Information report for AT3G17170
Gene Details
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Functional Descriptions
- GO:0010082 — acts upstream of or within — regulation of root meristem growth
- GO:0042794 — involved in — plastid rRNA transcription
- GO:0010071 — acts upstream of or within — root meristem specification
- GO:2000023 — acts upstream of or within — regulation of lateral root development
- GO:0042794 — acts upstream of or within — plastid rRNA transcription
- GO:0080022 — involved in — primary root development
- GO:0008380 — involved in — RNA splicing
- GO:0010109 — acts upstream of or within — regulation of photosynthesis
- GO:0003735 — enables — structural constituent of ribosome
- GO:0010071 — involved in — root meristem specification
- GO:0005515 — enables — protein binding
- GO:0009536 — located in — plastid
- GO:0070181 — enables — small ribosomal subunit rRNA binding
- GO:0010468 — acts upstream of or within — regulation of gene expression
- GO:0042793 — acts upstream of or within — plastid transcription
- GO:0006364 — involved in — rRNA processing
- GO:0009507 — located in — chloroplast
- GO:0015935 — part of — small ribosomal subunit
- GO:0051644 — acts upstream of or within — plastid localization
- CS3775 — altered composition of fatty acids in roots and seeds: increased oleic acid (18:0) and decreased linoleic (18:2) and linolenic (18:3) acids; fatty acid composition in leaves is similar to wt; produces lateral-root-primordium-like structures but does not form mature lateral roots.
Functional Keywords
Literature and News
- Mutations in a gene for plastid ribosomal protein S6-like protein reveal a novel developmental process required for the correct organization of lateral root meristem in Arabidopsis. DOI: 10.1046/j.1365-313x.2003.01651.x ; PMID: 12581310
- Inactivation of the chloroplast ATP synthase gamma subunit results in high non-photochemical fluorescence quenching and altered nuclear gene expression in Arabidopsis thaliana. DOI: 10.1074/jbc.M308435200 ; PMID: 14576160
- Combinatorial microarray analysis revealing arabidopsis genes implicated in cytokinin responses through the His->Asp Phosphorelay circuitry. DOI: 10.1093/pcp/pci033 ; PMID: 15695462
- Global analysis of Arabidopsis gene expression uncovers a complex array of changes impacting pathogen response and cell cycle during geminivirus infection. DOI: 10.1104/pp.108.121038 ; PMID: 18650403
- Plastid translation is essential for lateral root stem cell patterning in Arabidopsis thaliana. DOI: 10.1242/bio.028175 ; PMID: 29367414
Gene Resources
- UniProt: A0A384KEQ6
- EMBL: CACRSJ010000106, CACSHJ010000089, LUHQ01000003
- AlphaFoldDB: A0A384KEQ6
- EnsemblPlants: AT3G17170.1
- Gramene: AT3G17170.1
- KEGG: ath:AT3G17170
- Orthologous matrix: NIQMESD
- ExpressionAtlas: AT3G17170
- InterPro: IPR000529, IPR014717, IPR020814
- PANTHER: PTHR21011, PTHR21011:SF1
- SUPFAM: SSF54995
- Gene3D: 3.30.70.60
- OrthoDB: A0A384KEQ6
- SWISS-MODEL: A0A384KEQ6
- Conserved Domain Database: cd00473
Homologs
- Oryza sativa TCD11
Sequences
cDNA Sequence
- >AT3G17170.1
GCTAAAACCCTCTCTCCCCTTCTTCTTACTTCACTTCACTCGTGCTTTCTCCAATGGAGTCACTCCTGCACGCGTCTTCGTCTCTGGTGTCTCTGAGACCCAGAATCGACGGTAGAGATTCGTTCATCAACCCGTCACGCGTGTGCCTTAATCCTAGTCTCGGCCGCAGAGGATCTAAACCTCTTCCGTTGGTCGCGGCGGCGAAGAAGAAGAAAAGCAAGAAAGATGACAATCATAACTTTTCAGCTAGACCTGACGAAGCCACTGGTCCTTTTCCTGAATCCATTCTTCTCAAAGAGAAGAAGATTGATGAAGAAGGTGATCTTCTTCCCGAGTTTGCTGATGCTGAAGAAAAGGAGCTATATCAGTTTCTGGATCTTCAGCTTCAGAGTGACTTGAATGAAGAAAGGATGAGGCACTATGAGGTGGTTTACTTGATTCATGAAAAACATGCTGAGGAGGTTGAAAGCATTAACCAGAAAGTACAAGATTACCTGAAGGAGAAGAAGGGGAAAGTTTGGAGGTTTAGTGATTGGGGAATGCGTAGACTGGCTTACAAAATACAGAAGGCAGAGAATGCGCACTATATACTGATGAACTTTGAGATAGAGGCAAAATACTTGAACGAATTCAAGGGATTGTTAGATAGTGATGAGAGGGTGATTAGGCATCTTGTGATGAAACGTGATGAGGCCATAACCGAAGACTGTCCTCCACCTCCTGAGTTTCACTCTGTCCGCGCAGGTGATGAATATTATGACGATGATGAAGAGGAAGAGATTGAAGAAGATGAAGATGAAGGTGAGGGTGAAGATGAAGAAGATGCTGATAATATAGAGTACGAAGTAGATGATGATGGTAATGTCGTTATGGTGTTGTACGGAGATGAAGAAGAAGGAGAAGAAGAAGAAGATGGAGCTAGTGAACAAGAAGAAGGACAGGACAAGTCAACTAATGGTAGAAGAGAAACCCGGAGAACAGTTAACGTAGGAGGTTAGGACTGTCTGTAATTCTTTTGTTTTTGGGTCATGTTTTGGATAATAGGGTCACACATCAAATCGAAGTTGTTTGTTGTACTCATAATAGCATCCTAAGAAGTATATGAGAAACTAAACTATTCCCTTG
CDS Sequence
- >AT3G17170.1
ATGGAGTCACTCCTGCACGCGTCTTCGTCTCTGGTGTCTCTGAGACCCAGAATCGACGGTAGAGATTCGTTCATCAACCCGTCACGCGTGTGCCTTAATCCTAGTCTCGGCCGCAGAGGATCTAAACCTCTTCCGTTGGTCGCGGCGGCGAAGAAGAAGAAAAGCAAGAAAGATGACAATCATAACTTTTCAGCTAGACCTGACGAAGCCACTGGTCCTTTTCCTGAATCCATTCTTCTCAAAGAGAAGAAGATTGATGAAGAAGGTGATCTTCTTCCCGAGTTTGCTGATGCTGAAGAAAAGGAGCTATATCAGTTTCTGGATCTTCAGCTTCAGAGTGACTTGAATGAAGAAAGGATGAGGCACTATGAGGTGGTTTACTTGATTCATGAAAAACATGCTGAGGAGGTTGAAAGCATTAACCAGAAAGTACAAGATTACCTGAAGGAGAAGAAGGGGAAAGTTTGGAGGTTTAGTGATTGGGGAATGCGTAGACTGGCTTACAAAATACAGAAGGCAGAGAATGCGCACTATATACTGATGAACTTTGAGATAGAGGCAAAATACTTGAACGAATTCAAGGGATTGTTAGATAGTGATGAGAGGGTGATTAGGCATCTTGTGATGAAACGTGATGAGGCCATAACCGAAGACTGTCCTCCACCTCCTGAGTTTCACTCTGTCCGCGCAGGTGATGAATATTATGACGATGATGAAGAGGAAGAGATTGAAGAAGATGAAGATGAAGGTGAGGGTGAAGATGAAGAAGATGCTGATAATATAGAGTACGAAGTAGATGATGATGGTAATGTCGTTATGGTGTTGTACGGAGATGAAGAAGAAGGAGAAGAAGAAGAAGATGGAGCTAGTGAACAAGAAGAAGGACAGGACAAGTCAACTAATGGTAGAAGAGAAACCCGGAGAACAGTTAACGTAGGAGGTTAG
Protein Sequence
- >AT3G17170.1
MESLLHASSSLVSLRPRIDGRDSFINPSRVCLNPSLGRRGSKPLPLVAAAKKKKSKKDDNHNFSARPDEATGPFPESILLKEKKIDEEGDLLPEFADAEEKELYQFLDLQLQSDLNEERMRHYEVVYLIHEKHAEEVESINQKVQDYLKEKKGKVWRFSDWGMRRLAYKIQKAENAHYILMNFEIEAKYLNEFKGLLDSDERVIRHLVMKRDEAITEDCPPPPEFHSVRAGDEYYDDDEEEEIEEDEDEGEGEDEEDADNIEYEVDDDGNVVMVLYGDEEEGEEEEDGASEQEEGQDKSTNGRRETRRTVNVGG