Information report for AT3G16870
Gene Details
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Functional Descriptions
- PO:0000084 — plant sperm cell — célula espermática o esperma (Spanish, exact), male gamete (exact), microgamete (exact), 植物精子細胞 (Japanese, exact), sperm nucleus (related), sperm cell (broad)
- PO:0025195 — pollen tube cell — célula del tubo polínico (Spanish, exact), 花粉管細胞 (Japanese, exact)
- PO:0025281 — pollen — polen (Spanish, exact), pollen grain (exact), 花粉 (Japanese, exact)
- GO:0016070 — acts upstream of or within — RNA metabolic process
- GO:0044085 — acts upstream of or within — cellular component biogenesis
- GO:0006355 — acts upstream of or within — regulation of DNA-templated transcription
- GO:0043412 — acts upstream of or within — macromolecule modification
- GO:0006355 — involved in — regulation of DNA-templated transcription
- GO:0009888 — acts upstream of or within — tissue development
- GO:0008270 — enables — zinc ion binding
- GO:0003700 — enables — DNA-binding transcription factor activity
- GO:0000976 — enables — transcription cis-regulatory region binding
- GO:0005634 — located in — nucleus
Functional Keywords
Literature and News
- Arabidopsis transcription factors: genome-wide comparative analysis among eukaryotes. DOI: 10.1126/science.290.5499.2105 ; PMID: 11118137
- Interaction of a GATA factor with cis-acting elements involved in light regulation of nuclear genes encoding chloroplast glyceraldehyde-3-phosphate dehydrogenase in Arabidopsis. DOI: 10.1016/s0006-291x(02)02892-9 ; PMID: 12504119
- Microarray analysis of E2Fa-DPa-overexpressing plants uncovers a cross-talking genetic network between DNA replication and nitrogen assimilation. DOI: 10.1242/jcs.00715 ; PMID: 12953064
- The GATA family of transcription factors in Arabidopsis and rice. DOI: 10.1104/pp.103.037788 ; PMID: 15084732
- Genetic analysis of Arabidopsis GATA transcription factor gene family reveals a nitrate-inducible member important for chlorophyll synthesis and glucose sensitivity. DOI: 10.1111/j.1365-313X.2005.02568.x ; PMID: 16262716
- Conservation, convergence, and divergence of light-responsive, circadian-regulated, and tissue-specific expression patterns during evolution of the Arabidopsis GATA gene family. DOI: 10.1104/pp.106.090761 ; PMID: 17208962
- Transcriptome analyses show changes in gene expression to accompany pollen germination and tube growth in Arabidopsis. DOI: 10.1104/pp.108.126375 ; PMID: 18775970
- Four distinct types of dehydration stress memory genes in Arabidopsis thaliana. DOI: 10.1186/1471-2229-13-229 ; PMID: 24377444
- Functional diversification within the family of B-GATA transcription factors through the leucine-leucine-methionine domain. DOI: 10.1104/pp.114.246660 ; PMID: 25077795
- Establishment of Expression in the SHORTROOT-SCARECROW Transcriptional Cascade through Opposing Activities of Both Activators and Repressors. DOI: 10.1016/j.devcel.2016.09.031 ; PMID: 27923776
- Arabidopsis transcription factors: genome-wide comparative analysis among eukaryotes. DOI: 10.1126/science.290.5499.2105 ; PMID: 11118137
Gene Resources
- UniProt: Q0WPA1
- EMBL: AK229178
- AlphaFoldDB: Q0WPA1
- EnsemblPlants: AT3G16870.1
- Gramene: AT3G16870.1
- KEGG: ath:AT3G16870
- Orthologous matrix: GMRSEEK
- ExpressionAtlas: AT3G16870
Homologs
- Brassica napus GSBRNA2T00057568001, GSBRNA2T00137510001, GSBRNA2T00123895001, GSBRNA2T00153792001, GSBRNA2T00007661001, GSBRNA2T00101895001
- Brassica oleracea XP_013626140.1, XP_013639228.1, XP_013586645.1
- Brassica rapa XP_009114215.1, XP_009146054.1
- Raphanus raphanistrum RrC1635_p2, RrC32435_p1
Sequences
cDNA Sequence
- >AT3G16870.1
CTCGAGGGTATTTTAGTCAATTCAAATAACCCGAAATACTAGGGTTTCCGCCCCCGCCTTCCTCCTCAATTATAAAATTCCTCTCCGTTTGTTTAATTCTGTTGCTACTAACCGCCGTCTCTCTCTCTCTCCCTCTTCCTTATCATCAAAACTTGCTCTGCTCCGATCTCTTAAAAAAAAAAAGATGTCTGAGGGATCAGAAGATACGAAAACAAAACTCGACTCTGCCGGAGAGTTATCAGATGTTGATAACGAGAACTGCAGTAGCAGCGGAAGTGGCGGTGGTAGTAGTTCTGGTGATACCAAAAGGACTTGCGTTGATTGCGGAACTATCCGAACTCCTCTTTGGCGTGGTGGTCCTGCCGGACCAAAGTCATTGTGCAATGCTTGTGGGATCAAGAGTAGGAAGAAGAGACAAGCAGCACTTGGTATGAGATCAGAGGAGAAGAAGAAGAACAGAAAAAGCAATTGCAATAATGATCTAAACCTCGACCATCGAAACGCCAAGAAATACAAAATCAACATAGTTGATGATGGCAAGATCGACATCGATGATGATCCGAAAATTTGCAATAACAAGCGTAGTAGTAGTAGTAGCAGTAACAAAGGAGTGAGTAAGTTTTTGGATTTAGGGTTTAAAGTACCGGTGATGAAGAGATCAGCGGTTGAGAAGAAGAGGTTATGGAGAAAACTCGGTGAGGAAGAAAGAGCTGCTGTGCTTCTCATGGCTCTCTCTTGTAGCTCTGTTTACGCCTAAGTGTTTCTCTGTATTAGGTCATAATCAAGTGAGAGCGATTTTGATTAACTTAATTAGATAGAGATAATATGTAATGAATGTGTAAGTTCCTAGTTTTTTGGTTCCACTAATGTTTTGTGTTCATTTTCTTGATGAATTCAAATATCAACACTTTTTTTTGGTTCTTAGTCATTCAATGCCATAATAATGAGAATTGGTCTTAATTTTTAGTGCCTCAAATGTCATTCTCTGTGTATGGGCCCATATGGCCCAAGA
CDS Sequence
- >AT3G16870.1
ATGTCTGAGGGATCAGAAGATACGAAAACAAAACTCGACTCTGCCGGAGAGTTATCAGATGTTGATAACGAGAACTGCAGTAGCAGCGGAAGTGGCGGTGGTAGTAGTTCTGGTGATACCAAAAGGACTTGCGTTGATTGCGGAACTATCCGAACTCCTCTTTGGCGTGGTGGTCCTGCCGGACCAAAGTCATTGTGCAATGCTTGTGGGATCAAGAGTAGGAAGAAGAGACAAGCAGCACTTGGTATGAGATCAGAGGAGAAGAAGAAGAACAGAAAAAGCAATTGCAATAATGATCTAAACCTCGACCATCGAAACGCCAAGAAATACAAAATCAACATAGTTGATGATGGCAAGATCGACATCGATGATGATCCGAAAATTTGCAATAACAAGCGTAGTAGTAGTAGTAGCAGTAACAAAGGAGTGAGTAAGTTTTTGGATTTAGGGTTTAAAGTACCGGTGATGAAGAGATCAGCGGTTGAGAAGAAGAGGTTATGGAGAAAACTCGGTGAGGAAGAAAGAGCTGCTGTGCTTCTCATGGCTCTCTCTTGTAGCTCTGTTTACGCCTAA
Protein Sequence
- >AT3G16870.1
MSEGSEDTKTKLDSAGELSDVDNENCSSSGSGGGSSSGDTKRTCVDCGTIRTPLWRGGPAGPKSLCNACGIKSRKKRQAALGMRSEEKKKNRKSNCNNDLNLDHRNAKKYKINIVDDGKIDIDDDPKICNNKRSSSSSSNKGVSKFLDLGFKVPVMKRSAVEKKRLWRKLGEEERAAVLLMALSCSSVYA