Information report for AT3G17590
Gene Details
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Functional Descriptions
- PO:0000084 — plant sperm cell — célula espermática o esperma (Spanish, exact), male gamete (exact), microgamete (exact), 植物精子細胞 (Japanese, exact), sperm nucleus (related), sperm cell (broad)
- GO:0006338 — involved in — chromatin remodeling
- GO:1900461 — involved in — positive regulation of pseudohyphal growth by positive regulation of transcription from RNA polymerase II promoter
- GO:0005515 — enables — protein binding
- GO:0003712 — enables — transcription coregulator activity
- GO:0006338 — acts upstream of or within — chromatin remodeling
- GO:0005634 — located in — nucleus
- GO:0003682 — enables — chromatin binding
- GO:0005634 — is active in — nucleus
- GO:0000228 — located in — nuclear chromosome
Functional Keywords
Literature and News
- AtSWI3B, an Arabidopsis homolog of SWI3, a core subunit of yeast Swi/Snf chromatin remodeling complex, interacts with FCA, a regulator of flowering time. DOI: 10.1093/nar/gkf458 ; PMID: 12140326
- Effectiveness of RNA interference in transgenic plants. DOI: 10.1016/j.febslet.2004.04.043 ; PMID: 15147899
- The Arabidopsis thaliana SNF2 homolog AtBRM controls shoot development and flowering. DOI: 10.1242/dev.01363 ; PMID: 15371304
- SWI3 subunits of putative SWI/SNF chromatin-remodeling complexes play distinct roles during Arabidopsis development. DOI: 10.1105/tpc.105.031203 ; PMID: 16055636
- The Arabidopsis BRAHMA chromatin-remodeling ATPase is involved in repression of seed maturation genes in leaves. DOI: 10.1104/pp.108.121996 ; PMID: 18508955
- The SNF5-type protein BUSHY regulates seed germination via the gibberellin pathway and is dependent on HUB1 in Arabidopsis. DOI: 10.1007/s00425-021-03767-1 ; PMID: 35006338
- The TRIPLE PHD FINGERS proteins are required for SWI/SNF complex-mediated +1 nucleosome positioning and transcription start site determination in Arabidopsis. DOI: 10.1093/nar/gkac826 ; PMID: 36189880
- Comprehensive characterization of three classes of Arabidopsis SWI/SNF chromatin remodelling complexes. DOI: 10.1038/s41477-022-01282-z ; PMID: 36471048
Gene Resources
- UniProt: Q2HIG1
- EMBL: BT024620
- AlphaFoldDB: Q2HIG1
- EnsemblPlants: AT3G17590.1
- Gramene: AT3G17590.1
- KEGG: ath:AT3G17590
Sequences
cDNA Sequence
- >AT3G17590.1
AAGACATTAGAATATAAGGGTGATTCTGAAATAAATTAAGCTAGCGCCGGAAAAAGATCGAGAAATTGAAATTTCCCACACTCTCTCGCTGACTCTCTTCGAAACTCAATTTGTGAAATTTGGGGGTTTAAGGATGAAGGGTTTAGTGTCTACTGGTTGGAAAGGTCCCGTCAAGTTCAGGATGCCCACTGCTGAAAACTTGGTACCTATTCGATTGGACATTCAATTCGAAGGTCAGCGTTACAAAGATGCTTTCACTTGGAACCCTTCAGACCCGGATAATGAAGTCGTTATCTTTGCCAAAAGAACTGTTAAAGACTTGAAACTTCCCTATGCATTTGTCACTCAGATTGCCCAATCTATTCAGTCTCAGCTCTCAGACTTTCGGGCTTATGAAGGACAAGACATGTACACTGGTGAAAAAATCATACCAATTAAGCTTGATCTCCGAGTTAACCATACTCTCATCAAGGATCAGTTCTTATGGGACCTAAACAATTTTGAGAGTGATCCTGAGGAATTTGCAAGAACCTTGTGCAAGGATTTAGGTGTTGAAGACCCTGAAGTTGGACCTGCTGTTGCCTTTGCAATAAGGGAACAACTTTACGAGATTGCAATTCAAAGTGTGGCTTCAGCTAGGGAGAGTAGATTAAGCAAGAAAGGCCGCAGAGGATCTGATCATGGTTCAGCGAGCAAGGCAAGTGGCCTGTCAATGGACTTAATGAAGTTATTCAGTTTTAAGTCCAGTGTAGTTCGGAAAAGGAAAGACTTGGATGTTTATGAACCAGTTGTGGATCTGCTAACAAGTGAGGAAGTTGATGCGCTTGAAGCCAGGGAAGAGAGACATGCAAGGTGAAGAGTTTCGTTTACATGTATAAATATTTCTTAGGGCAACACTCAAAATATGTTGTATCATGCTTAACTTGAGTTAATGATATTAAGACAATCTTTTATGAGACACATAATCCTTAAGATGCATCCGGTGTGTATGAGTGCCCTGGCC - >AT3G17590.2
AAGACATTAGAATATAAGGGTGATTCTGAAATAAATTAAGCTAGCGCCGGAAAAAGATCGAGAAATTGAAATTTCCCACACTCTCTCGCTGACTCTCTTCGAAACTCAATTTGTGAAATTTGGGGGTTTAAGGATGAAGGGTTTAGTGTCTACTGGTTGGAAAGGTCCCGTCAAGTTCAGGATGCCCACTGCTGAAAACTTGGTACCTATTCGATTGGACATTCAATTCGAAGGTCAGCGTTACAAAGATGCTTTCACTTGGAACCCTTCAGACCCGGATAATGAAGTCGTTATCTTTGCCAAAAGAACTGTTAAAGACTTGAAACTTCCCTATGCATTTGTCACTCAGATTGCCCAATCTATTCAGTCTCAGCTCTCAGACTTTCGGGCTTATGAAGGACAAGACATGTACACTGGTGAAAAAATCATACCAATTAAGCTTGATCTCCGAGTTAACCATACTCTCATCAAGGATCAGTTCTTATGGGACCTAAACAATTTTGAGAGTGATCCTGAGGAATTTGCAAGAACCTTGTGCAAGGATTTAGGTGTTGAAGACCCTGAAGTTGGACCTGCTGTTGCCTTTGCAATAAGGGAACAACTTTACGAGATTGCAATTCAAAGTGTGGCTTCAGCTAGGGAGAGTAGATTAAGCAAGAAAGGCCGCAGAGGATCTGATCATGGTTCAGCGAGCAAGGCAAGTGGCCTGTCAATGGACTTAATGAAGTTATTCAGTTTTAAGTCCAGTGTAGTTCGGAAAAGGAAAGACTTGGATGTTTATGAACCAGTTGTGGATCTGCTAACAAGTGAGGAAGTTGATGCGCTTGAAGCCAGGGAAGAGAGACATGCAAGGTGAAGAGTTTCGTTTACATGTATAAATATTTCTTAGGGCAACACTCAAAATATGTTGTATCATGCTTAACTTGAGTTAATGATATTAAGACAATCTTTTATGAGACACATAATCCTTAAGATGCATCCGGTGTGTATGAGTGCCCTGGCC - >AT3G17590.3
AAGACATTAGAATATAAGGGTGATTCTGAAATAAATTAAGCTAGCGCCGGAAAAAGATCGAGAAATTGAAATTTCCCACACTCTCTCGCTGACTCTCTTCGAAACTCAATTTGTGAAATTTGGGGGTTTAAGGATGAAGGGTTTAGTGTCTACTGGTTGGAAAGGTCCCGTCAAGTTCAGGATGCCCACTGCTGAAAACTTGGTACCTATTCGATTGGACATTCAATTCGAAGGTCAGCGTTACAAAGATGCTTTCACTTGGAACCCTTCAGACCCGGATAATGAAGTCGTTATCTTTGCCAAAAGAACTGTTAAAGACTTGAAACTTCCCTATGCATTTGTCACTCAGATTGCCCAATCTATTCAGTCTCAGCTCTCAGACTTTCGGGCTTATGAAGGACAAGACATGTACACTGGTGAAAAAATCATACCAATTAAGCTTGATCTCCGAGTTAACCATACTCTCATCAAGGATCAGTTCTTATGGGACCTAAACAATTTTGAGAGTGATCCTGAGGAATTTGCAAGAACCTTGTGCAAGGATTTAGGTGTTGAAGACCCTGAAGTTGGACCTGCTGTTGCCTTTGCAATAAGGGAACAACTTTACGAGATTGCAATTCAAAGTGTGGCTTCAGCTAGGGAGAGTAGATTAAGCAAGAAAGGCCGCAGAGGATCTGATCATGGTTCAGCGAGCAAGGCAAGTGGCCTGTCAATGGACTTAATGAAGTTATTCAGTTTTAAGTCCAGTGTAGTTCGGAAAAGGAAAGACTTGGATGTTTATGAACCAGTTGTGGATCTGCTAACAAGTGAGGAAGTTGATGCGCTTGAAGCCAGGGAAGAGAGACATGCAAGGTGAAGAGTTTCGTTTACATGTATAAATATTTCTTAGGGCAACACTCAAAATATGTTGTATCATGCTTAACTTGAGTTAATGATATTAAGACAATCTTTTATGAGACACATAATCCTTAAGATGCATCCGGTGTGTATGAGTGCCCTGGCC
CDS Sequence
- >AT3G17590.1
ATGAAGGGTTTAGTGTCTACTGGTTGGAAAGGTCCCGTCAAGTTCAGGATGCCCACTGCTGAAAACTTGGTACCTATTCGATTGGACATTCAATTCGAAGGTCAGCGTTACAAAGATGCTTTCACTTGGAACCCTTCAGACCCGGATAATGAAGTCGTTATCTTTGCCAAAAGAACTGTTAAAGACTTGAAACTTCCCTATGCATTTGTCACTCAGATTGCCCAATCTATTCAGTCTCAGCTCTCAGACTTTCGGGCTTATGAAGGACAAGACATGTACACTGGTGAAAAAATCATACCAATTAAGCTTGATCTCCGAGTTAACCATACTCTCATCAAGGATCAGTTCTTATGGGACCTAAACAATTTTGAGAGTGATCCTGAGGAATTTGCAAGAACCTTGTGCAAGGATTTAGGTGTTGAAGACCCTGAAGTTGGACCTGCTGTTGCCTTTGCAATAAGGGAACAACTTTACGAGATTGCAATTCAAAGTGTGGCTTCAGCTAGGGAGAGTAGATTAAGCAAGAAAGGCCGCAGAGGATCTGATCATGGTTCAGCGAGCAAGGCAAGTGGCCTGTCAATGGACTTAATGAAGTTATTCAGTTTTAAGTCCAGTGTAGTTCGGAAAAGGAAAGACTTGGATGTTTATGAACCAGTTGTGGATCTGCTAACAAGTGAGGAAGTTGATGCGCTTGAAGCCAGGGAAGAGAGACATGCAAGGTGA - >AT3G17590.2
ATGAAGGGTTTAGTGTCTACTGGTTGGAAAGGTCCCGTCAAGTTCAGGATGCCCACTGCTGAAAACTTGGTACCTATTCGATTGGACATTCAATTCGAAGGTCAGCGTTACAAAGATGCTTTCACTTGGAACCCTTCAGACCCGGATAATGAAGTCGTTATCTTTGCCAAAAGAACTGTTAAAGACTTGAAACTTCCCTATGCATTTGTCACTCAGATTGCCCAATCTATTCAGTCTCAGCTCTCAGACTTTCGGGCTTATGAAGGACAAGACATGTACACTGGTGAAAAAATCATACCAATTAAGCTTGATCTCCGAGTTAACCATACTCTCATCAAGGATCAGTTCTTATGGGACCTAAACAATTTTGAGAGTGATCCTGAGGAATTTGCAAGAACCTTGTGCAAGGATTTAGGTGTTGAAGACCCTGAAGTTGGACCTGCTGTTGCCTTTGCAATAAGGGAACAACTTTACGAGATTGCAATTCAAAGTGTGGCTTCAGCTAGGGAGAGTAGATTAAGCAAGAAAGGCCGCAGAGGATCTGATCATGGTTCAGCGAGCAAGGCAAGTGGCCTGTCAATGGACTTAATGAAGTTATTCAGTTTTAAGTCCAGTGTAGTTCGGAAAAGGAAAGACTTGGATGTTTATGAACCAGTTGTGGATCTGCTAACAAGTGAGGAAGTTGATGCGCTTGAAGCCAGGGAAGAGAGACATGCAAGGTGA - >AT3G17590.3
ATGAAGGGTTTAGTGTCTACTGGTTGGAAAGGTCCCGTCAAGTTCAGGATGCCCACTGCTGAAAACTTGGTACCTATTCGATTGGACATTCAATTCGAAGGTCAGCGTTACAAAGATGCTTTCACTTGGAACCCTTCAGACCCGGATAATGAAGTCGTTATCTTTGCCAAAAGAACTGTTAAAGACTTGAAACTTCCCTATGCATTTGTCACTCAGATTGCCCAATCTATTCAGTCTCAGCTCTCAGACTTTCGGGCTTATGAAGGACAAGACATGTACACTGGTGAAAAAATCATACCAATTAAGCTTGATCTCCGAGTTAACCATACTCTCATCAAGGATCAGTTCTTATGGGACCTAAACAATTTTGAGAGTGATCCTGAGGAATTTGCAAGAACCTTGTGCAAGGATTTAGGTGTTGAAGACCCTGAAGTTGGACCTGCTGTTGCCTTTGCAATAAGGGAACAACTTTACGAGATTGCAATTCAAAGTGTGGCTTCAGCTAGGGAGAGTAGATTAAGCAAGAAAGGCCGCAGAGGATCTGATCATGGTTCAGCGAGCAAGGCAAGTGGCCTGTCAATGGACTTAATGAAGTTATTCAGTTTTAAGTCCAGTGTAGTTCGGAAAAGGAAAGACTTGGATGTTTATGAACCAGTTGTGGATCTGCTAACAAGTGAGGAAGTTGATGCGCTTGAAGCCAGGGAAGAGAGACATGCAAGGTGA
Protein Sequence
- >AT3G17590.1
MKGLVSTGWKGPVKFRMPTAENLVPIRLDIQFEGQRYKDAFTWNPSDPDNEVVIFAKRTVKDLKLPYAFVTQIAQSIQSQLSDFRAYEGQDMYTGEKIIPIKLDLRVNHTLIKDQFLWDLNNFESDPEEFARTLCKDLGVEDPEVGPAVAFAIREQLYEIAIQSVASARESRLSKKGRRGSDHGSASKASGLSMDLMKLFSFKSSVVRKRKDLDVYEPVVDLLTSEEVDALEAREERHAR - >AT3G17590.2
MKGLVSTGWKGPVKFRMPTAENLVPIRLDIQFEGQRYKDAFTWNPSDPDNEVVIFAKRTVKDLKLPYAFVTQIAQSIQSQLSDFRAYEGQDMYTGEKIIPIKLDLRVNHTLIKDQFLWDLNNFESDPEEFARTLCKDLGVEDPEVGPAVAFAIREQLYEIAIQSVASARESRLSKKGRRGSDHGSASKASGLSMDLMKLFSFKSSVVRKRKDLDVYEPVVDLLTSEEVDALEAREERHAR - >AT3G17590.3
MKGLVSTGWKGPVKFRMPTAENLVPIRLDIQFEGQRYKDAFTWNPSDPDNEVVIFAKRTVKDLKLPYAFVTQIAQSIQSQLSDFRAYEGQDMYTGEKIIPIKLDLRVNHTLIKDQFLWDLNNFESDPEEFARTLCKDLGVEDPEVGPAVAFAIREQLYEIAIQSVASARESRLSKKGRRGSDHGSASKASGLSMDLMKLFSFKSSVVRKRKDLDVYEPVVDLLTSEEVDALEAREERHAR