTCATATAGGTCTTGTTGAAGAAGGAATCGAGCTGTTCAAGAGCATGAAGACAAGATTTGGTGTCACACCGGTTATCGAACACTATGGTTGCATAGTAGATCTTCTTGGTAAGGCAGGGCGGATACAAGAGGCTTATCAGTTTATATTAGCTATGCCTATAAAGCCTGACGCTATCTTGTTAAGAAGCCTCTGCAATGCCTGCAGCATTTATGGAGAGACTGTAATGGGTGAAGAGATCGGAAAGGCTCTTCTCGAGATAGAACGAGAGGACGAGAAGCTTTCGGGTTCTGAGTGCGAAGATTATGTCGCTTTATCGAATGTGTTAGCTCATAAAGGGAAATGGGTAGAGGTAGAGAAGCTGAGGAAGGAGATGAAAGAAAGAAGAATCAAAACAAGACCTGGTTACAGTTTTGTTTAA
Protein Sequence
- >AT3G18970.1
MSSVFPGPRFLSLLQQNSKTLIQAKQIHAQLVINGCHDNSLFGKLIGHYCSKPSTESSSKLAHLLVFPRFGHPDKFLFNTLLKCSKPEDSIRIFANYASKSSLLYLNERTFVFVLGACARSASSSALRVGRIVHGMVKKLGFLYESELIGTTLLHFYAKNGDLRYARKVFDEMPERTSVTWNAMIGGYCSHKDKGNHNARKAMVLFRRFSCCGSGVRPTDTTMVCVLSAISQTGLLEIGSLVHGYIEKLGFTPEVDVFIGTALVDMYSKCGCLNNAFSVFELMKVKNVFTWTSMATGLALNGRGNETPNLLNRMAESGIKPNEITFTSLLSAYRHIGLVEEGIELFKSMKTRFGVTPVIEHYGCIVDLLGKAGRIQEAYQFILAMPIKPDAILLRSLCNACSIYGETVMGEEIGKALLEIEREDEKLSGSECEDYVALSNVLAHKGKWVEVEKLRKEMKERRIKTRPGYSFV