Gene Details:

• Gene ID: AT3G18090
• Gene Symbol: NRPD2B
• Gene Name: nuclear RNA polymerase D2B
• Description: nuclear RNA polymerase D2B;(source:Araport11)
• TAIR Accession: locus:2092682
• Genome: Araport11_genome_release
• Species: Arabidopsis thaliana

Transcripts:

• AT3G18090.1     AT3G18090.2     AT3G18090.3

Gene Ontology:

• GO:0005665  — part of — RNA polymerase II, core complex
• GO:0005634  — located in — nucleus
• GO:0006351  — involved in — DNA-templated transcription
• GO:0003899  — enables — DNA-directed 5-3 RNA polymerase activity
• GO:0001055  — contributes to — RNA polymerase II activity
• GO:0000418  — part of — RNA polymerase IV complex
• GO:0000419  — part of — RNA polymerase V complex
• GO:0003677  — enables — DNA binding
• GO:0032549  — enables — ribonucleoside binding

Germplasm Phenotype:

• CS66155  — Late flowering under short day conditions
• CS66160  — No visible phenotype.
• CS66161  — Late flowering, defects in the RNA-directed DNA methylation pathway
• nrpd2b-1  — Defective in non-CG methylation

Literature:

• Nuclear genes that encode mitochondrial proteins for DNA and RNA metabolism are clustered in the Arabidopsis genome.   DOI:  10.1105/tpc.010009 ;  PMID:  12837951
• RNA polymerase IV directs silencing of endogenous DNA.   DOI:  10.1126/science.1106910 ;  PMID:  15692015
• Atypical RNA polymerase subunits required for RNA-directed DNA methylation.   DOI:  10.1038/ng1580 ;  PMID:  15924141
• Reinforcement of silencing at transposons and highly repeated sequences requires the concerted action of two distinct RNA polymerases IV in Arabidopsis.   DOI:  10.1101/gad.348405 ;  PMID:  16140984
• Membrane proteomic analysis of Arabidopsis thaliana using alternative solubilization techniques.   DOI:  10.1021/pr060525b ;  PMID:  17432890
• Herbivory in the previous generation primes plants for enhanced insect resistance.   DOI:  10.1104/pp.111.187831 ;  PMID:  22209873
• RNA polymerase IV directs silencing of endogenous DNA.   DOI:  10.1126/science.1106910 ;  PMID:  15692015
• Membrane proteomic analysis of Arabidopsis thaliana using alternative solubilization techniques.   DOI:  10.1021/pr060525b ;  PMID:  17432890

Sequences: