Gene Details:
- Gene ID: AT3G17440
- Gene Symbol: ATNPSN13, NPSN13
- Gene Name: novel plant snare 13
- Description: Putative plant snare 13;(source:Araport11)
- TAIR Accession: locus:2093601
- Genome: Araport11_genome_release
- Species: Arabidopsis thaliana
Transcripts:
Plant Ontology Annotations:
- PO:0000084 — plant sperm cell — célula espermática o esperma (Spanish, exact), male gamete (exact), microgamete (exact), 植物精子細胞 (Japanese, exact), sperm nucleus (related), sperm cell (broad)
- PO:0025195 — pollen tube cell — célula del tubo polínico (Spanish, exact), 花粉管細胞 (Japanese, exact)
- PO:0025281 — pollen — polen (Spanish, exact), pollen grain (exact), 花粉 (Japanese, exact)
Gene Ontology:
- GO:0006906 — involved in — vesicle fusion
- GO:0005886 — located in — plasma membrane
- GO:0012507 — is active in — ER to Golgi transport vesicle membrane
- GO:0005484 — enables — SNAP receptor activity
- GO:0009507 — located in — chloroplast
- GO:0031201 — part of — SNARE complex
- GO:0005789 — is active in — endoplasmic reticulum membrane
- GO:0005794 — is active in — Golgi apparatus
- GO:0031902 — is active in — late endosome membrane
- GO:0005737 — located in — cytoplasm
- GO:0005829 — located in — cytosol
- GO:0000149 — enables — SNARE binding
Function-related keywords:
Literature:
- The Arabidopsis genome. An abundance of soluble N-ethylmaleimide-sensitive factor adaptor protein receptors. DOI: 10.1104/pp.124.4.1558 ; PMID: 11115874
- Identification of new intrinsic proteins in Arabidopsis plasma membrane proteome. DOI: 10.1074/mcp.M400001-MCP200 ; PMID: 15060130
- Systematic analysis of SNARE molecules in Arabidopsis: dissection of the post-Golgi network in plant cells. DOI: 10.1247/csf.29.49 ; PMID: 15342965
- Transcriptome analyses show changes in gene expression to accompany pollen germination and tube growth in Arabidopsis. DOI: 10.1104/pp.108.126375 ; PMID: 18775970
- Identification of new intrinsic proteins in Arabidopsis plasma membrane proteome. DOI: 10.1074/mcp.M400001-MCP200 ; PMID: 15060130
- Quantitative phosphoproteomics of early elicitor signaling in Arabidopsis. DOI: 10.1074/mcp.M600429-MCP200 ; PMID: 17317660
- A high content in lipid-modified peripheral proteins and integral receptor kinases features in the arabidopsis plasma membrane proteome. DOI: 10.1074/mcp.M700099-MCP200 ; PMID: 17644812
- Quantitative phosphoproteomics of early elicitor signaling in Arabidopsis. DOI: 10.1074/mcp.M600429-MCP200 ; PMID: 17317660
- A high content in lipid-modified peripheral proteins and integral receptor kinases features in the arabidopsis plasma membrane proteome. DOI: 10.1074/mcp.M700099-MCP200 ; PMID: 17644812
Sequences:
cDNA Sequence
- >AT3G17440.2
ACACACACCTGACAGCTCTCTTTCCCTTTTCCCGTTCTTTGTCGTCCTTTGTTTCGTCTTTCATTCATTCTCCTTTGTGTTTTCTCTTTTTGGAGATTTTAACTTCAGTTTTTGTCTAATTAGGGTTTTAATTTAAATTGGAGGGAAATTTTAGATGCAGTGACGTAGTTTTTGGGTAAATTTTCGTCGGATTCTGAATTGTCTCCGGCGACATGGCTTCTAATCTCCCCATGAGCCCTCAATTGGAGCAGATCCATGGCGAAATCCGTGACCATTTCCGAGCCCTCGCGAATGGTTTCCAGAGGTTGGATAAGATTAAGGATTCAACTAGACAAAGCAAACAACTTGAAGAACTTACTGACAAGATGAGAGAGTGTAAAAGATTGGTCAAAGAGTTCGACCGTGAACTCAAGGATGAGGAAGCTAGAAATTCTCCTGAAGTAAATAAGCAATTGAACGATGAGAAACAATCTATGATCAAGGAGCTCAATTCTTACGTTGCTCTAAGAAAAACGTATATGAGTACCCTTGGCAACAAGAAAGTTGAGCTTTTTGATATGGGAGCTGGAGTTAGTGGCGAACCTACAGCTGAGGAAAATGTTCAAGTGGCTTCATCTATGTCAAACCAGGAGCTTGTTGATGCTGGAATGAAAAGAATGGATGAGACTGATCAGGCCATTGAGCGCTCAAAACAGGTTGTAGAACAAACACTCGAAGTTGGAACTCAAACTGCAGCTAATTTAAAGGGACAGACGGATCAAATGGGACGCGTAGTTAACCACTTGGACACTATTCAATTCTCAATCAAGAAGGCCTCCCAGCTGGTGAAAGAGATAGGGAGACAGGTGTGTGGCTACCGATAAATGCATAATGGGGTTCCTGTTTCTCATTGTATGCGGTGTAGTAGCCATAATCATAGTGAAGATCGTGAATCCGAATAACAAAGACATTAGGGACATCCCAGGATTAGCTCCTCCAGCGCAATCGAGGAAGCTATTGTACTTGAGGAATCAAGACTACATGTGAGAATATAAATCTCTATTTGTATATTTATTCACGAGGAATGAGGAAATTGCATCTTGAGGTTCGATATTTCCTTCTAATTTGTTAACAATCCATTTCATGGATGTTAGAGAGAGGGTTTGTGCTTGTTGGCATTGTGTGCTTTGATAGTTGACGAGGCTTGGGGATGTTTATCTTCATGTTCTTTTACTTGTTTTAACCCATTCGTTTGAATCTGGGTTTGATTGGAGGGTGTGTATATTTTCAGCTTTTGTCTCTATTTCTTTTTCCTTCTTCTTTTTTGTAGCAACTTATCACTTCTTTTGTATAAAATTCAGACCAATGTTATACTCTCTCACGTTTTCATTA - >AT3G17440.1
ACACACACCTGACAGCTCTCTTTCCCTTTTCCCGTTCTTTGTCGTCCTTTGTTTCGTCTTTCATTCATTCTCCTTTGTGTTTTCTCTTTTTGGAGATTTTAACTTCAGTTTTTGTCTAATTAGGGTTTTAATTTAAATTGGAGGGAAATTTTAGATGCAGTGACGTAGTTTTTGGGTAAATTTTCGTCGGATTCTGAATTGTCTCCGGCGACATGGCTTCTAATCTCCCCATGAGCCCTCAATTGGAGCAGATCCATGGCGAAATCCGTGACCATTTCCGAGCCCTCGCGAATGGTTTCCAGAGGTTGGATAAGATTAAGGATTCAACTAGACAAAGCAAACAACTTGAAGAACTTACTGACAAGATGAGAGAGTGTAAAAGATTGGTCAAAGAGTTCGACCGTGAACTCAAGGATGAGGAAGCTAGAAATTCTCCTGAAGTAAATAAGCAATTGAACGATGAGAAACAATCTATGATCAAGGAGCTCAATTCTTACGTTGCTCTAAGAAAAACGTATATGAGTACCCTTGGCAACAAGAAAGTTGAGCTTTTTGATATGGGAGCTGGAGTTAGTGGCGAACCTACAGCTGAGGAAAATGTTCAAGTGGCTTCATCTATGTCAAACCAGGAGCTTGTTGATGCTGGAATGAAAAGAATGGATGAGACTGATCAGGCCATTGAGCGCTCAAAACAGGTTGTAGAACAAACACTCGAAGTTGGAACTCAAACTGCAGCTAATTTAAAGGGACAGACGGATCAAATGGGACGCGTAGTTAACCACTTGGACACTATTCAATTCTCAATCAAGAAGGCCTCCCAGCTGGTGAAAGAGATAGGGAGACAGGTGTGTGGCTACCGATAAATGCATAATGGGGTTCCTGTTTCTCATTGTATGCGGTGTAGTAGCCATAATCATAGTGAAGATCGTGAATCCGAATAACAAAGACATTAGGGACATCCCAGGATTAGCTCCTCCAGCGCAATCGAGGAAGCTATTGTACTTGAGGAATCAAGACTACATGTGAGAATATAAATCTCTATTTGTATATTTATTCACGAGGAATGAGGAAATTGCATCTTGAGGTTCGATATTTCCTTCTAATTTGTTAACAATCCATTTCATGGATGTTAGAGAGAGGGTTTGTGCTTGTTGGCATTGTGTGCTTTGATAGTTGACGAGGCTTGGGGATGTTTATCTTCATGTTCTTTTACTTGTTTTAACCCATTCGTTTGAATCTGGGTTTGATTGGAGGGTGTGTATATTTTCAGCTTTTGTCTCTATTTCTTTTTCCTTCTTCTTTTTTGTAGCAACTTATCACTTCTTTTGTATAAAATTCAGACCAATGTTATACTCTCTCACGTTTTCATTA
CDS Sequence
- >AT3G17440.2
ATGGCTTCTAATCTCCCCATGAGCCCTCAATTGGAGCAGATCCATGGCGAAATCCGTGACCATTTCCGAGCCCTCGCGAATGGTTTCCAGAGGTTGGATAAGATTAAGGATTCAACTAGACAAAGCAAACAACTTGAAGAACTTACTGACAAGATGAGAGAGTGTAAAAGATTGGTCAAAGAGTTCGACCGTGAACTCAAGGATGAGGAAGCTAGAAATTCTCCTGAAGTAAATAAGCAATTGAACGATGAGAAACAATCTATGATCAAGGAGCTCAATTCTTACGTTGCTCTAAGAAAAACGTATATGAGTACCCTTGGCAACAAGAAAGTTGAGCTTTTTGATATGGGAGCTGGAGTTAGTGGCGAACCTACAGCTGAGGAAAATGTTCAAGTGGCTTCATCTATGTCAAACCAGGAGCTTGTTGATGCTGGAATGAAAAGAATGGATGAGACTGATCAGGCCATTGAGCGCTCAAAACAGGTTGTAGAACAAACACTCGAAGTTGGAACTCAAACTGCAGCTAATTTAAAGGGACAGACGGATCAAATGGGACGCGTAGTTAACCACTTGGACACTATTCAATTCTCAATCAAGAAGGCCTCCCAGCTGGTGAAAGAGATAGGGAGACAGGTGTGTGGCTACCGATAA - >AT3G17440.1
ATGGCTTCTAATCTCCCCATGAGCCCTCAATTGGAGCAGATCCATGGCGAAATCCGTGACCATTTCCGAGCCCTCGCGAATGGTTTCCAGAGGTTGGATAAGATTAAGGATTCAACTAGACAAAGCAAACAACTTGAAGAACTTACTGACAAGATGAGAGAGTGTAAAAGATTGGTCAAAGAGTTCGACCGTGAACTCAAGGATGAGGAAGCTAGAAATTCTCCTGAAGTAAATAAGCAATTGAACGATGAGAAACAATCTATGATCAAGGAGCTCAATTCTTACGTTGCTCTAAGAAAAACGTATATGAGTACCCTTGGCAACAAGAAAGTTGAGCTTTTTGATATGGGAGCTGGAGTTAGTGGCGAACCTACAGCTGAGGAAAATGTTCAAGTGGCTTCATCTATGTCAAACCAGGAGCTTGTTGATGCTGGAATGAAAAGAATGGATGAGACTGATCAGGCCATTGAGCGCTCAAAACAGGTTGTAGAACAAACACTCGAAGTTGGAACTCAAACTGCAGCTAATTTAAAGGGACAGACGGATCAAATGGGACGCGTAGTTAACCACTTGGACACTATTCAATTCTCAATCAAGAAGGCCTCCCAGCTGGTGAAAGAGATAGGGAGACAGGTGTGTGGCTACCGATAA
Protein Sequence
- >AT3G17440.2
MASNLPMSPQLEQIHGEIRDHFRALANGFQRLDKIKDSTRQSKQLEELTDKMRECKRLVKEFDRELKDEEARNSPEVNKQLNDEKQSMIKELNSYVALRKTYMSTLGNKKVELFDMGAGVSGEPTAEENVQVASSMSNQELVDAGMKRMDETDQAIERSKQVVEQTLEVGTQTAANLKGQTDQMGRVVNHLDTIQFSIKKASQLVKEIGRQVCGYR - >AT3G17440.1
MASNLPMSPQLEQIHGEIRDHFRALANGFQRLDKIKDSTRQSKQLEELTDKMRECKRLVKEFDRELKDEEARNSPEVNKQLNDEKQSMIKELNSYVALRKTYMSTLGNKKVELFDMGAGVSGEPTAEENVQVASSMSNQELVDAGMKRMDETDQAIERSKQVVEQTLEVGTQTAANLKGQTDQMGRVVNHLDTIQFSIKKASQLVKEIGRQVCGYR