Information report for AT3G18680
Gene Details
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Functional Descriptions
- PO:0000084 — plant sperm cell — célula espermática o esperma (Spanish, exact), male gamete (exact), microgamete (exact), 植物精子細胞 (Japanese, exact), sperm nucleus (related), sperm cell (broad)
- pumpkin — Photobleached seedlings. Delayed growth.
Functional Keywords
Literature and News
- A high-throughput Arabidopsis reverse genetics system. DOI: 10.1105/tpc.004630 ; PMID: 12468722
- Inactivation of the chloroplast ATP synthase gamma subunit results in high non-photochemical fluorescence quenching and altered nuclear gene expression in Arabidopsis thaliana. DOI: 10.1074/jbc.M308435200 ; PMID: 14576160
- Global analysis of Arabidopsis gene expression uncovers a complex array of changes impacting pathogen response and cell cycle during geminivirus infection. DOI: 10.1104/pp.108.121038 ; PMID: 18650403
- Identification of nuclear genes encoding chloroplast-localized proteins required for embryo development in Arabidopsis. DOI: 10.1104/pp.110.168120 ; PMID: 21139083
- Heterosis manifestation during early Arabidopsis seedling development is characterized by intermediate gene expression and enhanced metabolic activity in the hybrids. DOI: 10.1111/j.1365-313X.2012.05021.x ; PMID: 22487254
- PUMPKIN, the Sole Plastid UMP Kinase, Associates with Group II Introns and Alters Their Metabolism. DOI: 10.1104/pp.18.00687 ; PMID: 30409856
- Sorting signals, N-terminal modifications and abundance of the chloroplast proteome. DOI: 10.1371/journal.pone.0001994 ; PMID: 18431481
Gene Resources
- UniProt: A0A654F9I2
- EMBL: CACRSJ010000106
- AlphaFoldDB: A0A654F9I2
- EnsemblPlants: AT3G18680.1
- Gramene: AT3G18680.1
- KEGG: ath:AT3G18680
- Orthologous matrix: LMGDKQF
- ExpressionAtlas: AT3G18680
- InterPro: IPR001048, IPR015963, IPR036393
- PANTHER: PTHR42833, PTHR42833:SF4
- SUPFAM: SSF53633
- Gene3D: 3.40.1160.10
- SWISS-MODEL: A0A654F9I2
- Conserved Domain Database: cd04254
Homologs
- Citrullus lanatus Cla017741
- Cucumis melo MELO3C009423P1
- Glycine max Glyma.10G201400.1.p
- Manihot esculenta Manes.07G092200.1.p
- Oryza sativa YGL8;YL2
- Vitis vinifera GSVIVT01033748001, GSVIVT01034687001
Sequences
cDNA Sequence
- >AT3G18680.1
ATTCATTTGATTAATTAGTAAATTACATTGAAACCAGACCTTATCTTCTCAGACTTAAAACCCGTCTTTGCCGGCGACACTTCTCTACTGAATATTTCAGTAAATAATCTCTTCTTAGATCTCTCCGGCAATGGCAATTCCGTTGCCTCTTACCTCTTGCTCCCCAATCTCAACTTCTTCGTCTATTTCCCGAACCTCCTTCGTCCCTCTTACACTTCGCAATCGTACTTTCTTCTCCAACCAGAATTACAGTAGGCGTGTACTTATCAGCTGCTCTTCTTCTTTGTCCTCAGACAATGGTTCATCTCCAGACTCCATGAACGGAAACGGGAACGGGAACGGGAGTAGCTTAAACGGGCAATCATCTTTCCCACGACTGCCTTCCTTTGATGGAACATCCAAACCACCGCTTAAATGGAGAAGGGTTTTACTCAAAGTCAGTGGAGAAGCTCTTGCTGGAGACGAGGAGCAAAATATCGACCCAAAGGTTACTATGGCGATTGCAAGGGAAGTTGCAGCAGTGACTCGACTTGGCATTGAGGTTGCTATAGTTGTTGGAGGAGGAAATATCTTTCGTGGATCTACCTGGGCTGGGTGCAGTGGCCTTGATCGCTCCTCTGCTGATTATATCGGGATGCTGGCAACTGTGATGAATGCAATATTTCTTCAAGCGACAATGGAGAGTATTGGCATCCCAACCCGTGTTCAAACTGCTTTCCGCATGTCGGAAGTCGCAGAGCCTTACATAAGAAGACGAGCAATCAGACATCTAGAAAAAGGAAGGGTTGTAATATTTGCAGCTGGAACAGGCAATCCATTTTTCACCACCGATACTGCAGCGGCTCTTCGATGTGCTGAAATTAATGCAGAAGTAGTGCTGAAAGCAACAAATGTTGATGGCGTGTTCGACGATGATCCTAAAAGAAACCCAAACGCTCGTCTGCTTGACTCACTAACTTACCAAGAGGTCACCTCAAAGGACCTCTCTGTAATGGATATGACTGCTATCACTTTGTGCCAAGAAAATAACATCCCAGTTGTGGTATTCAATCTTTCGGAACCTGGGAACATCGCCAAAGCAATCAAAGGAGAGAGAGTTGGTACATTGATAGGAGGAACTTGGAACTCCATTGTTACAACAACCTCATGAAGAAGCCTATTCTCAAAACACAAAACTTATTAGAGTATCTTAGGTCAGGAGAATCTTGTAACTCCTGTATATATTAGTTTGCAGACAAGTTTTACATTCTAGGAATCTGTCTGAAATTTTTGAAAGTTAATCTTTTTATACATGAAGCTCATTTTAAACCCTTTGGGCTACT - >AT3G18680.2
ATTCATTTGATTAATTAGTAAATTACATTGAAACCAGACCTTATCTTCTCAGACTTAAAACCCGTCTTTGCCGGCGACACTTCTCTACTGAATATTTCAGTAAATAATCTCTTCTTAGATCTCTCCGGCAATGGCAATTCCGTTGCCTCTTACCTCTTGCTCCCCAATCTCAACTTCTTCGTCTATTTCCCGAACCTCCTTCGTCCCTCTTACACTTCGCAATCGTACTTTCTTCTCCAACCAGAATTACAGTAGGCGTGTACTTATCAGCTGCTCTTCTTCTTTGTCCTCAGACAATGGTTCATCTCCAGACTCCATGAACGGAAACGGGAACGGGAACGGGAGTAGCTTAAACGGGCAATCATCTTTCCCACGACTGCCTTCCTTTGATGGAACATCCAAACCACCGCTTAAATGGAGAAGGGTTTTACTCAAAGTCAGTGGAGAAGCTCTTGCTGGAGACGAGGAGCAAAATATCGACCCAAAGGTTACTATGGCGATTGCAAGGGAAGTTGCAGCAGTGACTCGACTTGGCATTGAGGTTGCTATAGTTGTTGGAGGAGGAAATATCTTTCGTGGATCTACCTGGGCTGGGTGCAGTGGCCTTGATCGCTCCTCTGCTGATTATATCGGGATGCTGGCAACTGTGATGAATGCAATATTTCTTCAAGCGACAATGGAGAGTATTGGCATCCCAACCCGTGTTCAAACTGCTTTCCGCATGTCGGAAGTCGCAGAGCCTTACATAAGAAGACGAGCAATCAGACATCTAGAAAAAGGAAGGGTTGTAATATTTGCAGCTGGAACAGGCAATCCATTTTTCACCACCGATACTGCAGCGGCTCTTCGATGTGCTGAAATTAATGCAGAAGTAGTGCTGAAAGCAACAAATGTTGATGGCGTGTTCGACGATGATCCTAAAAGAAACCCAAACGCTCGTCTGCTTGACTCACTAACTTACCAAGAGGTCACCTCAAAGGACCTCTCTGTAATGGATATGACTGCTATCACTTTGTGCCAAGAAAATAACATCCCAGTTGTGGTATTCAATCTTTCGGAACCTGGGAACATCGCCAAAGCAATCAAAGGAGAGAGAGTTGGTACATTGATAGGAGGAACTTGGAACTCCATTGTTACAACAACCTCATGAAGAAGCCTATTCTCAAAACACAAAACTTATTAGAGTATCTTAGGTCAGGAGAATCTTGTAACTCCTGTATATATTAGTTTGCAGACAAGTTTTACATTCTAGGAATCTGTCTGAAATTTTTGAAAGTTAATCTTTTTATACATGAAGCTCATTTTAAACCCTTTGGGCTACT
CDS Sequence
- >AT3G18680.1
ATGGCAATTCCGTTGCCTCTTACCTCTTGCTCCCCAATCTCAACTTCTTCGTCTATTTCCCGAACCTCCTTCGTCCCTCTTACACTTCGCAATCGTACTTTCTTCTCCAACCAGAATTACAGTAGGCGTGTACTTATCAGCTGCTCTTCTTCTTTGTCCTCAGACAATGGTTCATCTCCAGACTCCATGAACGGAAACGGGAACGGGAACGGGAGTAGCTTAAACGGGCAATCATCTTTCCCACGACTGCCTTCCTTTGATGGAACATCCAAACCACCGCTTAAATGGAGAAGGGTTTTACTCAAAGTCAGTGGAGAAGCTCTTGCTGGAGACGAGGAGCAAAATATCGACCCAAAGGTTACTATGGCGATTGCAAGGGAAGTTGCAGCAGTGACTCGACTTGGCATTGAGGTTGCTATAGTTGTTGGAGGAGGAAATATCTTTCGTGGATCTACCTGGGCTGGGTGCAGTGGCCTTGATCGCTCCTCTGCTGATTATATCGGGATGCTGGCAACTGTGATGAATGCAATATTTCTTCAAGCGACAATGGAGAGTATTGGCATCCCAACCCGTGTTCAAACTGCTTTCCGCATGTCGGAAGTCGCAGAGCCTTACATAAGAAGACGAGCAATCAGACATCTAGAAAAAGGAAGGGTTGTAATATTTGCAGCTGGAACAGGCAATCCATTTTTCACCACCGATACTGCAGCGGCTCTTCGATGTGCTGAAATTAATGCAGAAGTAGTGCTGAAAGCAACAAATGTTGATGGCGTGTTCGACGATGATCCTAAAAGAAACCCAAACGCTCGTCTGCTTGACTCACTAACTTACCAAGAGGTCACCTCAAAGGACCTCTCTGTAATGGATATGACTGCTATCACTTTGTGCCAAGAAAATAACATCCCAGTTGTGGTATTCAATCTTTCGGAACCTGGGAACATCGCCAAAGCAATCAAAGGAGAGAGAGTTGGTACATTGATAGGAGGAACTTGGAACTCCATTGTTACAACAACCTCATGA - >AT3G18680.2
ATGGCAATTCCGTTGCCTCTTACCTCTTGCTCCCCAATCTCAACTTCTTCGTCTATTTCCCGAACCTCCTTCGTCCCTCTTACACTTCGCAATCGTACTTTCTTCTCCAACCAGAATTACAGTAGGCGTGTACTTATCAGCTGCTCTTCTTCTTTGTCCTCAGACAATGGTTCATCTCCAGACTCCATGAACGGAAACGGGAACGGGAACGGGAGTAGCTTAAACGGGCAATCATCTTTCCCACGACTGCCTTCCTTTGATGGAACATCCAAACCACCGCTTAAATGGAGAAGGGTTTTACTCAAAGTCAGTGGAGAAGCTCTTGCTGGAGACGAGGAGCAAAATATCGACCCAAAGGTTACTATGGCGATTGCAAGGGAAGTTGCAGCAGTGACTCGACTTGGCATTGAGGTTGCTATAGTTGTTGGAGGAGGAAATATCTTTCGTGGATCTACCTGGGCTGGGTGCAGTGGCCTTGATCGCTCCTCTGCTGATTATATCGGGATGCTGGCAACTGTGATGAATGCAATATTTCTTCAAGCGACAATGGAGAGTATTGGCATCCCAACCCGTGTTCAAACTGCTTTCCGCATGTCGGAAGTCGCAGAGCCTTACATAAGAAGACGAGCAATCAGACATCTAGAAAAAGGAAGGGTTGTAATATTTGCAGCTGGAACAGGCAATCCATTTTTCACCACCGATACTGCAGCGGCTCTTCGATGTGCTGAAATTAATGCAGAAGTAGTGCTGAAAGCAACAAATGTTGATGGCGTGTTCGACGATGATCCTAAAAGAAACCCAAACGCTCGTCTGCTTGACTCACTAACTTACCAAGAGGTCACCTCAAAGGACCTCTCTGTAATGGATATGACTGCTATCACTTTGTGCCAAGAAAATAACATCCCAGTTGTGGTATTCAATCTTTCGGAACCTGGGAACATCGCCAAAGCAATCAAAGGAGAGAGAGTTGGTACATTGATAGGAGGAACTTGGAACTCCATTGTTACAACAACCTCATGA
Protein Sequence
- >AT3G18680.1
MAIPLPLTSCSPISTSSSISRTSFVPLTLRNRTFFSNQNYSRRVLISCSSSLSSDNGSSPDSMNGNGNGNGSSLNGQSSFPRLPSFDGTSKPPLKWRRVLLKVSGEALAGDEEQNIDPKVTMAIAREVAAVTRLGIEVAIVVGGGNIFRGSTWAGCSGLDRSSADYIGMLATVMNAIFLQATMESIGIPTRVQTAFRMSEVAEPYIRRRAIRHLEKGRVVIFAAGTGNPFFTTDTAAALRCAEINAEVVLKATNVDGVFDDDPKRNPNARLLDSLTYQEVTSKDLSVMDMTAITLCQENNIPVVVFNLSEPGNIAKAIKGERVGTLIGGTWNSIVTTTS - >AT3G18680.2
MAIPLPLTSCSPISTSSSISRTSFVPLTLRNRTFFSNQNYSRRVLISCSSSLSSDNGSSPDSMNGNGNGNGSSLNGQSSFPRLPSFDGTSKPPLKWRRVLLKVSGEALAGDEEQNIDPKVTMAIAREVAAVTRLGIEVAIVVGGGNIFRGSTWAGCSGLDRSSADYIGMLATVMNAIFLQATMESIGIPTRVQTAFRMSEVAEPYIRRRAIRHLEKGRVVIFAAGTGNPFFTTDTAAALRCAEINAEVVLKATNVDGVFDDDPKRNPNARLLDSLTYQEVTSKDLSVMDMTAITLCQENNIPVVVFNLSEPGNIAKAIKGERVGTLIGGTWNSIVTTTS