Information report for AT3G18390
Gene Details
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Functional Descriptions
- GO:0009793 — acts upstream of or within — embryo development ending in seed dormancy
- GO:0003729 — enables — mRNA binding
- CS16036 — embryo defective; developmental arrest of mutant embryos
Functional Keywords
Literature and News
- Inactivation of the chloroplast ATP synthase gamma subunit results in high non-photochemical fluorescence quenching and altered nuclear gene expression in Arabidopsis thaliana. DOI: 10.1074/jbc.M308435200 ; PMID: 14576160
- Identification of genes required for embryo development in Arabidopsis. DOI: 10.1104/pp.104.045179 ; PMID: 15266054
- A 125 kDa RNase E/G-like protein is present in plastids and is essential for chloroplast development and autotrophic growth in Arabidopsis. DOI: 10.1093/jxb/ern126 ; PMID: 18515828
- Global analysis of Arabidopsis gene expression uncovers a complex array of changes impacting pathogen response and cell cycle during geminivirus infection. DOI: 10.1104/pp.108.121038 ; PMID: 18650403
- In planta changes in protein phosphorylation induced by the plant hormone abscisic acid. DOI: 10.1073/pnas.1007879107 ; PMID: 20733066
- Identification of nuclear genes encoding chloroplast-localized proteins required for embryo development in Arabidopsis. DOI: 10.1104/pp.110.168120 ; PMID: 21139083
- Genome-wide identification of EMBRYO-DEFECTIVE (EMB) genes required for growth and development in Arabidopsis. DOI: 10.1111/nph.16071 ; PMID: 31334862
- Discovering the RNA-Binding Proteome of Plant Leaves with an Improved RNA Interactome Capture Method. DOI: 10.3390/biom10040661 ; PMID: 32344669
- Sorting signals, N-terminal modifications and abundance of the chloroplast proteome. DOI: 10.1371/journal.pone.0001994 ; PMID: 18431481
Gene Resources
- UniProt: Q9LS51
- EMBL: AB026658, AY063908, CP002686
- AlphaFoldDB: Q9LS51
- EnsemblPlants: AT3G18390.1
- Gramene: AT3G18390.1
- KEGG: ath:AT3G18390
- Orthologous matrix: DKEMITD
- ExpressionAtlas: AT3G18390
- InterPro: IPR001890, IPR035920, IPR045278
- PANTHER: PTHR31846, PTHR31846:SF4
- SUPFAM: SSF75471
- PROSITE: PS51295
- Gene3D: 3.30.110.60
- OrthoDB: Q9LS51
- SWISS-MODEL: Q9LS51
Homologs
- Actinidia chinensis Achn089081
- Brachypodium distachyon Bradi4g28800.2.p
- Brassica napus BnaA04G0045000ZS
- Brassica oleracea Bo7g085700
- Daucus carota DCAR_021729
- Malus domestica MDP0000263830
- Oryza sativa OsCFM3, AL2, OsCFM2, OsCAF2, OsCAF1
- Prunus avium Pav_sc0000040.1_g510.1.mk
- Pyrus bretschneideri Pbr012547.2, Pbr014522.2
- Triticum aestivum Traes_5DL_519330E98.2
Sequences
cDNA Sequence
- >AT3G18390.1
CAGCTTATCCGCCTGAAACTTATTTCTCAGTATCCAAAACGATGGCGAAGAAGACACTTCGCTGAAGCTTTTTTTTCCAAAAAAATTTCTTAGTGTCGTCAATGGCTTTGGCTCCACTTAATTTTACGGAAATGCCACTGAGAAGCTCTCTTCCTCTGACCTCTAGCTCTCGCTATTGTTCCTCTCCTTCGCTTCACGCATTGCTCTTCTATTCGTTGGGTGTGAAACCCTCGCGTCAACAAATTGTTCGGCCATTCTCTTCGCTGCGTACAAGCGAGCGTAGCAACAACAGGAGCAATAACAATCGTCGATTAGATCAACGTAATCATAAACCTACTCCTCCTTGGATAGATAAGTGGCCTCCGTCATCCTCCGGAGCTGGCGGTGATCATGCCGGGAAGAAAGGTGGTGAAAACAACGGCGGAGATAGAATTCGGTCTGCGGAGGAGGAAGCGGAAGCGAAACTTCGGTATTTGGAGAAGGATAAAGGACAAAACGCGATTGAGAGGATTGTTCTTCGGCTACGGAATTTAGGATTAGGTTCGGATGATGAGGACGATGTGGAAGATGACGAGGGAGGTGGAATTAACGGCGGAGATGTGAAGCCGGTGACTGGAGAAGAGAGATTGGGGGATTTGTTGAAGAGAGAGTGGGTGAGACCTGATATGATGCTTGCTGAGGGAGAAGAGAGTGAGGAAGAGGATGAGGTATTATTGCCATGGGAGAAAAATGAGGAAGAGCAGGCGGCGGAGAGAGTAGTAGGAGAAGGAGGAGTGGCGGTGATGCAGAAGAGGAGAGCTAGAGCTCCATCACTGGCGGAGCTCACCGTTGAGGATTCTGAGTTACGGCGGTTAAGGAGGGATGGAATGTATCTGAGGGTTAGGATCAATATACCAAAAGCTGGGCTAACGCAGGCAGTGATGGAGAAGATTTATGATACTTGGAGGAAAGAAGAGCTTGTGAGGCTAAAGTTCCACGAAGTGCTTGCTCGTGACATGAAGACGGCCCATGAGATTGTTGAGCGTCGAACTGGTGGAATGGTGATATGGAGGGCCGGAAGTGTAATGGTGGTTTATCGTGGACTTGACTATAAAGGACCTCCTGTGATCTCTAATCAAATGGCCGGTCCTAAAGAGACTCTTTTTGTCCCAGATGTATCTTCTGCTGGCGATGAAGCAACAAATGCCAAAGATAACCAAAGTGCACCTTTGGTAATCAAAGATCCGATCATCAAGAACCCTATTCGCAAAGAGAATATGACAGAAGAAGAAGTTGAATTTAACAGTCTATTAGACAGCTTAGGTCCACGTTTTCAAGAGTGGTGGGGTACTGGGGTACTACCTGTGGACGCTGACTTACTACCTCCTACAATTCCTGGTTATAAAACACCTTTCAGGCTTCTTCCTACTGGGATGAGATCAAATTTGACCAATGCCGAAATGACAAATCTCAGGAAGATTGGTAAAACTCTCCCATGCCATTTTGCTCTTGGTAGGAACAGAAATCACCAAGGATTGGCAGCTGCAATACTCCAGATCTGGGAGAAAAGTCTAATTGCAAAGATCGCTGTGAAGCGAGGTATCCAGAATACAAATAACAAACTAATGGCGGATGAAGTGAAGACATTGACAGGGGGTGTCTTGCTGCTCAGAAATAAGTATTACATTGTAATATATCGTGGGAAGGACTTCCTTCCTTCAAGTGTGGCAGCTACTTTAGCAGAAAGACAAGAATTAACGAAAGAGATTCAAGATGTCGAAGAGAGGGTAAGAAATCGTGAGATTGAGGCTGTTCAGCCTGTTGGTGACAAAGTACCAGCAGAAGCTGGCACTCTGGCCGAGTTTTATGAGGCTCAAGCCCGATGGGGGAAGGAAATAACTCCAGACCATCGTGAAAAGATGATTGAAGAAGCTTCAAGGGTTGCAAATGCTAGAGTTGTTAAACGAATACAACACAAACTAAACCTTGCCCAATCGAAGTTTCAAAGAGCAGAGAAACTGTTGTCCAAAATAGAAGCCTCTATGATTCCAAATGGACCTGATTATGATCAAGAGGTCATCTCCGAGGAAGAAAGAGCTATGTTCCGGAAAGTGGGACTGAAAATGAAGGCATACTTACCCATAGGTATCCGTGGTGTATTTGATGGAGTCATTGAGAACATGCATCTGCATTGGAAACACAGAGAATTGGTGAAGCTTATATCAAAACAGAAGAACCAAGCATTTGTTGAGGAGACAGCCCGGTTACTAGAATACGAGAGTGGTGGAGTTCTTGTGGCAATAGAAAAGGTTCCTAAAGGATTTGCGCTTATTTATTACCGTGGGAAGAATTACAGGAGACCCATTAGCTTGAGACCAAGGAATCTTCTGACAAAAGCAAAAGCATTGAAACGTTCCATTGCAATGCAACGCCACGAGGCACTTAGTCAGCATATTTCTGAACTGGAGAGAACAATAGAGCAAATGCAAAGCCAACTCACTTCGAAAAACCCGTCATACAGTGAATCAGAATGGGAGAACGATGAGGATGATGATGATGATGAAGAAGAAGAGAAAGATGATGTGGAGGATAATGAGAGTGATTGGGATGAAACTGATGGCGAATCTGCAATTTCTAGTATCGAAGAAGCTGATATGTCATCGCGCTAAGCTGATAAAGTTTTTAACACAGAGATTGTCCTATCTCAGGAGGTTGAAGCTGACAATGATGTCAGAGGAATGGTTCTGGTTCTGGTTCTGTCTATCCAGTGGTGGTAAAAGAAAAGCAAGTGATGATTCATCATCAACGTGGGTAAGGTTTAAGTTTCCTGTCGCAGAGATTACAGAATCTACGAGCTCAGAAAGCAGAACCTATCTGTATTTCAGGGGAGAAAAAAATAAGCATCTATAGTTTATATACATTGTAAGTTTTGCCAATGTATCATTATTAAAAAATATATATATATCAATTAACATTCAACAAATTGTAAATTAGTTCTACTACCTTTGCTTAAGTTCTGGCAGCAATTGTGATCTGAAATTCTGAACAACTAGTAAATTCTGGTGAACATTAGTTTACCAATGCATATTACTTTGTTCGGTCTAGCGATTACATGATCCTACGATTATTCGCATTTAAAAGATTGGC
CDS Sequence
- >AT3G18390.1
ATGGCTTTGGCTCCACTTAATTTTACGGAAATGCCACTGAGAAGCTCTCTTCCTCTGACCTCTAGCTCTCGCTATTGTTCCTCTCCTTCGCTTCACGCATTGCTCTTCTATTCGTTGGGTGTGAAACCCTCGCGTCAACAAATTGTTCGGCCATTCTCTTCGCTGCGTACAAGCGAGCGTAGCAACAACAGGAGCAATAACAATCGTCGATTAGATCAACGTAATCATAAACCTACTCCTCCTTGGATAGATAAGTGGCCTCCGTCATCCTCCGGAGCTGGCGGTGATCATGCCGGGAAGAAAGGTGGTGAAAACAACGGCGGAGATAGAATTCGGTCTGCGGAGGAGGAAGCGGAAGCGAAACTTCGGTATTTGGAGAAGGATAAAGGACAAAACGCGATTGAGAGGATTGTTCTTCGGCTACGGAATTTAGGATTAGGTTCGGATGATGAGGACGATGTGGAAGATGACGAGGGAGGTGGAATTAACGGCGGAGATGTGAAGCCGGTGACTGGAGAAGAGAGATTGGGGGATTTGTTGAAGAGAGAGTGGGTGAGACCTGATATGATGCTTGCTGAGGGAGAAGAGAGTGAGGAAGAGGATGAGGTATTATTGCCATGGGAGAAAAATGAGGAAGAGCAGGCGGCGGAGAGAGTAGTAGGAGAAGGAGGAGTGGCGGTGATGCAGAAGAGGAGAGCTAGAGCTCCATCACTGGCGGAGCTCACCGTTGAGGATTCTGAGTTACGGCGGTTAAGGAGGGATGGAATGTATCTGAGGGTTAGGATCAATATACCAAAAGCTGGGCTAACGCAGGCAGTGATGGAGAAGATTTATGATACTTGGAGGAAAGAAGAGCTTGTGAGGCTAAAGTTCCACGAAGTGCTTGCTCGTGACATGAAGACGGCCCATGAGATTGTTGAGCGTCGAACTGGTGGAATGGTGATATGGAGGGCCGGAAGTGTAATGGTGGTTTATCGTGGACTTGACTATAAAGGACCTCCTGTGATCTCTAATCAAATGGCCGGTCCTAAAGAGACTCTTTTTGTCCCAGATGTATCTTCTGCTGGCGATGAAGCAACAAATGCCAAAGATAACCAAAGTGCACCTTTGGTAATCAAAGATCCGATCATCAAGAACCCTATTCGCAAAGAGAATATGACAGAAGAAGAAGTTGAATTTAACAGTCTATTAGACAGCTTAGGTCCACGTTTTCAAGAGTGGTGGGGTACTGGGGTACTACCTGTGGACGCTGACTTACTACCTCCTACAATTCCTGGTTATAAAACACCTTTCAGGCTTCTTCCTACTGGGATGAGATCAAATTTGACCAATGCCGAAATGACAAATCTCAGGAAGATTGGTAAAACTCTCCCATGCCATTTTGCTCTTGGTAGGAACAGAAATCACCAAGGATTGGCAGCTGCAATACTCCAGATCTGGGAGAAAAGTCTAATTGCAAAGATCGCTGTGAAGCGAGGTATCCAGAATACAAATAACAAACTAATGGCGGATGAAGTGAAGACATTGACAGGGGGTGTCTTGCTGCTCAGAAATAAGTATTACATTGTAATATATCGTGGGAAGGACTTCCTTCCTTCAAGTGTGGCAGCTACTTTAGCAGAAAGACAAGAATTAACGAAAGAGATTCAAGATGTCGAAGAGAGGGTAAGAAATCGTGAGATTGAGGCTGTTCAGCCTGTTGGTGACAAAGTACCAGCAGAAGCTGGCACTCTGGCCGAGTTTTATGAGGCTCAAGCCCGATGGGGGAAGGAAATAACTCCAGACCATCGTGAAAAGATGATTGAAGAAGCTTCAAGGGTTGCAAATGCTAGAGTTGTTAAACGAATACAACACAAACTAAACCTTGCCCAATCGAAGTTTCAAAGAGCAGAGAAACTGTTGTCCAAAATAGAAGCCTCTATGATTCCAAATGGACCTGATTATGATCAAGAGGTCATCTCCGAGGAAGAAAGAGCTATGTTCCGGAAAGTGGGACTGAAAATGAAGGCATACTTACCCATAGGTATCCGTGGTGTATTTGATGGAGTCATTGAGAACATGCATCTGCATTGGAAACACAGAGAATTGGTGAAGCTTATATCAAAACAGAAGAACCAAGCATTTGTTGAGGAGACAGCCCGGTTACTAGAATACGAGAGTGGTGGAGTTCTTGTGGCAATAGAAAAGGTTCCTAAAGGATTTGCGCTTATTTATTACCGTGGGAAGAATTACAGGAGACCCATTAGCTTGAGACCAAGGAATCTTCTGACAAAAGCAAAAGCATTGAAACGTTCCATTGCAATGCAACGCCACGAGGCACTTAGTCAGCATATTTCTGAACTGGAGAGAACAATAGAGCAAATGCAAAGCCAACTCACTTCGAAAAACCCGTCATACAGTGAATCAGAATGGGAGAACGATGAGGATGATGATGATGATGAAGAAGAAGAGAAAGATGATGTGGAGGATAATGAGAGTGATTGGGATGAAACTGATGGCGAATCTGCAATTTCTAGTATCGAAGAAGCTGATATGTCATCGCGCTAA
Protein Sequence
- >AT3G18390.1
MALAPLNFTEMPLRSSLPLTSSSRYCSSPSLHALLFYSLGVKPSRQQIVRPFSSLRTSERSNNRSNNNRRLDQRNHKPTPPWIDKWPPSSSGAGGDHAGKKGGENNGGDRIRSAEEEAEAKLRYLEKDKGQNAIERIVLRLRNLGLGSDDEDDVEDDEGGGINGGDVKPVTGEERLGDLLKREWVRPDMMLAEGEESEEEDEVLLPWEKNEEEQAAERVVGEGGVAVMQKRRARAPSLAELTVEDSELRRLRRDGMYLRVRINIPKAGLTQAVMEKIYDTWRKEELVRLKFHEVLARDMKTAHEIVERRTGGMVIWRAGSVMVVYRGLDYKGPPVISNQMAGPKETLFVPDVSSAGDEATNAKDNQSAPLVIKDPIIKNPIRKENMTEEEVEFNSLLDSLGPRFQEWWGTGVLPVDADLLPPTIPGYKTPFRLLPTGMRSNLTNAEMTNLRKIGKTLPCHFALGRNRNHQGLAAAILQIWEKSLIAKIAVKRGIQNTNNKLMADEVKTLTGGVLLLRNKYYIVIYRGKDFLPSSVAATLAERQELTKEIQDVEERVRNREIEAVQPVGDKVPAEAGTLAEFYEAQARWGKEITPDHREKMIEEASRVANARVVKRIQHKLNLAQSKFQRAEKLLSKIEASMIPNGPDYDQEVISEEERAMFRKVGLKMKAYLPIGIRGVFDGVIENMHLHWKHRELVKLISKQKNQAFVEETARLLEYESGGVLVAIEKVPKGFALIYYRGKNYRRPISLRPRNLLTKAKALKRSIAMQRHEALSQHISELERTIEQMQSQLTSKNPSYSESEWENDEDDDDDEEEEKDDVEDNESDWDETDGESAISSIEEADMSSR