Information report for AT3G17970
Gene Details
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Functional Descriptions
- PO:0000014 — rosette leaf — hoja en roseta (Spanish, exact), ロゼット葉 (Japanese, exact)
- PO:0000056 — flower bud — floral bud (exact), yema floral (Spanish, exact), 花芽 (Japanese, exact)
- PO:0009005 — root — raíz (Spanish, exact), radices (exact, plural), radix (exact), 根 (Japanese, exact), aerial root (narrow), climbing root (narrow)
- GO:0048316 — acts upstream of or within — seed development
- GO:0009941 — located in — chloroplast envelope
- GO:0009707 — located in — chloroplast outer membrane
- GO:0009507 — located in — chloroplast
- GO:0009536 — located in — plastid
- GO:0005829 — located in — cytosol
- SALK_087076C — No differences in expression intensity, relative to wild type, could be detected.
- toc64-III-1 — No visible phenotype.
- toc64-III-1 toc64-I — No visible phenotype.
- toc64-III-1 toc64-V — No visible phenotype.
- toc64-III-1 toc64-V toc64-I — No visible phenotype.
- toc64-III-2 — No visible phenotype.
Functional Keywords
Literature and News
- DNA array analyses of Arabidopsis thaliana lacking a vacuolar Na+/H+ antiporter: impact of AtNHX1 on gene expression. DOI: 10.1111/j.1365-313X.2004.02253.x ; PMID: 15546358
- Subcellular localization and tissue specific expression of amidase 1 from Arabidopsis thaliana. DOI: 10.1007/s00425-006-0304-2 ; PMID: 16738862
- Impact of AtNHX1, a vacuolar Na+/H+ antiporter, upon gene expression during and long-term salt stress in Arabidopsis thaliana. DOI: 10.1186/1471-2229-7-18 ; PMID: 17411438
- Toc64/OEP64 is not essential for the efficient import of proteins into chloroplasts in Arabidopsis thaliana. DOI: 10.1111/j.1365-313X.2007.03207.x ; PMID: 17655652
- Targeting of nucleus-encoded proteins to chloroplasts in plants. DOI: 10.1111/j.1469-8137.2008.02452.x ; PMID: 19086173
- In silico identification of carboxylate clamp type tetratricopeptide repeat proteins in Arabidopsis and rice as putative co-chaperones of Hsp90/Hsp70. DOI: 10.1371/journal.pone.0012761 ; PMID: 20856808
- Toc33 and Toc64-III cooperate in precursor protein import into the chloroplasts of Arabidopsis thaliana. DOI: 10.1111/pce.12030 ; PMID: 23131143
- AKR2A-mediated import of chloroplast outer membrane proteins is essential for chloroplast biogenesis. DOI: 10.1038/ncb1683 ; PMID: 18193034
- Sorting signals, N-terminal modifications and abundance of the chloroplast proteome. DOI: 10.1371/journal.pone.0001994 ; PMID: 18431481
Gene Resources
- UniProt: A0A1I9LL70
- EMBL: CP002686
- AlphaFoldDB: A0A1I9LL70
- EnsemblPlants: AT3G17970.2
- Gramene: AT3G17970.2
- Orthologous matrix: QSANLWV
- ExpressionAtlas: AT3G17970
- InterPro: IPR011990, IPR019734, IPR023631
- PANTHER: PTHR46310, PTHR46310:SF5
- SUPFAM: SSF48452, SSF75304
- Gene3D: 1.25.40.10, 3.90.1300.10
- OrthoDB: A0A1I9LL70
- SWISS-MODEL: A0A1I9LL70
Homologs
- Brassica napus BnaC03G0531700ZS
- Brassica oleracea Bo3g101300, Bo2g166250
- Brassica rapa Bra031917
- Capsicum annuum T459_31913
- Glycine max Glyma.15G060700
- Medicago truncatula Medtr2g010180
- Nicotiana attenuata A4A49_35406, A4A49_39772
- Oryza sativa OM64
- Raphanus raphanistrum RrC4630_p2
- Rosa chinensis RchiOBHm_Chr6g0269381
- Solanum lycopersicum Solyc01g106340.3, Solyc01g106330.3
- Solanum tuberosum PGSC0003DMG400003120
Sequences
cDNA Sequence
- >AT3G17970.2
TCTTTGGCGTCCTTCTCCTTAGGGTCTATCTCTCTTATCTTAAGCAGCAGCAGCAGCAGCTAGAACAAAAACGTCACCGATGGCGTCTCAAGCTGCGAATCTCTGGGTTCTTCTAGGTTTAGGTCTCGCTGGGATTCTTATGCTTACCAAAAAGCTGAAGAAGACCGTCCGTGAAGATTTCGGCGCTTTTATCGATAAACTCATGCTTCTTCCCCCTCCGCAACCTGCTCCTCCCAAAGCTCCTCATCCTCTCACCGGTCTAACCTTTGCCGTTTCCGACGTATTCGATATTACAGGGTATGTGACTGGATTTGGTCATCCAGACTGGGTCAGGACCCATGAAGCTGCTTCGTCAACATCTCCTGTGGTTTCAACTCTCGTTGAAGGTGGAGCCACTTGTGTTGGAAAAACTGTAGTTGATGAGTTTGCGTTTAGTATTAGTGGAGAAAACAAGCATTACGATTCACCTACAAATCCTGCAGCTCCTACTCGTATTCCTGGTGGCGCTTGCAGTGGAGCTGCTGTAGCCGTAGCAACAAATGCTGTGGATTTTGCTCTAGGCATCGACACAGTTGGCGGGGTAAGAGTGCCTGCTGGATACTGTGGCGTTCTTGGATTCAAATCTTCTTATGGGGCTATTTCAAACACCGGAATCATACCAGTATCTTCAAGTCTTGACTCTGTTGGATGGTTTGCCCGCGATCCAAACACCCTACGTCGTGTTGGCCATGTACTCTTGCAACTTCCATTTGCCACTCAACGGAATCCAAGGCAAATCATACTAGCTGATGACTGTTTTCAGCTGTTAAAGATCCCTGTGGATCGGATTACCCAGGTGGTGACCAAATCAGCTGAAAAGCTTTTTGGAAGACAATTGCTAAAGCATCAGAACTTGGAGACCTATTTTGAAACTAAAGTTCCTAGCTTGAAAGAGTTCGCTAGGACAAAAGCCATTGCTAACACGAAGGTCTCAACATCGAGACTACTGGCGAATGTGATGCAGCTCCTTCAAAGGCACGAGTTCCTTCAAAATCATGGGGATTGGATCAACACAGTGAAGCCAGCCATTGATCCTGTGATTTTATCACAAGTGTGTGAGAACCCAGAACTAACCAATGAAGAGACTGAGAACCTGAATGCTATCAGAAACGAGACTCGAGTGGCTATTGGTTCACTTCTCAAGGATGATGGCATTCTGGTAATTCCAACATTGCCAGCTGTTCCTCCAAAACTTGGTAGCAAGGAGATAACATCTGAAGACTATCAAAACCGAGCTTCAAGTCTGCTTAGCATTGCTAGCATATCAGGATGTTGTCAGGTGACTGTGCCACTCGGACATCATGAGAAATGCCCTATTTCAGTTTCTTTCATAGGAAGACACGGTGGTGACCGCTTTTTACTAGATACAGTGCAGACAATGTATCCATCTTTGCAAGAGTACTCGAGTATTGTTACCGATCCCAAATCTTCTAAAAAGGCTATCACCAAAGAAGAGTCAGCCGAGATTGCCAAAGAGAAGGGTAACCAAGCGTTCAAAGAGAAACTATGGCAGAAAGCTATTGGTCTATACTCAGAAGCTATAAAGCTAAGTGACAACAATGCTACCTATTACAGTAACAGAGCTGCTGCATATCTTGAACTTGGAGGCTTTCTTCAAGCCGAAGAAGACTGTACCAAAGCCATCACCCTCGACAAGAAGGTAACTTTCATTAAAACACAGAAACAGGTTTCTCTTGAAAAAAAAACACTCTTTACTTTGTAAGAACACACAACACAAAGATCGTTTTTGATTTCTTTCAGAATGTTAAAGCCTATTTACGAAGAGGAACCGCAAGAGAAATGTTAGGCGATTGCAAGGGAGCCATAGAAGATTTCAGATACGCACTTGTGCTGGAACCAAACAACAAACGAGCGTCTCTCTCAGCAGAGAGACTGAGAAAATTCCAGTGAGCTTCTTTTGTCCGTACCTCACCGATCATTGAGAAAACGTTTGTTCCTTAGAATTTGTCCAAGAGTATAGGCCAATTTTGTCAACACTTGTCTTTTGCGTCTGATATTTAGGCATTTTATCTAGAGATACCTTTTGCAAGTCCGCCGAGAATGGAAAATTATAATATCCGATGTTTATTTTAAACGTTCTCTAAAATTGGATATCAAAAAGTAATGTTAATCTT - >AT3G17970.1
TCTTTGGCGTCCTTCTCCTTAGGGTCTATCTCTCTTATCTTAAGCAGCAGCAGCAGCAGCTAGAACAAAAACGTCACCGATGGCGTCTCAAGCTGCGAATCTCTGGGTTCTTCTAGGTTTAGGTCTCGCTGGGATTCTTATGCTTACCAAAAAGCTGAAGAAGACCGTCCGTGAAGATTTCGGCGCTTTTATCGATAAACTCATGCTTCTTCCCCCTCCGCAACCTGCTCCTCCCAAAGCTCCTCATCCTCTCACCGGTCTAACCTTTGCCGTTTCCGACGTATTCGATATTACAGGGTATGTGACTGGATTTGGTCATCCAGACTGGGTCAGGACCCATGAAGCTGCTTCGTCAACATCTCCTGTGGTTTCAACTCTCGTTGAAGGTGGAGCCACTTGTGTTGGAAAAACTGTAGTTGATGAGTTTGCGTTTAGTATTAGTGGAGAAAACAAGCATTACGATTCACCTACAAATCCTGCAGCTCCTACTCGTATTCCTGGTGGCGCTTGCAGTGGAGCTGCTGTAGCCGTAGCAACAAATGCTGTGGATTTTGCTCTAGGCATCGACACAGTTGGCGGGGTAAGAGTGCCTGCTGGATACTGTGGCGTTCTTGGATTCAAATCTTCTTATGGGGCTATTTCAAACACCGGAATCATACCAGTATCTTCAAGTCTTGACTCTGTTGGATGGTTTGCCCGCGATCCAAACACCCTACGTCGTGTTGGCCATGTACTCTTGCAACTTCCATTTGCCACTCAACGGAATCCAAGGCAAATCATACTAGCTGATGACTGTTTTCAGCTGTTAAAGATCCCTGTGGATCGGATTACCCAGGTGGTGACCAAATCAGCTGAAAAGCTTTTTGGAAGACAATTGCTAAAGCATCAGAACTTGGAGACCTATTTTGAAACTAAAGTTCCTAGCTTGAAAGAGTTCGCTAGGACAAAAGCCATTGCTAACACGAAGGTCTCAACATCGAGACTACTGGCGAATGTGATGCAGCTCCTTCAAAGGCACGAGTTCCTTCAAAATCATGGGGATTGGATCAACACAGTGAAGCCAGCCATTGATCCTGTGATTTTATCACAAGTGTGTGAGAACCCAGAACTAACCAATGAAGAGACTGAGAACCTGAATGCTATCAGAAACGAGACTCGAGTGGCTATTGGTTCACTTCTCAAGGATGATGGCATTCTGGTAATTCCAACATTGCCAGCTGTTCCTCCAAAACTTGGTAGCAAGGAGATAACATCTGAAGACTATCAAAACCGAGCTTCAAGTCTGCTTAGCATTGCTAGCATATCAGGATGTTGTCAGGTGACTGTGCCACTCGGACATCATGAGAAATGCCCTATTTCAGTTTCTTTCATAGGAAGACACGGTGGTGACCGCTTTTTACTAGATACAGTGCAGACAATGTATCCATCTTTGCAAGAGTACTCGAGTATTGTTACCGATCCCAAATCTTCTAAAAAGGCTATCACCAAAGAAGAGTCAGCCGAGATTGCCAAAGAGAAGGGTAACCAAGCGTTCAAAGAGAAACTATGGCAGAAAGCTATTGGTCTATACTCAGAAGCTATAAAGCTAAGTGACAACAATGCTACCTATTACAGTAACAGAGCTGCTGCATATCTTGAACTTGGAGGCTTTCTTCAAGCCGAAGAAGACTGTACCAAAGCCATCACCCTCGACAAGAAGGTAACTTTCATTAAAACACAGAAACAGGTTTCTCTTGAAAAAAAAACACTCTTTACTTTGTAAGAACACACAACACAAAGATCGTTTTTGATTTCTTTCAGAATGTTAAAGCCTATTTACGAAGAGGAACCGCAAGAGAAATGTTAGGCGATTGCAAGGGAGCCATAGAAGATTTCAGATACGCACTTGTGCTGGAACCAAACAACAAACGAGCGTCTCTCTCAGCAGAGAGACTGAGAAAATTCCAGTGAGCTTCTTTTGTCCGTACCTCACCGATCATTGAGAAAACGTTTGTTCCTTAGAATTTGTCCAAGAGTATAGGCCAATTTTGTCAACACTTGTCTTTTGCGTCTGATATTTAGGCATTTTATCTAGAGATACCTTTTGCAAGTCCGCCGAGAATGGAAAATTATAATATCCGATGTTTATTTTAAACGTTCTCTAAAATTGGATATCAAAAAGTAATGTTAATCTT
CDS Sequence
- >AT3G17970.2
ATGGCGTCTCAAGCTGCGAATCTCTGGGTTCTTCTAGGTTTAGGTCTCGCTGGGATTCTTATGCTTACCAAAAAGCTGAAGAAGACCGTCCGTGAAGATTTCGGCGCTTTTATCGATAAACTCATGCTTCTTCCCCCTCCGCAACCTGCTCCTCCCAAAGCTCCTCATCCTCTCACCGGTCTAACCTTTGCCGTTTCCGACGTATTCGATATTACAGGGTATGTGACTGGATTTGGTCATCCAGACTGGGTCAGGACCCATGAAGCTGCTTCGTCAACATCTCCTGTGGTTTCAACTCTCGTTGAAGGTGGAGCCACTTGTGTTGGAAAAACTGTAGTTGATGAGTTTGCGTTTAGTATTAGTGGAGAAAACAAGCATTACGATTCACCTACAAATCCTGCAGCTCCTACTCGTATTCCTGGTGGCGCTTGCAGTGGAGCTGCTGTAGCCGTAGCAACAAATGCTGTGGATTTTGCTCTAGGCATCGACACAGTTGGCGGGGTAAGAGTGCCTGCTGGATACTGTGGCGTTCTTGGATTCAAATCTTCTTATGGGGCTATTTCAAACACCGGAATCATACCAGTATCTTCAAGTCTTGACTCTGTTGGATGGTTTGCCCGCGATCCAAACACCCTACGTCGTGTTGGCCATGTACTCTTGCAACTTCCATTTGCCACTCAACGGAATCCAAGGCAAATCATACTAGCTGATGACTGTTTTCAGCTGTTAAAGATCCCTGTGGATCGGATTACCCAGGTGGTGACCAAATCAGCTGAAAAGCTTTTTGGAAGACAATTGCTAAAGCATCAGAACTTGGAGACCTATTTTGAAACTAAAGTTCCTAGCTTGAAAGAGTTCGCTAGGACAAAAGCCATTGCTAACACGAAGGTCTCAACATCGAGACTACTGGCGAATGTGATGCAGCTCCTTCAAAGGCACGAGTTCCTTCAAAATCATGGGGATTGGATCAACACAGTGAAGCCAGCCATTGATCCTGTGATTTTATCACAAGTGTGTGAGAACCCAGAACTAACCAATGAAGAGACTGAGAACCTGAATGCTATCAGAAACGAGACTCGAGTGGCTATTGGTTCACTTCTCAAGGATGATGGCATTCTGGTAATTCCAACATTGCCAGCTGTTCCTCCAAAACTTGGTAGCAAGGAGATAACATCTGAAGACTATCAAAACCGAGCTTCAAGTCTGCTTAGCATTGCTAGCATATCAGGATGTTGTCAGGTGACTGTGCCACTCGGACATCATGAGAAATGCCCTATTTCAGTTTCTTTCATAGGAAGACACGGTGGTGACCGCTTTTTACTAGATACAGTGCAGACAATGTATCCATCTTTGCAAGAGTACTCGAGTATTGTTACCGATCCCAAATCTTCTAAAAAGGCTATCACCAAAGAAGAGTCAGCCGAGATTGCCAAAGAGAAGGGTAACCAAGCGTTCAAAGAGAAACTATGGCAGAAAGCTATTGGTCTATACTCAGAAGCTATAAAGCTAAGTGACAACAATGCTACCTATTACAGTAACAGAGCTGCTGCATATCTTGAACTTGGAGGCTTTCTTCAAGCCGAAGAAGACTGTACCAAAGCCATCACCCTCGACAAGAAGGTAACTTTCATTAAAACACAGAAACAGGTTTCTCTTGAAAAAAAAACACTCTTTACTTTGTAA - >AT3G17970.1
ATGGCGTCTCAAGCTGCGAATCTCTGGGTTCTTCTAGGTTTAGGTCTCGCTGGGATTCTTATGCTTACCAAAAAGCTGAAGAAGACCGTCCGTGAAGATTTCGGCGCTTTTATCGATAAACTCATGCTTCTTCCCCCTCCGCAACCTGCTCCTCCCAAAGCTCCTCATCCTCTCACCGGTCTAACCTTTGCCGTTTCCGACGTATTCGATATTACAGGGTATGTGACTGGATTTGGTCATCCAGACTGGGTCAGGACCCATGAAGCTGCTTCGTCAACATCTCCTGTGGTTTCAACTCTCGTTGAAGGTGGAGCCACTTGTGTTGGAAAAACTGTAGTTGATGAGTTTGCGTTTAGTATTAGTGGAGAAAACAAGCATTACGATTCACCTACAAATCCTGCAGCTCCTACTCGTATTCCTGGTGGCGCTTGCAGTGGAGCTGCTGTAGCCGTAGCAACAAATGCTGTGGATTTTGCTCTAGGCATCGACACAGTTGGCGGGGTAAGAGTGCCTGCTGGATACTGTGGCGTTCTTGGATTCAAATCTTCTTATGGGGCTATTTCAAACACCGGAATCATACCAGTATCTTCAAGTCTTGACTCTGTTGGATGGTTTGCCCGCGATCCAAACACCCTACGTCGTGTTGGCCATGTACTCTTGCAACTTCCATTTGCCACTCAACGGAATCCAAGGCAAATCATACTAGCTGATGACTGTTTTCAGCTGTTAAAGATCCCTGTGGATCGGATTACCCAGGTGGTGACCAAATCAGCTGAAAAGCTTTTTGGAAGACAATTGCTAAAGCATCAGAACTTGGAGACCTATTTTGAAACTAAAGTTCCTAGCTTGAAAGAGTTCGCTAGGACAAAAGCCATTGCTAACACGAAGGTCTCAACATCGAGACTACTGGCGAATGTGATGCAGCTCCTTCAAAGGCACGAGTTCCTTCAAAATCATGGGGATTGGATCAACACAGTGAAGCCAGCCATTGATCCTGTGATTTTATCACAAGTGTGTGAGAACCCAGAACTAACCAATGAAGAGACTGAGAACCTGAATGCTATCAGAAACGAGACTCGAGTGGCTATTGGTTCACTTCTCAAGGATGATGGCATTCTGGTAATTCCAACATTGCCAGCTGTTCCTCCAAAACTTGGTAGCAAGGAGATAACATCTGAAGACTATCAAAACCGAGCTTCAAGTCTGCTTAGCATTGCTAGCATATCAGGATGTTGTCAGGTGACTGTGCCACTCGGACATCATGAGAAATGCCCTATTTCAGTTTCTTTCATAGGAAGACACGGTGGTGACCGCTTTTTACTAGATACAGTGCAGACAATGTATCCATCTTTGCAAGAGTACTCGAGTATTGTTACCGATCCCAAATCTTCTAAAAAGGCTATCACCAAAGAAGAGTCAGCCGAGATTGCCAAAGAGAAGGGTAACCAAGCGTTCAAAGAGAAACTATGGCAGAAAGCTATTGGTCTATACTCAGAAGCTATAAAGCTAAGTGACAACAATGCTACCTATTACAGTAACAGAGCTGCTGCATATCTTGAACTTGGAGGCTTTCTTCAAGCCGAAGAAGACTGTACCAAAGCCATCACCCTCGACAAGAAGGTAACTTTCATTAAAACACAGAAACAGGTTTCTCTTGAAAAAAAAACACTCTTTACTTTGTAA
Protein Sequence
- >AT3G17970.2
MASQAANLWVLLGLGLAGILMLTKKLKKTVREDFGAFIDKLMLLPPPQPAPPKAPHPLTGLTFAVSDVFDITGYVTGFGHPDWVRTHEAASSTSPVVSTLVEGGATCVGKTVVDEFAFSISGENKHYDSPTNPAAPTRIPGGACSGAAVAVATNAVDFALGIDTVGGVRVPAGYCGVLGFKSSYGAISNTGIIPVSSSLDSVGWFARDPNTLRRVGHVLLQLPFATQRNPRQIILADDCFQLLKIPVDRITQVVTKSAEKLFGRQLLKHQNLETYFETKVPSLKEFARTKAIANTKVSTSRLLANVMQLLQRHEFLQNHGDWINTVKPAIDPVILSQVCENPELTNEETENLNAIRNETRVAIGSLLKDDGILVIPTLPAVPPKLGSKEITSEDYQNRASSLLSIASISGCCQVTVPLGHHEKCPISVSFIGRHGGDRFLLDTVQTMYPSLQEYSSIVTDPKSSKKAITKEESAEIAKEKGNQAFKEKLWQKAIGLYSEAIKLSDNNATYYSNRAAAYLELGGFLQAEEDCTKAITLDKKVTFIKTQKQVSLEKKTLFTL - >AT3G17970.1
MASQAANLWVLLGLGLAGILMLTKKLKKTVREDFGAFIDKLMLLPPPQPAPPKAPHPLTGLTFAVSDVFDITGYVTGFGHPDWVRTHEAASSTSPVVSTLVEGGATCVGKTVVDEFAFSISGENKHYDSPTNPAAPTRIPGGACSGAAVAVATNAVDFALGIDTVGGVRVPAGYCGVLGFKSSYGAISNTGIIPVSSSLDSVGWFARDPNTLRRVGHVLLQLPFATQRNPRQIILADDCFQLLKIPVDRITQVVTKSAEKLFGRQLLKHQNLETYFETKVPSLKEFARTKAIANTKVSTSRLLANVMQLLQRHEFLQNHGDWINTVKPAIDPVILSQVCENPELTNEETENLNAIRNETRVAIGSLLKDDGILVIPTLPAVPPKLGSKEITSEDYQNRASSLLSIASISGCCQVTVPLGHHEKCPISVSFIGRHGGDRFLLDTVQTMYPSLQEYSSIVTDPKSSKKAITKEESAEIAKEKGNQAFKEKLWQKAIGLYSEAIKLSDNNATYYSNRAAAYLELGGFLQAEEDCTKAITLDKKVTFIKTQKQVSLEKKTLFTL