Information report for AT3G18960
Gene Details
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Functional Descriptions
- SALK_008105C — Seedlings screened in bulk via high throughput methods for responses to various stressors. Results are in comparison to Col-0.heat:no change,cold:decreased,oxidative stress:decreased,osmotic stress:no change,salt stress:no change,ABA:no change,hypoxia:no change.
Functional Keywords
Literature and News
Gene Resources
- UniProt: A0A178VGT7
- EMBL: CACRSJ010000106, CACSHJ010000089, LUHQ01000003
- AlphaFoldDB: A0A178VGT7
- EnsemblPlants: AT3G18960.1
- Gramene: AT3G18960.1
- KEGG: ath:AT3G18960
- ExpressionAtlas: AT3G18960
- InterPro: IPR003340, IPR015300, IPR050655
- PANTHER: PTHR31920, PTHR31920:SF37
- SUPFAM: SSF101936
- PROSITE: PS50863
- Gene3D: 2.40.330.10
- OrthoDB: A0A178VGT7
- SWISS-MODEL: A0A178VGT7
- Conserved Domain Database: cd10017
Homologs
- Brassica napus GSBRNA2T00107566001, GSBRNA2T00154015001, GSBRNA2T00127927001, GSBRNA2T00091100001
- Brassica oleracea XP_013638791.1, XP_013602987.1, XP_013602988.1
- Brassica rapa XP_009145838.1, XP_009107298.1
- Raphanus raphanistrum RrC1952_p1, RrC9933_p1
Sequences
cDNA Sequence
- >AT3G18960.1
AACTGTATAAAATGAGTCTTGGAAAACGACATAGAGTTAAAGCAACTTTGTCACTCTTGTCAGATAAAAACTTATCGGTTTCTCTTTTCCGGCTTTAACTCTCCACTCATCACTCTCCACTCTCAATTTTCACCTTCTCTTCTCTGAACAAGGCAAACAAAAATGGTTACAACCCAAAACACGAAGGCCAGAGTCACCTCCGTCTCTCACCGCCGATCACAGCAAGATCCTGAGTCGCCGGTGAAGAAGTTCTTCAAGTTGGTCTTACCTTCAACGATGAAGGATAAGATGATGAAGATTCCGCCAAGATTCGTGAAGCTACAAGGGTCTAAACTCTCAGAGGTTGTTACATTAGAGACTCCTGCGGGTTTCAAGCGTTCCATTAAGCTCAAACGGATCGGTGAAGAGATTTGGTTCCATGAGGGTTGGAGTGAGTTTGCAGAGGCTCATTCCATCGAGGAAGGCCACTTTCTCTTGTTCGAATACAAGGAGAATTCGAGTTTCCGTGTAATAATCTTCAATGTTTCGGCTTGCGAGACCAAATATCCACTGGATGCAGTTCATATCATTGACAGCGACGATGATATAATCGATATTACAGGCAAAGAGTTTGTTGGAACTCAAGGTACAAGGAAGAATAATCAATCTGTTAATGGTGGTGATACAGAGCACAAATCCAAGAAGAGATCAAGAGACATCGAACTTGACAAGATTCTACACGATCTTGATGTGATGAATCCAATGCATGTGCTTAAAGAAGAAGAAGAAGACAAGAGAGTCTTCAGGGGATAACAGAGCTTTTAACAGAACCGAGACCTGCAAGTTTATTTGTTGTGTAATGTTAATTAATGACTTGATGAAACTAAAAAACTTTCATTGCAAAATGAGTAGTGTTTTGAA - >AT3G18960.2
AACTGTATAAAATGAGTCTTGGAAAACGACATAGAGTTAAAGCAACTTTGTCACTCTTGTCAGATAAAAACTTATCGGTTTCTCTTTTCCGGCTTTAACTCTCCACTCATCACTCTCCACTCTCAATTTTCACCTTCTCTTCTCTGAACAAGGCAAACAAAAATGGTTACAACCCAAAACACGAAGGCCAGAGTCACCTCCGTCTCTCACCGCCGATCACAGCAAGATCCTGAGTCGCCGGTGAAGAAGTTCTTCAAGTTGGTCTTACCTTCAACGATGAAGGATAAGATGATGAAGATTCCGCCAAGATTCGTGAAGCTACAAGGGTCTAAACTCTCAGAGGTTGTTACATTAGAGACTCCTGCGGGTTTCAAGCGTTCCATTAAGCTCAAACGGATCGGTGAAGAGATTTGGTTCCATGAGGGTTGGAGTGAGTTTGCAGAGGCTCATTCCATCGAGGAAGGCCACTTTCTCTTGTTCGAATACAAGGAGAATTCGAGTTTCCGTGTAATAATCTTCAATGTTTCGGCTTGCGAGACCAAATATCCACTGGATGCAGTTCATATCATTGACAGCGACGATGATATAATCGATATTACAGGCAAAGAGTTTGTTGGAACTCAAGGTACAAGGAAGAATAATCAATCTGTTAATGGTGGTGATACAGAGCACAAATCCAAGAAGAGATCAAGAGACATCGAACTTGACAAGATTCTACACGATCTTGATGTGATGAATCCAATGCATGTGCTTAAAGAAGAAGAAGAAGACAAGAGAGTCTTCAGGGGATAACAGAGCTTTTAACAGAACCGAGACCTGCAAGTTTATTTGTTGTGTAATGTTAATTAATGACTTGATGAAACTAAAAAACTTTCATTGCAAAATGAGTAGTGTTTTGAA - >AT3G18960.3
AACTGTATAAAATGAGTCTTGGAAAACGACATAGAGTTAAAGCAACTTTGTCACTCTTGTCAGATAAAAACTTATCGGTTTCTCTTTTCCGGCTTTAACTCTCCACTCATCACTCTCCACTCTCAATTTTCACCTTCTCTTCTCTGAACAAGGCAAACAAAAATGGTTACAACCCAAAACACGAAGGCCAGAGTCACCTCCGTCTCTCACCGCCGATCACAGCAAGATCCTGAGTCGCCGGTGAAGAAGTTCTTCAAGTTGGTCTTACCTTCAACGATGAAGGATAAGATGATGAAGATTCCGCCAAGATTCGTGAAGCTACAAGGGTCTAAACTCTCAGAGGTTGTTACATTAGAGACTCCTGCGGGTTTCAAGCGTTCCATTAAGCTCAAACGGATCGGTGAAGAGATTTGGTTCCATGAGGGTTGGAGTGAGTTTGCAGAGGCTCATTCCATCGAGGAAGGCCACTTTCTCTTGTTCGAATACAAGGAGAATTCGAGTTTCCGTGTAATAATCTTCAATGTTTCGGCTTGCGAGACCAAATATCCACTGGATGCAGTTCATATCATTGACAGCGACGATGATATAATCGATATTACAGGCAAAGAGTTTGTTGGAACTCAAGGTACAAGGAAGAATAATCAATCTGTTAATGGTGGTGATACAGAGCACAAATCCAAGAAGAGATCAAGAGACATCGAACTTGACAAGATTCTACACGATCTTGATGTGATGAATCCAATGCATGTGCTTAAAGAAGAAGAAGAAGACAAGAGAGTCTTCAGGGGATAACAGAGCTTTTAACAGAACCGAGACCTGCAAGTTTATTTGTTGTGTAATGTTAATTAATGACTTGATGAAACTAAAAAACTTTCATTGCAAAATGAGTAGTGTTTTGAA
CDS Sequence
- >AT3G18960.1
ATGGTTACAACCCAAAACACGAAGGCCAGAGTCACCTCCGTCTCTCACCGCCGATCACAGCAAGATCCTGAGTCGCCGGTGAAGAAGTTCTTCAAGTTGGTCTTACCTTCAACGATGAAGGATAAGATGATGAAGATTCCGCCAAGATTCGTGAAGCTACAAGGGTCTAAACTCTCAGAGGTTGTTACATTAGAGACTCCTGCGGGTTTCAAGCGTTCCATTAAGCTCAAACGGATCGGTGAAGAGATTTGGTTCCATGAGGGTTGGAGTGAGTTTGCAGAGGCTCATTCCATCGAGGAAGGCCACTTTCTCTTGTTCGAATACAAGGAGAATTCGAGTTTCCGTGTAATAATCTTCAATGTTTCGGCTTGCGAGACCAAATATCCACTGGATGCAGTTCATATCATTGACAGCGACGATGATATAATCGATATTACAGGCAAAGAGTTTGTTGGAACTCAAGGTACAAGGAAGAATAATCAATCTGTTAATGGTGGTGATACAGAGCACAAATCCAAGAAGAGATCAAGAGACATCGAACTTGACAAGATTCTACACGATCTTGATGTGATGAATCCAATGCATGTGCTTAAAGAAGAAGAAGAAGACAAGAGAGTCTTCAGGGGATAA - >AT3G18960.2
ATGGTTACAACCCAAAACACGAAGGCCAGAGTCACCTCCGTCTCTCACCGCCGATCACAGCAAGATCCTGAGTCGCCGGTGAAGAAGTTCTTCAAGTTGGTCTTACCTTCAACGATGAAGGATAAGATGATGAAGATTCCGCCAAGATTCGTGAAGCTACAAGGGTCTAAACTCTCAGAGGTTGTTACATTAGAGACTCCTGCGGGTTTCAAGCGTTCCATTAAGCTCAAACGGATCGGTGAAGAGATTTGGTTCCATGAGGGTTGGAGTGAGTTTGCAGAGGCTCATTCCATCGAGGAAGGCCACTTTCTCTTGTTCGAATACAAGGAGAATTCGAGTTTCCGTGTAATAATCTTCAATGTTTCGGCTTGCGAGACCAAATATCCACTGGATGCAGTTCATATCATTGACAGCGACGATGATATAATCGATATTACAGGCAAAGAGTTTGTTGGAACTCAAGGTACAAGGAAGAATAATCAATCTGTTAATGGTGGTGATACAGAGCACAAATCCAAGAAGAGATCAAGAGACATCGAACTTGACAAGATTCTACACGATCTTGATGTGATGAATCCAATGCATGTGCTTAAAGAAGAAGAAGAAGACAAGAGAGTCTTCAGGGGATAA - >AT3G18960.3
ATGGTTACAACCCAAAACACGAAGGCCAGAGTCACCTCCGTCTCTCACCGCCGATCACAGCAAGATCCTGAGTCGCCGGTGAAGAAGTTCTTCAAGTTGGTCTTACCTTCAACGATGAAGGATAAGATGATGAAGATTCCGCCAAGATTCGTGAAGCTACAAGGGTCTAAACTCTCAGAGGTTGTTACATTAGAGACTCCTGCGGGTTTCAAGCGTTCCATTAAGCTCAAACGGATCGGTGAAGAGATTTGGTTCCATGAGGGTTGGAGTGAGTTTGCAGAGGCTCATTCCATCGAGGAAGGCCACTTTCTCTTGTTCGAATACAAGGAGAATTCGAGTTTCCGTGTAATAATCTTCAATGTTTCGGCTTGCGAGACCAAATATCCACTGGATGCAGTTCATATCATTGACAGCGACGATGATATAATCGATATTACAGGCAAAGAGTTTGTTGGAACTCAAGGTACAAGGAAGAATAATCAATCTGTTAATGGTGGTGATACAGAGCACAAATCCAAGAAGAGATCAAGAGACATCGAACTTGACAAGATTCTACACGATCTTGATGTGATGAATCCAATGCATGTGCTTAAAGAAGAAGAAGAAGACAAGAGAGTCTTCAGGGGATAA
Protein Sequence
- >AT3G18960.1
MVTTQNTKARVTSVSHRRSQQDPESPVKKFFKLVLPSTMKDKMMKIPPRFVKLQGSKLSEVVTLETPAGFKRSIKLKRIGEEIWFHEGWSEFAEAHSIEEGHFLLFEYKENSSFRVIIFNVSACETKYPLDAVHIIDSDDDIIDITGKEFVGTQGTRKNNQSVNGGDTEHKSKKRSRDIELDKILHDLDVMNPMHVLKEEEEDKRVFRG - >AT3G18960.2
MVTTQNTKARVTSVSHRRSQQDPESPVKKFFKLVLPSTMKDKMMKIPPRFVKLQGSKLSEVVTLETPAGFKRSIKLKRIGEEIWFHEGWSEFAEAHSIEEGHFLLFEYKENSSFRVIIFNVSACETKYPLDAVHIIDSDDDIIDITGKEFVGTQGTRKNNQSVNGGDTEHKSKKRSRDIELDKILHDLDVMNPMHVLKEEEEDKRVFRG - >AT3G18960.3
MVTTQNTKARVTSVSHRRSQQDPESPVKKFFKLVLPSTMKDKMMKIPPRFVKLQGSKLSEVVTLETPAGFKRSIKLKRIGEEIWFHEGWSEFAEAHSIEEGHFLLFEYKENSSFRVIIFNVSACETKYPLDAVHIIDSDDDIIDITGKEFVGTQGTRKNNQSVNGGDTEHKSKKRSRDIELDKILHDLDVMNPMHVLKEEEEDKRVFRG