Gene Details:

  • Gene ID: AT3G17609
  • Gene Symbol: HYH
  • Gene Name: HY5-homolog
  • Description: HY5-homolog;(source:Araport11)
  • TAIR Accession: locus:1005716533
  • Genome: Araport11_genome_release
  • Species: Arabidopsis thaliana

Transcripts:

Gene Ontology:

  • GO:0000976  — enables — transcription cis-regulatory region binding
  • GO:0005515  — enables — protein binding
  • GO:0045944  — involved in — positive regulation of transcription by RNA polymerase II
  • GO:0010017  — involved in — red or far-red light signaling pathway
  • GO:0000981  — enables — DNA-binding transcription factor activity, RNA polymerase II-specific
  • GO:0005634  — located in — nucleus
  • GO:0005634  — is active in — nucleus
  • GO:0010099  — involved in — regulation of photomorphogenesis
  • GO:0010114  — involved in — response to red light
  • GO:0003700  — enables — DNA-binding transcription factor activity
  • GO:0010218  — involved in — response to far red light
  • GO:0010224  — acts upstream of or within — response to UV-B

Germplasm Phenotype:

  • cop1-1 hyh  — Indistinguishable from the respective cop1 mutants when grown in darkness.
  • cop1-1 hyh  — No suppression of the light-dependent cop1 phenotype where seedlings bleach and die when transferred from darkness to light. This is in contrast to the phenotype observed in the other two double mutants: cop1-4/hyh and cop1-6/hyh.
  • cop1-4 hyh  — Indistinguishable from the respective cop1 mutants when grown in darkness.
  • cop1-4 hyh  — Suppression in a substantial number of seedlings of the light-dependent cop1 phenotype where seedlings bleach and die when transferred from darkness to light.
  • cop1-6 hyh  — Indistinguishable from the respective cop1 mutants when grown in darkness.
  • cop1-6 hyh  — Suppression in a substantial number of seedlings of the light-dependent cop1 phenotype where seedlings bleach and die when transferred from darkness to light.
  • hy5-KS50 hyh  — Blue-light-grown double-mutant seedlings have a longer hypocotyl than seedlings carrying the hyh or hy5 mutation alone.
  • hy5-KS50 hyh  — Mutant produces significantly reduced levels of anthocyanins and is not responsive to cytokinins at all.
  • hy5-KS50 hyh  — The double-mutant seedlings contains &
  • hyh  — White-light-grown mutant seedlings are slightly paler than wild-type seedlings. No significant difference in chlorophyll content was observed, but hyh seedlings accumulate slightly reduced levels of anthocyanin.

Literature:

Sequences:

cDNA Sequence
  • >AT3G17609.2
    GTTGCAGACTTTGAGTGGCCCCAAAGAAGAAAGAAAAGATGCAATTTCCTTTGGTTTGATATTCTCTTCAACCTCTTACCTCTCTATTCTCGTCTTTAGCAAAATCTCAAAAGACAAAAAGATATTGATGTCTCTCCAACGACCCAATGGGAACTCGAGTTCGTCTTCTTCCCACAAGAAGCACAAAACTGAGGAAAGTGATGAGGAGTTGTTGATGGTTCCTGACATGGAAGCAGCTGGATCAACATGTGTTCTAAGCAGCAGCGCCGACGATGGAGTCAACAATCCGGAGCTTGACCAGACTCAAAATGGAGTCTCTACAGCTAAACGCCGCCGTGGAAGAAACCCTGTTGATAAAGAATATAGAAGCCTCAAGAGATTATTGAGGAACAGAGTATCAGCGCAACAAGCAAGAGAGAGGAAGAAAGTGTATGTGAGTGATTTGGAATCAAGAGCTAATGAGTTACAGAACAACAATGACCAGCTCGAAGAGAAGATTTCTACTTTGACGAACGAGAACACAATGCTTCGTAAAATGCTTATTAACACAAGGCCTAAAACTGATGACAATCACTAAATATTTACCCTTTAATCCATTGTTCAGTGTTGTATGATTATCTTTCTTTCTTTTTTGGTTTTGGTTTGTATACACTTTTTGTTCGAATAACATTCACTTTGAGCATCATTGTCATTCAGATTTGC
  • >AT3G17609.3
    GTTGCAGACTTTGAGTGGCCCCAAAGAAGAAAGAAAAGATGCAATTTCCTTTGGTTTGATATTCTCTTCAACCTCTTACCTCTCTATTCTCGTCTTTAGCAAAATCTCAAAAGACAAAAAGATATTGATGTCTCTCCAACGACCCAATGGGAACTCGAGTTCGTCTTCTTCCCACAAGAAGCACAAAACTGAGGAAAGTGATGAGGAGTTGTTGATGGTTCCTGACATGGAAGCAGCTGGATCAACATGTGTTCTAAGCAGCAGCGCCGACGATGGAGTCAACAATCCGGAGCTTGACCAGACTCAAAATGGAGTCTCTACAGCTAAACGCCGCCGTGGAAGAAACCCTGTTGATAAAGAATATAGAAGCCTCAAGAGATTATTGAGGAACAGAGTATCAGCGCAACAAGCAAGAGAGAGGAAGAAAGTGTATGTGAGTGATTTGGAATCAAGAGCTAATGAGTTACAGAACAACAATGACCAGCTCGAAGAGAAGATTTCTACTTTGACGAACGAGAACACAATGCTTCGTAAAATGCTTATTAACACAAGGCCTAAAACTGATGACAATCACTAAATATTTACCCTTTAATCCATTGTTCAGTGTTGTATGATTATCTTTCTTTCTTTTTTGGTTTTGGTTTGTATACACTTTTTGTTCGAATAACATTCACTTTGAGCATCATTGTCATTCAGATTTGC
  • >AT3G17609.1
    GTTGCAGACTTTGAGTGGCCCCAAAGAAGAAAGAAAAGATGCAATTTCCTTTGGTTTGATATTCTCTTCAACCTCTTACCTCTCTATTCTCGTCTTTAGCAAAATCTCAAAAGACAAAAAGATATTGATGTCTCTCCAACGACCCAATGGGAACTCGAGTTCGTCTTCTTCCCACAAGAAGCACAAAACTGAGGAAAGTGATGAGGAGTTGTTGATGGTTCCTGACATGGAAGCAGCTGGATCAACATGTGTTCTAAGCAGCAGCGCCGACGATGGAGTCAACAATCCGGAGCTTGACCAGACTCAAAATGGAGTCTCTACAGCTAAACGCCGCCGTGGAAGAAACCCTGTTGATAAAGAATATAGAAGCCTCAAGAGATTATTGAGGAACAGAGTATCAGCGCAACAAGCAAGAGAGAGGAAGAAAGTGTATGTGAGTGATTTGGAATCAAGAGCTAATGAGTTACAGAACAACAATGACCAGCTCGAAGAGAAGATTTCTACTTTGACGAACGAGAACACAATGCTTCGTAAAATGCTTATTAACACAAGGCCTAAAACTGATGACAATCACTAAATATTTACCCTTTAATCCATTGTTCAGTGTTGTATGATTATCTTTCTTTCTTTTTTGGTTTTGGTTTGTATACACTTTTTGTTCGAATAACATTCACTTTGAGCATCATTGTCATTCAGATTTGC
  • >AT3G17609.4
    GTTGCAGACTTTGAGTGGCCCCAAAGAAGAAAGAAAAGATGCAATTTCCTTTGGTTTGATATTCTCTTCAACCTCTTACCTCTCTATTCTCGTCTTTAGCAAAATCTCAAAAGACAAAAAGATATTGATGTCTCTCCAACGACCCAATGGGAACTCGAGTTCGTCTTCTTCCCACAAGAAGCACAAAACTGAGGAAAGTGATGAGGAGTTGTTGATGGTTCCTGACATGGAAGCAGCTGGATCAACATGTGTTCTAAGCAGCAGCGCCGACGATGGAGTCAACAATCCGGAGCTTGACCAGACTCAAAATGGAGTCTCTACAGCTAAACGCCGCCGTGGAAGAAACCCTGTTGATAAAGAATATAGAAGCCTCAAGAGATTATTGAGGAACAGAGTATCAGCGCAACAAGCAAGAGAGAGGAAGAAAGTGTATGTGAGTGATTTGGAATCAAGAGCTAATGAGTTACAGAACAACAATGACCAGCTCGAAGAGAAGATTTCTACTTTGACGAACGAGAACACAATGCTTCGTAAAATGCTTATTAACACAAGGCCTAAAACTGATGACAATCACTAAATATTTACCCTTTAATCCATTGTTCAGTGTTGTATGATTATCTTTCTTTCTTTTTTGGTTTTGGTTTGTATACACTTTTTGTTCGAATAACATTCACTTTGAGCATCATTGTCATTCAGATTTGC
CDS Sequence
  • >AT3G17609.2
    ATGTCTCTCCAACGACCCAATGGGAACTCGAGTTCGTCTTCTTCCCACAAGAAGCACAAAACTGAGGAAAGTGATGAGGAGTTGTTGATGGTTCCTGACATGGAAGCAGCTGGATCAACATGTGTTCTAAGCAGCAGCGCCGACGATGGAGTCAACAATCCGGAGCTTGACCAGACTCAAAATGGAGTCTCTACAGCTAAACGCCGCCGTGGAAGAAACCCTGTTGATAAAGAATATAGAAGCCTCAAGAGATTATTGAGGAACAGAGTATCAGCGCAACAAGCAAGAGAGAGGAAGAAAGTGTATGTGAGTGATTTGGAATCAAGAGCTAATGAGTTACAGAACAACAATGACCAGCTCGAAGAGAAGATTTCTACTTTGACGAACGAGAACACAATGCTTCGTAAAATGCTTATTAACACAAGGCCTAAAACTGATGACAATCACTAA
  • >AT3G17609.3
    ATGTCTCTCCAACGACCCAATGGGAACTCGAGTTCGTCTTCTTCCCACAAGAAGCACAAAACTGAGGAAAGTGATGAGGAGTTGTTGATGGTTCCTGACATGGAAGCAGCTGGATCAACATGTGTTCTAAGCAGCAGCGCCGACGATGGAGTCAACAATCCGGAGCTTGACCAGACTCAAAATGGAGTCTCTACAGCTAAACGCCGCCGTGGAAGAAACCCTGTTGATAAAGAATATAGAAGCCTCAAGAGATTATTGAGGAACAGAGTATCAGCGCAACAAGCAAGAGAGAGGAAGAAAGTGTATGTGAGTGATTTGGAATCAAGAGCTAATGAGTTACAGAACAACAATGACCAGCTCGAAGAGAAGATTTCTACTTTGACGAACGAGAACACAATGCTTCGTAAAATGCTTATTAACACAAGGCCTAAAACTGATGACAATCACTAA
  • >AT3G17609.1
    ATGTCTCTCCAACGACCCAATGGGAACTCGAGTTCGTCTTCTTCCCACAAGAAGCACAAAACTGAGGAAAGTGATGAGGAGTTGTTGATGGTTCCTGACATGGAAGCAGCTGGATCAACATGTGTTCTAAGCAGCAGCGCCGACGATGGAGTCAACAATCCGGAGCTTGACCAGACTCAAAATGGAGTCTCTACAGCTAAACGCCGCCGTGGAAGAAACCCTGTTGATAAAGAATATAGAAGCCTCAAGAGATTATTGAGGAACAGAGTATCAGCGCAACAAGCAAGAGAGAGGAAGAAAGTGTATGTGAGTGATTTGGAATCAAGAGCTAATGAGTTACAGAACAACAATGACCAGCTCGAAGAGAAGATTTCTACTTTGACGAACGAGAACACAATGCTTCGTAAAATGCTTATTAACACAAGGCCTAAAACTGATGACAATCACTAA
  • >AT3G17609.4
    ATGTCTCTCCAACGACCCAATGGGAACTCGAGTTCGTCTTCTTCCCACAAGAAGCACAAAACTGAGGAAAGTGATGAGGAGTTGTTGATGGTTCCTGACATGGAAGCAGCTGGATCAACATGTGTTCTAAGCAGCAGCGCCGACGATGGAGTCAACAATCCGGAGCTTGACCAGACTCAAAATGGAGTCTCTACAGCTAAACGCCGCCGTGGAAGAAACCCTGTTGATAAAGAATATAGAAGCCTCAAGAGATTATTGAGGAACAGAGTATCAGCGCAACAAGCAAGAGAGAGGAAGAAAGTGTATGTGAGTGATTTGGAATCAAGAGCTAATGAGTTACAGAACAACAATGACCAGCTCGAAGAGAAGATTTCTACTTTGACGAACGAGAACACAATGCTTCGTAAAATGCTTATTAACACAAGGCCTAAAACTGATGACAATCACTAA
Protein Sequence
  • >AT3G17609.2
    MSLQRPNGNSSSSSSHKKHKTEESDEELLMVPDMEAAGSTCVLSSSADDGVNNPELDQTQNGVSTAKRRRGRNPVDKEYRSLKRLLRNRVSAQQARERKKVYVSDLESRANELQNNNDQLEEKISTLTNENTMLRKMLINTRPKTDDNH
  • >AT3G17609.3
    MSLQRPNGNSSSSSSHKKHKTEESDEELLMVPDMEAAGSTCVLSSSADDGVNNPELDQTQNGVSTAKRRRGRNPVDKEYRSLKRLLRNRVSAQQARERKKVYVSDLESRANELQNNNDQLEEKISTLTNENTMLRKMLINTRPKTDDNH
  • >AT3G17609.1
    MSLQRPNGNSSSSSSHKKHKTEESDEELLMVPDMEAAGSTCVLSSSADDGVNNPELDQTQNGVSTAKRRRGRNPVDKEYRSLKRLLRNRVSAQQARERKKVYVSDLESRANELQNNNDQLEEKISTLTNENTMLRKMLINTRPKTDDNH
  • >AT3G17609.4
    MSLQRPNGNSSSSSSHKKHKTEESDEELLMVPDMEAAGSTCVLSSSADDGVNNPELDQTQNGVSTAKRRRGRNPVDKEYRSLKRLLRNRVSAQQARERKKVYVSDLESRANELQNNNDQLEEKISTLTNENTMLRKMLINTRPKTDDNH