Information report for AT3G18524
Gene Details
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Functional Descriptions
- CS2111593 — Large vegetative rosette, increased rosette and cauline leaf number, late flowering, female-sterile.
- CS2111596 — Male-sterile
- CS2111598 — Late flowering, very large vegetative rosette, increased vegetative rosette leaf number.
- CS2111600 — Abnormal flower development, variable pod-set.
- atmsh2-1 — Increased meiotic recombination between divergent sequences tested using marker lines.
Functional Keywords
Literature and News
- The impact of sequence divergence and DNA mismatch repair on homeologous recombination in Arabidopsis. DOI: 10.1111/j.1365-313X.2006.02657.x ; PMID: 16507082
- Microsatellite instability in Arabidopsis increases with plant development. DOI: 10.1104/pp.110.162933 ; PMID: 20817752
- Cell cycle arrest mediated by Cd-induced DNA damage in Arabidopsis root tips. DOI: 10.1016/j.ecoenv.2017.07.074 ; PMID: 28800532
- Roles of MSH2 and MSH6 in cadmium-induced G2/M checkpoint arrest in Arabidopsis roots. DOI: 10.1016/j.chemosphere.2018.03.017 ; PMID: 29533809
- Interhomolog polymorphism shapes meiotic crossover within the Arabidopsis RAC1 and RPP13 disease resistance genes. DOI: 10.1371/journal.pgen.1007843 ; PMID: 30543623
- Interactome Analysis and Docking Sites of MutS Homologs Reveal New Physiological Roles in Arabidopsis thaliana. DOI: 10.3390/molecules24132493 ; PMID: 31288414
- Deficiency of the Arabidopsis mismatch repair MSH6 attenuates Pseudomonas syringae invasion. DOI: 10.1016/j.plantsci.2023.111713 ; PMID: 37068662
- Large-scale analysis of in vivo phosphorylated membrane proteins by immobilized metal ion affinity chromatography and mass spectrometry. DOI: 10.1074/mcp.T300006-MCP200 ; PMID: 14506206
Gene Resources
- UniProt: A0A654F8E8
- EMBL: CACRSJ010000106
- AlphaFoldDB: A0A654F8E8
- EnsemblPlants: AT3G18524.1
- Gramene: AT3G18524.1
- KEGG: ath:AT3G18524
- Orthologous matrix: LVRFPQK
- ExpressionAtlas: AT3G18524
- InterPro: IPR000432, IPR007695, IPR007696
- PANTHER: PTHR11361, PTHR11361:SF35
- SUPFAM: SSF48334, SSF52540
- PROSITE: PS00486
- Gene3D: 1.10.1420.10, 3.30.420.110, 3.40.1170.10
- SWISS-MODEL: A0A654F8E8
- Conserved Domain Database: cd03285
Homologs
- Capsicum annuum CA06g18030
- Oryza sativa MSH2, OsMSH6, OsMSH4, OsMSH5
- Triticum aestivum TaMSH7-3D;Ph2
Sequences
cDNA Sequence
- >AT3G18524.1
CAAAATGGTAGGTGTCGTTAGCCCAGTAAGCCCAATATGAGAATTAATGGGCCTTGATATTTTATAGACCAAACATTGAAACATTGCACGCCTGGTCTCAAAGAACGTTAATACACGCGCCGCCGGTTGCCGCCAATCCGCTTTCCCGCCAAATTCGACACCATAAATTTCTTCTAGTCGCTTTCGATTCCAGTTCCACTGAAAAACCACGAAAGAAGAACATTTGCACCGTAGTTGCAGAAGGTAGGTGAAGGATTTAGCTTTCTCTATCTTCCAATGGAGGGTAATTTCGAGGAACAGAACAAGCTTCCGGAGCTGAAATTGGATGCAAAGCAAGCTCAAGGGTTTCTCTCGTTCTACAAAACCCTACCAAATGATACGAGAGCTGTTAGATTCTTTGATCGCAAGGATTATTATACAGCTCATGGTGAAAATTCAGTTTTCATTGCAAAGACTTATTATCATACAACCACTGCTCTACGTCAGCTCGGGAGTGGTTCAAATGCTCTTTCAAGCGTAAGCATTAGTAGGAACATGTTCGAAACGATTGCTAGGGATCTTCTCCTGGAGCGTAATGATCATACTGTAGAACTTTATGAGGGAAGCGGATCGAATTGGAGACTTGTGAAAACAGGTTCTCCTGGAAACATTGGAAGCTTTGAAGATGTTTTGTTTGCAAACAATGAAATGCAGGACACACCAGTTGTTGTCTCCATATTTCCAAGTTTTCACGATGGCAGATGCGTTATTGGGATGGCCTATGTTGATCTGACTAGGCGAGTTCTTGGACTAGCTGAGTTTCTTGATGATAGCCGCTTCACCAATCTGGAGTCTTCGTTGATTGCTCTAGGCGCAAAAGAATGCATTTTTCCAGCTGAATCCGGCAAATCCAATGAATGCAAAAGCCTGTATGATTCCCTGGAGAGGTGTGCCGTGATGATAACAGAGAGGAAGAAACACGAGTTCAAAGGAAGAGATTTAGATTCAGATCTTAAGAGATTGGTGAAGGGGAATATTGAGCCTGTTAGAGATTTGGTATCCGGGTTTGACCTTGCGACTCCTGCTCTAGGTGCATTACTCTCGTTTTCTGAACTTCTCTCAAATGAGGATAACTATGGGAACTTCACAATCCGCAGATATGATATTGGCGGATTCATGAGACTTGACTCTGCAGCTATGAGGGCTTTGAATGTGATGGAGAGCAAAACTGATGCTAATAAGAATTTCAGTTTGTTTGGTCTCATGAACAGAACATGTACCGCAGGGATGGGTAAGAGACTGCTTCATATGTGGCTGAAGCAACCCCTCGTGGATTTGAATGAGATTAAGACGAGATTAGATATAGTTCAGTGCTTTGTTGAAGAAGCTGGGTTAAGGCAGGATCTTAGACAGCATCTGAAGCGAATCTCAGATGTTGAGAGGCTTTTGCGCAGTCTCGAGAGAAGAAGAGGTGGGTTACAGCACATTATTAAACTCTATCAGTCAACTATAAGGCTTCCCTTCATCAAAACAGCTATGCAACAGTACACCGGAGAATTCGCATCACTCATCAGCGAGAGATACCTGAAAAAGCTTGAGGCTTTATCAGATCAAGATCACCTTGGAAAGTTCATCGATTTGGTTGAGTGCTCTGTAGATCTTGACCAGCTAGAAAATGGAGAATACATGATATCTTCAAGCTACGACACCAAATTGGCATCTCTGAAAGATCAGAAAGAATTGCTGGAGCAGCAGATTCACGAATTGCACAAAAAGACAGCGATAGAACTTGATCTTCAGGTCGACAAGGCTCTTAAACTTGACAAAGCAGCGCAATTTGGGCATGTCTTCAGGATCACGAAGAAGGAAGAGCCAAAGATCAGGAAGAAGCTGACGACACAGTTTATAGTGCTGGAGACTCGCAAAGACGGAGTGAAGTTCACAAACACAAAGCTAAAAAAACTGGGGGACCAGTACCAAAGTGTTGTGGATGATTATAGGAGCTGTCAAAAGGAGCTCGTTGATCGTGTAGTTGAGACTGTTACCAGCTTCTCTGAGGTATTTGAGGACTTAGCTGGGTTACTTTCTGAAATGGATGTTTTGTTAAGCTTTGCTGATTTGGCTGCCAGTTGCCCTACTCCATACTGTAGGCCAGAAATCACCTCTTCGGATGCTGGAGATATTGTACTAGAAGGAAGCAGACATCCATGTGTAGAAGCTCAAGATTGGGTGAATTTCATACCAAATGATTGCAGACTCATGAGAGGGAAGAGTTGGTTTCAAATAGTAACAGGGCCTAACATGGGAGGGAAGTCCACTTTCATCCGCCAGGTTGGTGTGATTGTGCTGATGGCTCAAGTTGGTTCCTTTGTTCCTTGTGATAAAGCATCAATTTCCATAAGAGACTGCATCTTTGCCCGTGTAGGAGCAGGCGATTGCCAACTGCGTGGAGTGTCAACTTTTATGCAAGAAATGCTTGAAACCGCATCGATATTGAAAGGCGCTAGTGATAAGTCACTGATAATTATCGATGAACTTGGTCGTGGAACATCAACTTATGATGGTTTTGGTTTAGCTTGGGCTATATGTGAGCATCTGGTTCAAGTGAAAAGAGCACCAACTCTGTTTGCTACTCACTTCCATGAACTTACTGCCTTGGCTCAAGCAAACTCTGAGGTCTCTGGTAACACTGTTGGTGTGGCAAACTTCCATGTCAGCGCTCACATTGACACTGAAAGCCGCAAACTCACCATGCTTTACAAGGTTGAACCAGGGGCCTGTGACCAGAGCTTTGGGATTCATGTGGCGGAATTTGCCAACTTCCCTGAAAGCGTCGTGGCCCTCGCAAGAGAGAAAGCTGCAGAGCTGGAAGATTTCTCTCCCTCCTCCATGATAATCAACAATGAGGAGAGTGGGAAGAGAAAGAGCAGAGAAGATGATCCAGATGAAGTATCAAGAGGGGCAGAGCGAGCTCACAAGTTTCTGAAAGAGTTTGCAGCGATACCACTTGATAAAATGGAGCTTAAAGATTCACTTCAACGGGTTCGTGAGATGAAAGATGAGCTAGAGAAAGATGCTGCAGACTGCCACTGGCTCAGGCAGTTTCTGTGAAGAACCCTTGACGTTTTTTGGTTTTTGGTTTTGTAAATAGCTTAAATCGGTTCTTGTAGTTGTGGTCGTTGCTTGGGATGAAACTAAATGAGGGCAAAAACATAATTCTACAATTTTTGTTAGTAAAGCTCGTTTAATTTACTCCCTAGTCTGATATAGATAGCTAACAATTATTTTGCCTATTATAATTGTTGATCAAGTACTTAGCTA
CDS Sequence
- >AT3G18524.1
ATGGAGGGTAATTTCGAGGAACAGAACAAGCTTCCGGAGCTGAAATTGGATGCAAAGCAAGCTCAAGGGTTTCTCTCGTTCTACAAAACCCTACCAAATGATACGAGAGCTGTTAGATTCTTTGATCGCAAGGATTATTATACAGCTCATGGTGAAAATTCAGTTTTCATTGCAAAGACTTATTATCATACAACCACTGCTCTACGTCAGCTCGGGAGTGGTTCAAATGCTCTTTCAAGCGTAAGCATTAGTAGGAACATGTTCGAAACGATTGCTAGGGATCTTCTCCTGGAGCGTAATGATCATACTGTAGAACTTTATGAGGGAAGCGGATCGAATTGGAGACTTGTGAAAACAGGTTCTCCTGGAAACATTGGAAGCTTTGAAGATGTTTTGTTTGCAAACAATGAAATGCAGGACACACCAGTTGTTGTCTCCATATTTCCAAGTTTTCACGATGGCAGATGCGTTATTGGGATGGCCTATGTTGATCTGACTAGGCGAGTTCTTGGACTAGCTGAGTTTCTTGATGATAGCCGCTTCACCAATCTGGAGTCTTCGTTGATTGCTCTAGGCGCAAAAGAATGCATTTTTCCAGCTGAATCCGGCAAATCCAATGAATGCAAAAGCCTGTATGATTCCCTGGAGAGGTGTGCCGTGATGATAACAGAGAGGAAGAAACACGAGTTCAAAGGAAGAGATTTAGATTCAGATCTTAAGAGATTGGTGAAGGGGAATATTGAGCCTGTTAGAGATTTGGTATCCGGGTTTGACCTTGCGACTCCTGCTCTAGGTGCATTACTCTCGTTTTCTGAACTTCTCTCAAATGAGGATAACTATGGGAACTTCACAATCCGCAGATATGATATTGGCGGATTCATGAGACTTGACTCTGCAGCTATGAGGGCTTTGAATGTGATGGAGAGCAAAACTGATGCTAATAAGAATTTCAGTTTGTTTGGTCTCATGAACAGAACATGTACCGCAGGGATGGGTAAGAGACTGCTTCATATGTGGCTGAAGCAACCCCTCGTGGATTTGAATGAGATTAAGACGAGATTAGATATAGTTCAGTGCTTTGTTGAAGAAGCTGGGTTAAGGCAGGATCTTAGACAGCATCTGAAGCGAATCTCAGATGTTGAGAGGCTTTTGCGCAGTCTCGAGAGAAGAAGAGGTGGGTTACAGCACATTATTAAACTCTATCAGTCAACTATAAGGCTTCCCTTCATCAAAACAGCTATGCAACAGTACACCGGAGAATTCGCATCACTCATCAGCGAGAGATACCTGAAAAAGCTTGAGGCTTTATCAGATCAAGATCACCTTGGAAAGTTCATCGATTTGGTTGAGTGCTCTGTAGATCTTGACCAGCTAGAAAATGGAGAATACATGATATCTTCAAGCTACGACACCAAATTGGCATCTCTGAAAGATCAGAAAGAATTGCTGGAGCAGCAGATTCACGAATTGCACAAAAAGACAGCGATAGAACTTGATCTTCAGGTCGACAAGGCTCTTAAACTTGACAAAGCAGCGCAATTTGGGCATGTCTTCAGGATCACGAAGAAGGAAGAGCCAAAGATCAGGAAGAAGCTGACGACACAGTTTATAGTGCTGGAGACTCGCAAAGACGGAGTGAAGTTCACAAACACAAAGCTAAAAAAACTGGGGGACCAGTACCAAAGTGTTGTGGATGATTATAGGAGCTGTCAAAAGGAGCTCGTTGATCGTGTAGTTGAGACTGTTACCAGCTTCTCTGAGGTATTTGAGGACTTAGCTGGGTTACTTTCTGAAATGGATGTTTTGTTAAGCTTTGCTGATTTGGCTGCCAGTTGCCCTACTCCATACTGTAGGCCAGAAATCACCTCTTCGGATGCTGGAGATATTGTACTAGAAGGAAGCAGACATCCATGTGTAGAAGCTCAAGATTGGGTGAATTTCATACCAAATGATTGCAGACTCATGAGAGGGAAGAGTTGGTTTCAAATAGTAACAGGGCCTAACATGGGAGGGAAGTCCACTTTCATCCGCCAGGTTGGTGTGATTGTGCTGATGGCTCAAGTTGGTTCCTTTGTTCCTTGTGATAAAGCATCAATTTCCATAAGAGACTGCATCTTTGCCCGTGTAGGAGCAGGCGATTGCCAACTGCGTGGAGTGTCAACTTTTATGCAAGAAATGCTTGAAACCGCATCGATATTGAAAGGCGCTAGTGATAAGTCACTGATAATTATCGATGAACTTGGTCGTGGAACATCAACTTATGATGGTTTTGGTTTAGCTTGGGCTATATGTGAGCATCTGGTTCAAGTGAAAAGAGCACCAACTCTGTTTGCTACTCACTTCCATGAACTTACTGCCTTGGCTCAAGCAAACTCTGAGGTCTCTGGTAACACTGTTGGTGTGGCAAACTTCCATGTCAGCGCTCACATTGACACTGAAAGCCGCAAACTCACCATGCTTTACAAGGTTGAACCAGGGGCCTGTGACCAGAGCTTTGGGATTCATGTGGCGGAATTTGCCAACTTCCCTGAAAGCGTCGTGGCCCTCGCAAGAGAGAAAGCTGCAGAGCTGGAAGATTTCTCTCCCTCCTCCATGATAATCAACAATGAGGAGAGTGGGAAGAGAAAGAGCAGAGAAGATGATCCAGATGAAGTATCAAGAGGGGCAGAGCGAGCTCACAAGTTTCTGAAAGAGTTTGCAGCGATACCACTTGATAAAATGGAGCTTAAAGATTCACTTCAACGGGTTCGTGAGATGAAAGATGAGCTAGAGAAAGATGCTGCAGACTGCCACTGGCTCAGGCAGTTTCTGTGA
Protein Sequence
- >AT3G18524.1
MEGNFEEQNKLPELKLDAKQAQGFLSFYKTLPNDTRAVRFFDRKDYYTAHGENSVFIAKTYYHTTTALRQLGSGSNALSSVSISRNMFETIARDLLLERNDHTVELYEGSGSNWRLVKTGSPGNIGSFEDVLFANNEMQDTPVVVSIFPSFHDGRCVIGMAYVDLTRRVLGLAEFLDDSRFTNLESSLIALGAKECIFPAESGKSNECKSLYDSLERCAVMITERKKHEFKGRDLDSDLKRLVKGNIEPVRDLVSGFDLATPALGALLSFSELLSNEDNYGNFTIRRYDIGGFMRLDSAAMRALNVMESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLVDLNEIKTRLDIVQCFVEEAGLRQDLRQHLKRISDVERLLRSLERRRGGLQHIIKLYQSTIRLPFIKTAMQQYTGEFASLISERYLKKLEALSDQDHLGKFIDLVECSVDLDQLENGEYMISSSYDTKLASLKDQKELLEQQIHELHKKTAIELDLQVDKALKLDKAAQFGHVFRITKKEEPKIRKKLTTQFIVLETRKDGVKFTNTKLKKLGDQYQSVVDDYRSCQKELVDRVVETVTSFSEVFEDLAGLLSEMDVLLSFADLAASCPTPYCRPEITSSDAGDIVLEGSRHPCVEAQDWVNFIPNDCRLMRGKSWFQIVTGPNMGGKSTFIRQVGVIVLMAQVGSFVPCDKASISIRDCIFARVGAGDCQLRGVSTFMQEMLETASILKGASDKSLIIIDELGRGTSTYDGFGLAWAICEHLVQVKRAPTLFATHFHELTALAQANSEVSGNTVGVANFHVSAHIDTESRKLTMLYKVEPGACDQSFGIHVAEFANFPESVVALAREKAAELEDFSPSSMIINNEESGKRKSREDDPDEVSRGAERAHKFLKEFAAIPLDKMELKDSLQRVREMKDELEKDAADCHWLRQFL