Information report for AT3G18820
Gene Details
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Functional Descriptions
- PO:0025195 — pollen tube cell — célula del tubo polínico (Spanish, exact), 花粉管細胞 (Japanese, exact)
Functional Keywords
Literature and News
- Evolution of the Rab family of small GTP-binding proteins. DOI: 10.1006/jmbi.2001.5072 ; PMID: 11697911
- Analysis of the small GTPase gene superfamily of Arabidopsis. DOI: 10.1104/pp.013052 ; PMID: 12644670
- An ATP-binding cassette transporter GhWBC1 from elongating cotton fibers. DOI: 10.1104/pp.103.027052 ; PMID: 12972649
- Identification of new intrinsic proteins in Arabidopsis plasma membrane proteome. DOI: 10.1074/mcp.M400001-MCP200 ; PMID: 15060130
- Localization of organelle proteins by isotope tagging (LOPIT). DOI: 10.1074/mcp.T400009-MCP200 ; PMID: 15295017
- Control of root cap formation by MicroRNA-targeted auxin response factors in Arabidopsis. DOI: 10.1105/tpc.105.033076 ; PMID: 16006581
- VPS9a, the common activator for two distinct types of Rab5 GTPases, is essential for the development of Arabidopsis thaliana. DOI: 10.1105/tpc.107.053876 ; PMID: 18055610
- Global analysis of Arabidopsis gene expression uncovers a complex array of changes impacting pathogen response and cell cycle during geminivirus infection. DOI: 10.1104/pp.108.121038 ; PMID: 18650403
- Transcriptome analyses show changes in gene expression to accompany pollen germination and tube growth in Arabidopsis. DOI: 10.1104/pp.108.126375 ; PMID: 18775970
- Mechanisms governing the endosomal membrane recruitment of the core retromer in Arabidopsis. DOI: 10.1074/jbc.M112.440503 ; PMID: 23362252
- Retromer association with membranes: plants have their own rules! DOI: 10.4161/psb.25312 ; PMID: 23803747
- Activation of the Rab7 GTPase by the MON1-CCZ1 Complex Is Essential for PVC-to-Vacuole Trafficking and Plant Growth in Arabidopsis. DOI: 10.1105/tpc.114.123141 ; PMID: 24824487
- Identification of Regulatory and Cargo Proteins of Endosomal and Secretory Pathways in Arabidopsis thaliana by Proteomic Dissection. DOI: 10.1074/mcp.M115.050286 ; PMID: 25900983
- Interaction between VPS35 and RABG3f is necessary as a checkpoint to control fusion of late compartments with the vacuole. DOI: 10.1073/pnas.1905321116 ; PMID: 31570580
- Analysis of the Arabidopsis nuclear proteome and its response to cold stress. DOI: 10.1046/j.1365-313x.2003.01907.x ; PMID: 14617066
- A high content in lipid-modified peripheral proteins and integral receptor kinases features in the arabidopsis plasma membrane proteome. DOI: 10.1074/mcp.M700099-MCP200 ; PMID: 17644812
Gene Resources
- UniProt: A0A178VI56
- EMBL: CACRSJ010000106, CACSHJ010000089, LR881468
- AlphaFoldDB: A0A178VI56
- EnsemblPlants: AT3G18820.1
- Gramene: AT3G18820.1
- KEGG: ath:AT3G18820
- Orthologous matrix: FSHINSW
- ExpressionAtlas: AT3G18820
- InterPro: IPR001806, IPR005225, IPR027417
- PANTHER: PTHR47981, PTHR47981:SF4
- SUPFAM: SSF52540
- PROSITE: PS51419, PS51420, PS51421
- Gene3D: 3.40.50.300
- OrthoDB: A0A178VI56
- SWISS-MODEL: A0A178VI56
- Conserved Domain Database: cd01862
Homologs
- Arachis hypogaea arahy.Tifrunner.gnm1.ann1.WMY7WD
- Brassica napus GSBRNA2T00129504001, GSBRNA2T00109066001
- Cicer arietinum Ca_00017
- Fragaria vesca mrna29786.1-v1.0-hybrid
- Oryza sativa OsRab7;OsRab7B3, OsRab11C1, RGP1, OsRab11, OsRab6a
- Raphanus raphanistrum RrC3821_p1
- Solanum lycopersicum Solyc04g012180.3
Sequences
cDNA Sequence
- >AT3G18820.1
ATTAGAGGAATGATTCACTTTTAGTAAGAAGACAAAATAATAGTCACAAAAGAAATTAGAAGACAGATCAGGAACAGCTAGAAGACTCTTCAGGGCACAGAGAAAACACCCACCACATCACCGTCTTCTTCAACAAAATTTACCACCAGAGATCGCAGATATTTCTTCATTCTATCTCTCTCTTTTAGATCCGATTCGATGCCGTCCCGTAGACGTACCCTCCTCAAGGTCATCATCCTCGGTGATAGCGGGGTGGGAAAAACCTCTTTGATGAATCAGTATGTTAATAAAAAGTTCAGCAACCAGTACAAGGCAACCATTGGAGCCGACTTCTTGACCAAGGAAGTACAGTTTGAAGATCGACTTTTCACTTTACAGATCTGGGATACAGCTGGACAGGAAAGGTTTCAGAGCCTTGGTGTAGCCTTTTACCGTGGTGCTGATTGCTGTGTTCTTGTATATGATGTCAATTCCATGAAATCATTTGAAAATCTGAACAACTGGAGGGAAGAATTTCTGATCCAGGCGAGTCCATCAGATCCAGAGAATTTTCCATTTGTTCTTATCGGAAACAAGGTTGACGTGGATGATGGAAACAGCAGAGTGGTTTCAGAGAAAAAGGCTAAAGCTTGGTGTGCTTCAAAGGGGAACATTCCTTACTTTGAGACCTCTGCCAAGGTAGGTACTAATGTGGAGGAAGCTTTCCAATGCATTGCCAAGGACGCATTGAAGAGCGGAGAAGAAGAAGAACTATACTTGCCAGACACAATCGATGTAGGGACGAGCAATCAACAGAGGTCTACAGGGTGTGAATGCTAAGGAGTATCACCAGAAGGAAACGAGGCCTCTCCTCCCATTATCTCTTTTCGCAAGTTATGTCTACATTATTACTATGTTGTAAATTTTTTCTTTTGTGTGGAAAAGGGATGAGAACAAAAAAAGAAGGAACCCTAAAAAAAAAAGAGATTTGTTTAGTGTTATTTGTGGGGATTTTCATTTATCATGCTAGCTAAATAAATACTCACTTTCATCTTAATTTTAAGTGATGTTTCTTGTTTGCAAAGAAACACTAATAGCT
CDS Sequence
- >AT3G18820.1
ATGCCGTCCCGTAGACGTACCCTCCTCAAGGTCATCATCCTCGGTGATAGCGGGGTGGGAAAAACCTCTTTGATGAATCAGTATGTTAATAAAAAGTTCAGCAACCAGTACAAGGCAACCATTGGAGCCGACTTCTTGACCAAGGAAGTACAGTTTGAAGATCGACTTTTCACTTTACAGATCTGGGATACAGCTGGACAGGAAAGGTTTCAGAGCCTTGGTGTAGCCTTTTACCGTGGTGCTGATTGCTGTGTTCTTGTATATGATGTCAATTCCATGAAATCATTTGAAAATCTGAACAACTGGAGGGAAGAATTTCTGATCCAGGCGAGTCCATCAGATCCAGAGAATTTTCCATTTGTTCTTATCGGAAACAAGGTTGACGTGGATGATGGAAACAGCAGAGTGGTTTCAGAGAAAAAGGCTAAAGCTTGGTGTGCTTCAAAGGGGAACATTCCTTACTTTGAGACCTCTGCCAAGGTAGGTACTAATGTGGAGGAAGCTTTCCAATGCATTGCCAAGGACGCATTGAAGAGCGGAGAAGAAGAAGAACTATACTTGCCAGACACAATCGATGTAGGGACGAGCAATCAACAGAGGTCTACAGGGTGTGAATGCTAA
Protein Sequence
- >AT3G18820.1
MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFENLNNWREEFLIQASPSDPENFPFVLIGNKVDVDDGNSRVVSEKKAKAWCASKGNIPYFETSAKVGTNVEEAFQCIAKDALKSGEEEELYLPDTIDVGTSNQQRSTGCEC