Information report for AT3G18710
Gene Details
|
|
Functional Descriptions
- PO:0000056 — flower bud — floral bud (exact), yema floral (Spanish, exact), 花芽 (Japanese, exact)
- PO:0009025 — vascular leaf — foliage leaf (exact), hoja vascular (Spanish, exact), leaf, vascular (exact), vascular leaves (exact, plural), 維管束のある葉, または維管束植物の葉 (Japanese, exact), crozier (related), macrophyll (related), megaphyll (related), ascidia (narrow), ascidium (narrow), fiddlehead (narrow), frond (narrow), needle-like leaf (narrow), pitcher (narrow), pitcher blade (narrow), pitcher-blade (narrow), scale-like leaf (narrow), sterile frond (narrow), trophophyll (narrow)
- PO:0009047 — stem — caña (Spanish, exact), culm (exact), eje primario (Spanish, exact), primary axis (exact), primary stem (exact), tallo (Spanish, exact), tronco (Spanish, exact), 茎 (Japanese, exact), bole (narrow), cane (narrow), caudex (narrow), caudices (narrow), core (narrow), primocane (narrow), scape (narrow), stalk (narrow), trunk (narrow)
- PO:0000084 — plant sperm cell — célula espermática o esperma (Spanish, exact), male gamete (exact), microgamete (exact), 植物精子細胞 (Japanese, exact), sperm nucleus (related), sperm cell (broad)
Functional Keywords
Literature and News
- Armadillo repeat proteins: beyond the animal kingdom. DOI: 10.1016/s0962-8924(03)00167-3 ; PMID: 12946625
- A large complement of the predicted Arabidopsis ARM repeat proteins are members of the U-box E3 ubiquitin ligase family. DOI: 10.1104/pp.103.029553 ; PMID: 14657406
- Identification of 118 Arabidopsis transcription factor and 30 ubiquitin-ligase genes responding to chitin, a plant-defense elicitor. DOI: 10.1094/MPMI-20-8-0900 ; PMID: 17722694
- Interactions between the S-domain receptor kinases and AtPUB-ARM E3 ubiquitin ligases suggest a conserved signaling pathway in Arabidopsis. DOI: 10.1104/pp.108.123380 ; PMID: 18552232
- Arabidopsis PUB22 and PUB23 are homologous U-Box E3 ubiquitin ligases that play combinatory roles in response to drought stress. DOI: 10.1105/tpc.108.060699 ; PMID: 18664614
- News from the PUB: plant U-box type E3 ubiquitin ligases. DOI: 10.1093/jxb/erx411 ; PMID: 29237060
- Identification of 118 Arabidopsis transcription factor and 30 ubiquitin-ligase genes responding to chitin, a plant-defense elicitor. DOI: 10.1094/MPMI-20-8-0900 ; PMID: 17722694
Gene Resources
- UniProt: A0A178VJJ8
- EMBL: CACRSJ010000106, LR881468, LUHQ01000003
- AlphaFoldDB: A0A178VJJ8
- EnsemblPlants: AT3G18710.1
- Gramene: AT3G18710.1
- KEGG: ath:AT3G18710
- Orthologous matrix: AILWSGC
- ExpressionAtlas: AT3G18710
- InterPro: IPR003613, IPR011989, IPR013083
- PANTHER: PTHR22849, PTHR22849:SF113
- SUPFAM: SSF48371, SSF57850
- PROSITE: PS51698
- Gene3D: 1.25.10.10, 3.30.40.10
- SWISS-MODEL: A0A178VJJ8
- Conserved Domain Database: cd16664
Homologs
- Hordeum vulgare HORVU4Hr1G059610
- Malus domestica MdPUB23, MdPUB29
- Oryza sativa TUD1;DSG1
Sequences
cDNA Sequence
- >AT3G18710.1
CAGAGTTTGTTTTAAGTAACACAAATATTATAACATTGCTTTTGTAATCATTTGTTTTTAAATTTCATTCATAAAAAAAGTACTAAAAACAGGACATTATATGGACCAAACCCATGTGCTCTCGACGAGACCAAAATAGGCCACTCGTGCAGAGAACATGTCCCACCACTCCCACACGCTTCTGGCCTCCAAACTCACACGTGTAAGCAAGCATAAATAAAAGATCGTCACCGTTGGTCAAAGTCCTCCCATCAACAACACATCTTAACGGTTACGACTTGACCCAATCCCCTGACTCTGAAACGTTCTTTGATTTTTGACCCATGACCAGAATTTTTGTTGATTCTTTAAAATTTCTGACTTGTCATCAACATTAACATCTTTAATACACTACTACTATAGTATATAGTATAATCTTGCTACGGTGACGCAAGCGTGCGTTTGACTCTCTCTTAAAATCCCACCTCCACTCACTTTCTCTCTTCACCTTTCACTTAGCATCATCTTCACTTTCCCGCATTTTCTCTGCCCAGATTTTCTCTGATTCTTTTGTTGTTTTTTTCTGATGGGGAGAGATGAAACAGAGACGTACATTACAGTGCCAAGTTTCTTCAAATGTCCGATATCTCTTGACGTGATGAGATCTCCGGTTAGTCTCTGTACCGGCGTGACTTATGATCGAGCCAGTATCCAGAGATGGCTCGATGGTGGTAACAACACTTGTCCCGCTACTATGCAACTTCTCAAAACTAAAGATTTTGTTCCTAACCTCACTCTTCAACGTCTTATCAATATCTGGTCTGATTCAATCGGCCGTCGTCACAACGGTGATTCTCCGGTTCTGAATCCGCCGTCTGGTAGAGAAGTTCCGACGAAGGAAGAAGTGAATGTGTTGTTGGAGAGATTGATGAGTCTGGAGAATTTGATGAAGATCGTTCGATTCGTGAAGGATTCGGATTCGAACAGAGAGTTTCTCTCGAAGAAGATGGAGTTCGTACCAATGCTCGTTGATATTATACGCACGAAGAAGACGAAGATCGAGTTAGTTATAATGGCGATTAGGATTTTGGATTCGATTAAAGTAGATCGTGAACGGTTATCGAATCTGATGTTGGCGAATGACGGCGGAGATTGTTTAACGGCGATTCTCTTAGCGATTCAACGCGGGAATCTGGAATCGAAGATCGAATCGGTTCGGGTTTTGGATTGGATCTCCTTCGACGCTAAATCAAAGCTTATGATAGCAGAACGTGACGGAGTTTTAACAGAGATGATGAAATCGATAAGTATCACTGAGTCGTCAGATCCGAGTTTGATCGAAGCGAGTTTATCGTTTCTAATCACAATCTCCAAATCAAAACGAGTGAGATCGAAACTAATCGCTGCAAAAGCAATCACGAAGATCAAAGACATTCTTCTGACGGAGACGTTAACAAACGTTGCCGTGACGGAGAAGTCGTTGAAGCTGTTAGAGACTTTATCGTCAAAGCGAGAAGGGAGATTGGAGATTTGTGGAGACGACAATGGTAGATGTGTGGAAGGAGTGGTGAAGAAGCTCTTGAAAGTATCGACGACGGCGACGGAACACGCCGTGACGATTTTGTGGTGTTTGTGTTATGTTTTCAGGGAAGATAAGACGGTGGAAGAGACGGTGGAGAGAAGTAACGGAGTTACGAAGCTGTTAGTGGTGATACAGAGCAATTGTTCGGCGATGGTTAGACAAATGGCGAAAGATTTGATTAAAGTGTTGAAGTTTAATTCCTCTGCTTTGGCTGCTTACGAGACCAAGACTACTCATATTATGCCTTTTTGATTTTTTAGTAGTACATTATGAATAAATATGATATAAGTAAATCTTATTATCAAACTATTTTGAACGTATAGATGTTGTAAATCTTATGAGAAATTTTGTCAGTTTTACTAATATTTGCCTCGTGTTAATTGAGAATTATACGATTTAATTAC
CDS Sequence
- >AT3G18710.1
ATGGGGAGAGATGAAACAGAGACGTACATTACAGTGCCAAGTTTCTTCAAATGTCCGATATCTCTTGACGTGATGAGATCTCCGGTTAGTCTCTGTACCGGCGTGACTTATGATCGAGCCAGTATCCAGAGATGGCTCGATGGTGGTAACAACACTTGTCCCGCTACTATGCAACTTCTCAAAACTAAAGATTTTGTTCCTAACCTCACTCTTCAACGTCTTATCAATATCTGGTCTGATTCAATCGGCCGTCGTCACAACGGTGATTCTCCGGTTCTGAATCCGCCGTCTGGTAGAGAAGTTCCGACGAAGGAAGAAGTGAATGTGTTGTTGGAGAGATTGATGAGTCTGGAGAATTTGATGAAGATCGTTCGATTCGTGAAGGATTCGGATTCGAACAGAGAGTTTCTCTCGAAGAAGATGGAGTTCGTACCAATGCTCGTTGATATTATACGCACGAAGAAGACGAAGATCGAGTTAGTTATAATGGCGATTAGGATTTTGGATTCGATTAAAGTAGATCGTGAACGGTTATCGAATCTGATGTTGGCGAATGACGGCGGAGATTGTTTAACGGCGATTCTCTTAGCGATTCAACGCGGGAATCTGGAATCGAAGATCGAATCGGTTCGGGTTTTGGATTGGATCTCCTTCGACGCTAAATCAAAGCTTATGATAGCAGAACGTGACGGAGTTTTAACAGAGATGATGAAATCGATAAGTATCACTGAGTCGTCAGATCCGAGTTTGATCGAAGCGAGTTTATCGTTTCTAATCACAATCTCCAAATCAAAACGAGTGAGATCGAAACTAATCGCTGCAAAAGCAATCACGAAGATCAAAGACATTCTTCTGACGGAGACGTTAACAAACGTTGCCGTGACGGAGAAGTCGTTGAAGCTGTTAGAGACTTTATCGTCAAAGCGAGAAGGGAGATTGGAGATTTGTGGAGACGACAATGGTAGATGTGTGGAAGGAGTGGTGAAGAAGCTCTTGAAAGTATCGACGACGGCGACGGAACACGCCGTGACGATTTTGTGGTGTTTGTGTTATGTTTTCAGGGAAGATAAGACGGTGGAAGAGACGGTGGAGAGAAGTAACGGAGTTACGAAGCTGTTAGTGGTGATACAGAGCAATTGTTCGGCGATGGTTAGACAAATGGCGAAAGATTTGATTAAAGTGTTGAAGTTTAATTCCTCTGCTTTGGCTGCTTACGAGACCAAGACTACTCATATTATGCCTTTTTGA
Protein Sequence
- >AT3G18710.1
MGRDETETYITVPSFFKCPISLDVMRSPVSLCTGVTYDRASIQRWLDGGNNTCPATMQLLKTKDFVPNLTLQRLINIWSDSIGRRHNGDSPVLNPPSGREVPTKEEVNVLLERLMSLENLMKIVRFVKDSDSNREFLSKKMEFVPMLVDIIRTKKTKIELVIMAIRILDSIKVDRERLSNLMLANDGGDCLTAILLAIQRGNLESKIESVRVLDWISFDAKSKLMIAERDGVLTEMMKSISITESSDPSLIEASLSFLITISKSKRVRSKLIAAKAITKIKDILLTETLTNVAVTEKSLKLLETLSSKREGRLEICGDDNGRCVEGVVKKLLKVSTTATEHAVTILWCLCYVFREDKTVEETVERSNGVTKLLVVIQSNCSAMVRQMAKDLIKVLKFNSSALAAYETKTTHIMPF