Information report for AT3G17100
Gene Details
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Functional Descriptions
- GO:0000976 — enables — transcription cis-regulatory region binding
- GO:0006355 — acts upstream of or within — regulation of DNA-templated transcription
- GO:0003700 — enables — DNA-binding transcription factor activity
- GO:0046983 — enables — protein dimerization activity
- GO:0005634 — located in — nucleus
Functional Keywords
Literature and News
- Arabidopsis transcription factors: genome-wide comparative analysis among eukaryotes. DOI: 10.1126/science.290.5499.2105 ; PMID: 11118137
- The basic helix-loop-helix transcription factor family in plants: a genome-wide study of protein structure and functional diversity. DOI: 10.1093/molbev/msg088 ; PMID: 12679534
- Toxicity of free proline revealed in an arabidopsis T-DNA-tagged mutant deficient in proline dehydrogenase. DOI: 10.1093/pcp/pcg066 ; PMID: 12773641
- The Arabidopsis basic/helix-loop-helix transcription factor family. DOI: 10.1105/tpc.013839 ; PMID: 12897250
- Inactivation of the chloroplast ATP synthase gamma subunit results in high non-photochemical fluorescence quenching and altered nuclear gene expression in Arabidopsis thaliana. DOI: 10.1074/jbc.M308435200 ; PMID: 14576160
- Update on the basic helix-loop-helix transcription factor gene family in Arabidopsis thaliana. DOI: 10.1105/tpc.151140 ; PMID: 14600211
- Global analysis of Arabidopsis gene expression uncovers a complex array of changes impacting pathogen response and cell cycle during geminivirus infection. DOI: 10.1104/pp.108.121038 ; PMID: 18650403
- Regulation of Arabidopsis brassinosteroid signaling by atypical basic helix-loop-helix proteins. DOI: 10.1105/tpc.109.072504 ; PMID: 20023194
- Basic helix-loop-helix transcription factor gene family phylogenetics and nomenclature. DOI: 10.1016/j.diff.2010.02.003 ; PMID: 20219281
- ATBS1 INTERACTING FACTORs negatively regulate Arabidopsis cell elongation in the triantagonistic bHLH system. DOI: 10.4161/psb.23448 ; PMID: 23333962
- An Arabidopsis gene regulatory network for secondary cell wall synthesis. DOI: 10.1038/nature14099 ; PMID: 25533953
- Endogenous Arabidopsis messenger RNAs transported to distant tissues. DOI: 10.1038/nplants.2015.25 ; PMID: 27247031
- Transcriptional regulation of nitrogen-associated metabolism and growth. DOI: 10.1038/s41586-018-0656-3 ; PMID: 30356219
- Modulation of plant development and chilling stress responses by alternative splicing events under control of the spliceosome protein SmEb in Arabidopsis. DOI: 10.1111/pce.14386 ; PMID: 35770732
- Arabidopsis transcription factors: genome-wide comparative analysis among eukaryotes. DOI: 10.1126/science.290.5499.2105 ; PMID: 11118137
- The basic helix-loop-helix transcription factor family in plants: a genome-wide study of protein structure and functional diversity. DOI: 10.1093/molbev/msg088 ; PMID: 12679534
- Arabidopsis transcription factors: genome-wide comparative analysis among eukaryotes. DOI: 10.1126/science.290.5499.2105 ; PMID: 11118137
Gene Resources
- UniProt: B9DGH0
- EMBL: AK317151
- AlphaFoldDB: B9DGH0
- EnsemblPlants: AT3G17100.1, AT3G17100.2
- Gramene: AT3G17100.1, AT3G17100.2
- KEGG: ath:AT3G17100
- Orthologous matrix: MAIENRI
- ExpressionAtlas: AT3G17100
Homologs
- Actinidia chinensis Achn374511
- Brassica napus GSBRNA2T00057522001, GSBRNA2T00027059001, GSBRNA2T00120105001
- Brassica oleracea XP_013583782.1, XP_013622118.1
- Brassica rapa XP_009124805.1, XP_009147148.1, XP_009147147.1
- Citrus sinensis orange1.1g035883m
- Ricinus communis 30128.m008923
Sequences
cDNA Sequence
- >AT3G17100.2
AAGGATAACAATAATTAATTCTAACAGGATAGTGCACATCACATGGCAGAAGTAGGACAGTAATTTGTTTTTGGTTACATGTGTATAAAAATGCGATTCTTTGCTTCATTCCTCTTTGTTAAAATAAAATAAAATAAAAATAAAAGGAAGAAGAAGAAGAAGAAAGGATTCGTCTTCCTTCTTCCACACCCTTTCTGACACCTCATCTCCCCTCCCACCTTCTCCGTCCCGTTCCGTTTCTCCATCAGATCCTCGATTCCGATCCAACAGTTCGAATTCAGTTTCCGATTCTGATCTGATCGAACCAATACTCACTGAGATTTGATCGGCGATTATGGAGTCTATATCTCCGGTATCGAATCAGCTTCTTCAGCCGACGACGACGAGCTCTAATTCCGATCGCTCTCGTCGTAAGCGTAAGAAGAAATCATCGCCATCATCGGTTGAGAAATCTCCATCTCCGTCAATATCGTTGGAGAAATGGAGATCGGAGAAGCAGCAACAGATCTACTCAACGAAGCTAGTTCATGCTTTAAGAGAGCTACGAATCAGCCAACAACCATCTTCATCATCATCTTCTTCGATTCCACGTGGAGGTAGAGCCGTACGTGAAGTCGCCGATAGAGCTTTAGCAGTTGCGGCGAGAGGTAAAACGTTATGGAGTCGAGCGATACTTTCAAAAGCTGTAAAACTCAAATTCAGGAAACACAAACGCCAGAGAATCTCTAATCCGACGACGACGACGTTAACCACCGGGAGTATCAGGTCAAAGAAACAGAGAGCGACGGTTTTGAGGCTTAAGGCTAAAGGTTTGCCAGCTGTACAGAGGAAAGTGAAAGTACTGAGCCGGTTAGTTCCCGGTTGCCGTAAACAATCATTACCGGTGGTTTTAGAAGAAACCACTGATTATATAGCTGCGATGGAGATGCAGATTCGTACTATGACTGCGATTCTCTCCGCCGTTAGTTCTTCTCCTCCGCCGCCAACGCCAGGTCACGAAGGGGGACAAACACACATGCTTGGTTAGTTGGCCAAACTGTCCTTTTATTTTTTTCCAATTTTAAAAACCAAAAAAAAAACTGTTTTTTTTTATCATATTATTATTCTTCTCACTGTATTGTTTGTTGTTTGAATATTTTACTATTCAACTTTATTTACCATTTCGTCATGTATATCCTTTTTTCTTGAATCTCTCTATTACCAAAAAAATTAGTGCCAAGAAGAAGAAACAGGACAGTGATTAATTTATGTATAATCGTAATAAATTTCAGTTTCTTGATAATCGTGGAAGCACATTTGAGAGATTGTGATTTAGTTTGTTGTTTTTGCAATACTTGTTGATTAAGATAACAACTGTGGACATAATGACAAATTTGTTTTTAAAGTGTTTGGTGAATTAATGATATGGCAAAATGAAACAATGGAGAGTATAATTAGTTTTTGTTTTGTTATGTTTGAAGTTAGGTTGGTGATTGGAACTGAGTTCTCTAGATCTGTTATGACAACATTTATTTTC - >AT3G17100.1
AAGGATAACAATAATTAATTCTAACAGGATAGTGCACATCACATGGCAGAAGTAGGACAGTAATTTGTTTTTGGTTACATGTGTATAAAAATGCGATTCTTTGCTTCATTCCTCTTTGTTAAAATAAAATAAAATAAAAATAAAAGGAAGAAGAAGAAGAAGAAAGGATTCGTCTTCCTTCTTCCACACCCTTTCTGACACCTCATCTCCCCTCCCACCTTCTCCGTCCCGTTCCGTTTCTCCATCAGATCCTCGATTCCGATCCAACAGTTCGAATTCAGTTTCCGATTCTGATCTGATCGAACCAATACTCACTGAGATTTGATCGGCGATTATGGAGTCTATATCTCCGGTATCGAATCAGCTTCTTCAGCCGACGACGACGAGCTCTAATTCCGATCGCTCTCGTCGTAAGCGTAAGAAGAAATCATCGCCATCATCGGTTGAGAAATCTCCATCTCCGTCAATATCGTTGGAGAAATGGAGATCGGAGAAGCAGCAACAGATCTACTCAACGAAGCTAGTTCATGCTTTAAGAGAGCTACGAATCAGCCAACAACCATCTTCATCATCATCTTCTTCGATTCCACGTGGAGGTAGAGCCGTACGTGAAGTCGCCGATAGAGCTTTAGCAGTTGCGGCGAGAGGTAAAACGTTATGGAGTCGAGCGATACTTTCAAAAGCTGTAAAACTCAAATTCAGGAAACACAAACGCCAGAGAATCTCTAATCCGACGACGACGACGTTAACCACCGGGAGTATCAGGTCAAAGAAACAGAGAGCGACGGTTTTGAGGCTTAAGGCTAAAGGTTTGCCAGCTGTACAGAGGAAAGTGAAAGTACTGAGCCGGTTAGTTCCCGGTTGCCGTAAACAATCATTACCGGTGGTTTTAGAAGAAACCACTGATTATATAGCTGCGATGGAGATGCAGATTCGTACTATGACTGCGATTCTCTCCGCCGTTAGTTCTTCTCCTCCGCCGCCAACGCCAGGTCACGAAGGGGGACAAACACACATGCTTGGTTAGTTGGCCAAACTGTCCTTTTATTTTTTTCCAATTTTAAAAACCAAAAAAAAAACTGTTTTTTTTTATCATATTATTATTCTTCTCACTGTATTGTTTGTTGTTTGAATATTTTACTATTCAACTTTATTTACCATTTCGTCATGTATATCCTTTTTTCTTGAATCTCTCTATTACCAAAAAAATTAGTGCCAAGAAGAAGAAACAGGACAGTGATTAATTTATGTATAATCGTAATAAATTTCAGTTTCTTGATAATCGTGGAAGCACATTTGAGAGATTGTGATTTAGTTTGTTGTTTTTGCAATACTTGTTGATTAAGATAACAACTGTGGACATAATGACAAATTTGTTTTTAAAGTGTTTGGTGAATTAATGATATGGCAAAATGAAACAATGGAGAGTATAATTAGTTTTTGTTTTGTTATGTTTGAAGTTAGGTTGGTGATTGGAACTGAGTTCTCTAGATCTGTTATGACAACATTTATTTTC
CDS Sequence
- >AT3G17100.2
ATGGAGTCTATATCTCCGGTATCGAATCAGCTTCTTCAGCCGACGACGACGAGCTCTAATTCCGATCGCTCTCGTCGTAAGCGTAAGAAGAAATCATCGCCATCATCGGTTGAGAAATCTCCATCTCCGTCAATATCGTTGGAGAAATGGAGATCGGAGAAGCAGCAACAGATCTACTCAACGAAGCTAGTTCATGCTTTAAGAGAGCTACGAATCAGCCAACAACCATCTTCATCATCATCTTCTTCGATTCCACGTGGAGGTAGAGCCGTACGTGAAGTCGCCGATAGAGCTTTAGCAGTTGCGGCGAGAGGTAAAACGTTATGGAGTCGAGCGATACTTTCAAAAGCTGTAAAACTCAAATTCAGGAAACACAAACGCCAGAGAATCTCTAATCCGACGACGACGACGTTAACCACCGGGAGTATCAGGTCAAAGAAACAGAGAGCGACGGTTTTGAGGCTTAAGGCTAAAGGTTTGCCAGCTGTACAGAGGAAAGTGAAAGTACTGAGCCGGTTAGTTCCCGGTTGCCGTAAACAATCATTACCGGTGGTTTTAGAAGAAACCACTGATTATATAGCTGCGATGGAGATGCAGATTCGTACTATGACTGCGATTCTCTCCGCCGTTAGTTCTTCTCCTCCGCCGCCAACGCCAGGTCACGAAGGGGGACAAACACACATGCTTGGTTAG - >AT3G17100.1
ATGGAGTCTATATCTCCGGTATCGAATCAGCTTCTTCAGCCGACGACGACGAGCTCTAATTCCGATCGCTCTCGTCGTAAGCGTAAGAAGAAATCATCGCCATCATCGGTTGAGAAATCTCCATCTCCGTCAATATCGTTGGAGAAATGGAGATCGGAGAAGCAGCAACAGATCTACTCAACGAAGCTAGTTCATGCTTTAAGAGAGCTACGAATCAGCCAACAACCATCTTCATCATCATCTTCTTCGATTCCACGTGGAGGTAGAGCCGTACGTGAAGTCGCCGATAGAGCTTTAGCAGTTGCGGCGAGAGGTAAAACGTTATGGAGTCGAGCGATACTTTCAAAAGCTGTAAAACTCAAATTCAGGAAACACAAACGCCAGAGAATCTCTAATCCGACGACGACGACGTTAACCACCGGGAGTATCAGGTCAAAGAAACAGAGAGCGACGGTTTTGAGGCTTAAGGCTAAAGGTTTGCCAGCTGTACAGAGGAAAGTGAAAGTACTGAGCCGGTTAGTTCCCGGTTGCCGTAAACAATCATTACCGGTGGTTTTAGAAGAAACCACTGATTATATAGCTGCGATGGAGATGCAGATTCGTACTATGACTGCGATTCTCTCCGCCGTTAGTTCTTCTCCTCCGCCGCCAACGCCAGGTCACGAAGGGGGACAAACACACATGCTTGGTTAG
Protein Sequence
- >AT3G17100.2
MESISPVSNQLLQPTTTSSNSDRSRRKRKKKSSPSSVEKSPSPSISLEKWRSEKQQQIYSTKLVHALRELRISQQPSSSSSSSIPRGGRAVREVADRALAVAARGKTLWSRAILSKAVKLKFRKHKRQRISNPTTTTLTTGSIRSKKQRATVLRLKAKGLPAVQRKVKVLSRLVPGCRKQSLPVVLEETTDYIAAMEMQIRTMTAILSAVSSSPPPPTPGHEGGQTHMLG - >AT3G17100.1
MESISPVSNQLLQPTTTSSNSDRSRRKRKKKSSPSSVEKSPSPSISLEKWRSEKQQQIYSTKLVHALRELRISQQPSSSSSSSIPRGGRAVREVADRALAVAARGKTLWSRAILSKAVKLKFRKHKRQRISNPTTTTLTTGSIRSKKQRATVLRLKAKGLPAVQRKVKVLSRLVPGCRKQSLPVVLEETTDYIAAMEMQIRTMTAILSAVSSSPPPPTPGHEGGQTHMLG