Information report for AT3G17000
Gene Details
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Functional Descriptions
- PO:0025195 — pollen tube cell — célula del tubo polínico (Spanish, exact), 花粉管細胞 (Japanese, exact)
- PO:0025281 — pollen — polen (Spanish, exact), pollen grain (exact), 花粉 (Japanese, exact)
- GO:0005783 — colocalizes with — endoplasmic reticulum
- GO:0006511 — involved in — ubiquitin-dependent protein catabolic process
- GO:1902457 — acts upstream of or within — negative regulation of stomatal opening
- GO:0004842 — enables — ubiquitin-protein transferase activity
- GO:0042631 — acts upstream of or within — cellular response to water deprivation
- GO:0006511 — acts upstream of or within — ubiquitin-dependent protein catabolic process
- GO:0061631 — enables — ubiquitin conjugating enzyme activity
- GO:0005515 — enables — protein binding
- GO:0005634 — is active in — nucleus
- GO:0016020 — located in — membrane
- GO:0005783 — located in — endoplasmic reticulum
- GO:0048471 — located in — perinuclear region of cytoplasm
- GO:0005634 — located in — nucleus
- atubc32/atubc33/atubc34 — Increased tolerance to drought stress, ABA sensitivity to stomatal movement.
Functional Keywords
Literature and News
- Ubiquitylation in plants: a post-genomic look at a post-translational modification. DOI: 10.1016/s1360-1385(01)02080-5 ; PMID: 11590065
- Genomic evidence for COP1 as a repressor of light-regulated gene expression and development in Arabidopsis. DOI: 10.1105/tpc.004416 ; PMID: 12368493
- Two different novel cis-acting elements of erd1, a clpA homologous Arabidopsis gene function in induction by dehydration stress and dark-induced senescence. DOI: 10.1046/j.1365-313x.2003.01624.x ; PMID: 12535340
- The response regulator 2 mediates ethylene signalling and hormone signal integration in Arabidopsis. DOI: 10.1038/sj.emboj.7600337 ; PMID: 15282545
- Genome analysis and functional characterization of the E2 and RING-type E3 ligase ubiquitination enzymes of Arabidopsis. DOI: 10.1104/pp.105.067983 ; PMID: 16339806
- Global analysis of Arabidopsis gene expression uncovers a complex array of changes impacting pathogen response and cell cycle during geminivirus infection. DOI: 10.1104/pp.108.121038 ; PMID: 18650403
- Transcriptome analyses show changes in gene expression to accompany pollen germination and tube growth in Arabidopsis. DOI: 10.1104/pp.108.126375 ; PMID: 18775970
- Identification of imprinted genes subject to parent-of-origin specific expression in Arabidopsis thaliana seeds. DOI: 10.1186/1471-2229-11-113 ; PMID: 21838868
- Wheat germ-based protein libraries for the functional characterisation of the Arabidopsis E2 ubiquitin conjugating enzymes and the RING-type E3 ubiquitin ligase enzymes. DOI: 10.1186/s12870-015-0660-9 ; PMID: 26556605
- EMR, a cytosolic-abundant ring finger E3 ligase, mediates ER-associated protein degradation in Arabidopsis. DOI: 10.1111/nph.15279 ; PMID: 29932218
- Arabidopsis group XIV ubiquitin-conjugating enzymes AtUBC32, AtUBC33, and AtUBC34 play negative roles in drought stress response. DOI: 10.1016/j.jplph.2018.08.010 ; PMID: 30193177
- Regulation of the stability and ABA import activity of NRT1.2/NPF4.6 by CEPR2-mediated phosphorylation in Arabidopsis. DOI: 10.1016/j.molp.2021.01.009 ; PMID: 33453414
- ERAD-related E2 and E3 enzymes modulate the drought response by regulating the stability of PIP2 aquaporins. DOI: 10.1093/plcell/koab141 ; PMID: 34015125
- SIMP1 modulates salt tolerance by elevating ERAD efficiency through UMP1A-mediated proteasome maturation in plants. DOI: 10.1111/nph.17628 ; PMID: 34273177
- Root Membrane Ubiquitinome under Short-Term Osmotic Stress. DOI: 10.3390/ijms23041956 ; PMID: 35216074
Gene Resources
Homologs
- Actinidia chinensis Achn303171
- Brassica napus GSBRNA2T00018566001, BnaC05G0115200ZS, BnaA06G0093900ZS
- Brassica oleracea Bol023045, Bo5g019560
- Brassica rapa Bra017410, Bra026222
- Gossypium hirsutum GhUCE
- Musa acuminata Ma06_g06440
- Oryza sativa OsUBC5b, OsUBC18, OsUBC5a
Sequences
cDNA Sequence
- >AT3G17000.1
GTCTCGCCACGATAGCTTAATGATTCTCCCAAATCGACGGCTGTAAAGAGGCGCTTAAATTTCTCAGATTACGTGACAGTTTCTGAACCGTTGAGATGTTTGGATGACTAAAGTTTATTAATTACGTGGCACTTACTCAGAAGCTCTCTCACGTCACGTATCCGTCGTTAAAGAGTGTGACGTGGAAAATGTTTTGGAATTAATTTTGTGTGTTTGTATTATATCACCGTACTAATTAGCTCATCTCCCGAAGCCATGTGGTAATTCTAATTTTGTGTATTTATTATTTTCTGTTAAGACGAATCGGACAGAGAGAACTCCGGCGGCGGATTGCACTTCCGGCAAGATCTCGTGGGGATAAATAAGATGGCGGATGAGAGGTATAATCGGAAGAATCCGGCGGTGAAGAGGATTTTGCAGGAGGTTAAGGAGATGCAAGCTAATCCGTCTGATGATTTTATGTCTCTTCCTCTTGAGGAGAATATCTTTGAGTGGCAATTCGCCATCCGAGGTCCTGGTGATACTGAATTCGAGGGCGGGATTTATCATGGGAGAATTCAGTTGCCTGCAGATTATCCATTCAAACCTCCTTCATTCATGTTATTGACCCCTAACGGGCGCTTTGAAACTAACACCAAGATTTGCTTGAGCATTTCAAACTACCACCCTGAGCATTGGCAACCTTCATGGAGTGTTCGGACTGCTTTGGTGGCTCTCATTGCATTTATGCCCACAAGTCCCAATGGAGCACTGGGCTCAGTAGATTATCCAAAGGATGAGAGACGTACACTAGCCATTAAATCACGTGAGACACCACCTAAGTATGGCTCTCCTGAACGGCAAAAAATTATTGATGAGATTCATCAGTACATCCTTAGCAAAGCAACCGTGGTTCCAAAACCTCTTCCTCTGGAATGTAGCCAAGCACCTTCCATCGTATCAGAAGCTCACTCCCAAGTTGAGCCACAGGAAGCGATAACTGTAGTAGAAGAGCGGTCCATCGCTACAACAGACACCATAGTTGATGATCAAATCATAGAAGAGACAGCTGAAGCAGTCAATACAGCAGCTAGTGTGGTTCCCGCTGCAGCACCTTTACCAGCGGTTGAAGTTGTGGTCAAAGCTTCTGTAAGTGGTGAGCAAAGGATGGCCAGAAGAGCGGCTCAGAAGCCAGTCGATGACAGACTCTTCACGTGGGCGGCGGTTGGGCTCACAATCGCTATCATGGTTCTTCTTCTGAAGAAGTTCATAAAATCAAATGGTTACAGTACTGGGTTTATGGATGATCAGTCTTGAACTCTGATGAAAGTCAATGCTGCGTTTAAGAAATGGGGTTGTGTTGTTTAATATTTTATAAATATAATTAAAGTGCATAATGGCGTAAATAATTTCTGTGTGACATTGTCTTGCAACTTAGTTGATAGATTGGATTATAGCTTGTGACCAAGTTAACAATATGTATTTTGGAATTGAACACTGACGACCGTTTTATCAATACATTGATGCTTTGTTAATAGAATTGTTGATTACCTCCACTATGTTCATAACTATTTCCCGTTTTGAGTACATGATGTCT
CDS Sequence
- >AT3G17000.1
ATGGCGGATGAGAGGTATAATCGGAAGAATCCGGCGGTGAAGAGGATTTTGCAGGAGGTTAAGGAGATGCAAGCTAATCCGTCTGATGATTTTATGTCTCTTCCTCTTGAGGAGAATATCTTTGAGTGGCAATTCGCCATCCGAGGTCCTGGTGATACTGAATTCGAGGGCGGGATTTATCATGGGAGAATTCAGTTGCCTGCAGATTATCCATTCAAACCTCCTTCATTCATGTTATTGACCCCTAACGGGCGCTTTGAAACTAACACCAAGATTTGCTTGAGCATTTCAAACTACCACCCTGAGCATTGGCAACCTTCATGGAGTGTTCGGACTGCTTTGGTGGCTCTCATTGCATTTATGCCCACAAGTCCCAATGGAGCACTGGGCTCAGTAGATTATCCAAAGGATGAGAGACGTACACTAGCCATTAAATCACGTGAGACACCACCTAAGTATGGCTCTCCTGAACGGCAAAAAATTATTGATGAGATTCATCAGTACATCCTTAGCAAAGCAACCGTGGTTCCAAAACCTCTTCCTCTGGAATGTAGCCAAGCACCTTCCATCGTATCAGAAGCTCACTCCCAAGTTGAGCCACAGGAAGCGATAACTGTAGTAGAAGAGCGGTCCATCGCTACAACAGACACCATAGTTGATGATCAAATCATAGAAGAGACAGCTGAAGCAGTCAATACAGCAGCTAGTGTGGTTCCCGCTGCAGCACCTTTACCAGCGGTTGAAGTTGTGGTCAAAGCTTCTGTAAGTGGTGAGCAAAGGATGGCCAGAAGAGCGGCTCAGAAGCCAGTCGATGACAGACTCTTCACGTGGGCGGCGGTTGGGCTCACAATCGCTATCATGGTTCTTCTTCTGAAGAAGTTCATAAAATCAAATGGTTACAGTACTGGGTTTATGGATGATCAGTCTTGA
Protein Sequence
- >AT3G17000.1
MADERYNRKNPAVKRILQEVKEMQANPSDDFMSLPLEENIFEWQFAIRGPGDTEFEGGIYHGRIQLPADYPFKPPSFMLLTPNGRFETNTKICLSISNYHPEHWQPSWSVRTALVALIAFMPTSPNGALGSVDYPKDERRTLAIKSRETPPKYGSPERQKIIDEIHQYILSKATVVPKPLPLECSQAPSIVSEAHSQVEPQEAITVVEERSIATTDTIVDDQIIEETAEAVNTAASVVPAAAPLPAVEVVVKASVSGEQRMARRAAQKPVDDRLFTWAAVGLTIAIMVLLLKKFIKSNGYSTGFMDDQS