Information report for AT3G16860
Gene Details
|
|
Functional Descriptions
- PO:0000084 — plant sperm cell — célula espermática o esperma (Spanish, exact), male gamete (exact), microgamete (exact), 植物精子細胞 (Japanese, exact), sperm nucleus (related), sperm cell (broad)
- PO:0025195 — pollen tube cell — célula del tubo polínico (Spanish, exact), 花粉管細胞 (Japanese, exact)
- PO:0025281 — pollen — polen (Spanish, exact), pollen grain (exact), 花粉 (Japanese, exact)
- GO:0006355 — acts upstream of or within — regulation of DNA-templated transcription
- GO:0009414 — acts upstream of or within — response to water deprivation
- GO:0042742 — acts upstream of or within — defense response to bacterium
- GO:0009867 — acts upstream of or within — jasmonic acid mediated signaling pathway
- GO:0031347 — acts upstream of or within — regulation of defense response
- GO:0009737 — acts upstream of or within — response to abscisic acid
- GO:0050832 — acts upstream of or within — defense response to fungus
- GO:0016020 — located in — membrane
- GO:0005886 — located in — plasma membrane
- GO:0009651 — acts upstream of or within — response to salt stress
- GO:0009409 — acts upstream of or within — response to cold
- GO:0071407 — acts upstream of or within — cellular response to organic cyclic compound
- GO:0010215 — involved in — cellulose microfibril organization
- GO:0009611 — acts upstream of or within — response to wounding
Functional Keywords
Literature and News
- Prediction of glycosylphosphatidylinositol-anchored proteins in Arabidopsis. A genomic analysis. DOI: 10.1104/pp.010884 ; PMID: 12068095
- The COBRA family of putative GPI-anchored proteins in Arabidopsis. A new fellowship in expansion. DOI: 10.1104/pp.007468 ; PMID: 12376623
- Enhancer trapping reveals widespread circadian clock transcriptional control in Arabidopsis. DOI: 10.1104/pp.021006 ; PMID: 12805593
- Identification of glycosylphosphatidylinositol-anchored proteins in Arabidopsis. A proteomic and genomic analysis. DOI: 10.1104/pp.103.021170 ; PMID: 12805588
- SETH1 and SETH2, two components of the glycosylphosphatidylinositol anchor biosynthetic pathway, are required for pollen germination and tube growth in Arabidopsis. DOI: 10.1105/tpc.014407 ; PMID: 14671020
- Phylogenetic profiling of the Arabidopsis thaliana proteome: what proteins distinguish plants from other organisms? DOI: 10.1186/gb-2004-5-8-r53 ; PMID: 15287975
- and darkness-regulated Arabidopsis genes: a focus on calmodulin-like and XTH genes. DOI: 10.1111/j.1469-8137.2004.01238.x ; PMID: 15720654
- Enhanced tolerance to environmental stress in transgenic plants expressing the transcriptional coactivator multiprotein bridging factor 1c. DOI: 10.1104/pp.105.070110 ; PMID: 16244138
- but not monomethylation on histone H3 lysine 36 marks active transcription of genes involved in flowering time regulation and other processes in Arabidopsis thaliana. DOI: 10.1128/MCB.01607-07 ; PMID: 18070919
- Transcriptome analyses show changes in gene expression to accompany pollen germination and tube growth in Arabidopsis. DOI: 10.1104/pp.108.126375 ; PMID: 18775970
- Identification of glycosylphosphatidylinositol-anchored proteins in Arabidopsis. A proteomic and genomic analysis. DOI: 10.1104/pp.103.021170 ; PMID: 12805588
Gene Resources
- UniProt: A0A178VBK2
- EMBL: CACRSJ010000106, LUHQ01000003
- AlphaFoldDB: A0A178VBK2
- EnsemblPlants: AT3G16860.1
- Gramene: AT3G16860.1
- KEGG: ath:AT3G16860
- Orthologous matrix: TLSTCCV
- ExpressionAtlas: AT3G16860
- InterPro: IPR006918
- PANTHER: PTHR31052, PTHR31052:SF18
Sequences
cDNA Sequence
- >AT3G16860.1
CGGACATAAATTTTCATTACAGCGTCTTACTAAGCTGTTCTGTTCTTTAACGCGGTCTCTTCCTCTCTTCAAAATTAAACTTCCGATTTTTCACCTTTTCATTTCCAGAATTTGTTTTTTAAAAAAGAGATTTTTGTGAGTGAAGAGATTTAGAGTAATCATGGGTTTAACTCGAAATTTCATTTTATGGATTCTTTTGTCATCTCTCTTCACGGCGATTCAACTAACGTCGTCTCAACGCAACACTCCACCACCACGCTCTAAAGACGCCGATCTCTGCAACGGCGTGTTCGTTTCCTACACTTACTTAACCGGTACCAAGATTAAACCAAACGACACGAAGAACCAGCCGTACCGGTTCGAATCAGAGATCACGGTCCTAAACAACGGCCGCGACGAGCTTAAATCGTGGCAAGTCTTTGTTAAATTCGCCCACCGCGAGATTCTTGTTTCAGCGACCAACGCTGTTCTCTCTGACGGTTCTAGCCTCCCGGCTAGCGTTGAGAACGGGACAATCTTCGCCGGGTTTCCATCGGCGGATTTGAAGACGGCGATCATGACGGCCGGCGACGTAACTCAGATGGAAGCACGTGTTGAGCTCGTGGGTACTCAGTTTGGAGTTGCTCCGCCGAGTGTTCCGCTTCCGAAGAACATCACTCTTGTTAATGATGGATGGTCTTGTCCTAAACCCACTCAACAAGGTAGTAATGTTCTGCAAGTATGTTGCACACCGAATCCGAACATTACAACAAGCAAAATTGGTCAAAAGTTCCTTCCTAGGCAAGAAGGAGATCTAACCATAATGTACGATGTGACCAGAGCATATCAGTCGAGTTACTCAGCGCAGGTCACTATCGAGAATCATAACCTGCTTGGTCGGCTTGACAATTGGGATCTAAGTTTTATGTGGATGAAAGATGAGTTTCTCTTCTCAACCAAAGGAGCTTATCCAAGTGTTGTCGATTCGTCGGATTGCATCACTGGTCCTCAAGCAAAATACTATAAAGATCTTGACTTCTCTAATGTCATGAGCTGTGCAAGAAGGCCACACATCATAGACCTACCCCTGACTAAGTATAACGATACCAATGTCGGGCGTATCCCATACTGCTGCAGAAATGGAACTATTCTGCCACGGTCCATGGATCCAGAGAAGTCTAAATCGGTTTTTCAAATAGAAGTTTACAAAATGCCTCCTGATCTCAACATCTCCTCTATAACACCTCCCCAGAGCTGGCAGATTAAAGGTAACCTTAACCCGGATTACAAATGTGGCCCTCCTCTTCGTGTCAGCTCAAGCCAGTTCCCTGATACAAGCGGTTTGCCTTCAAACAAGAGTGCATTTGCTAGCTGGCAAGTCGTCTGCAACATCACTCAACCAACTCCTCCTAAATGCTGCGTCTCATTCTCTTCTTATTTCAATGACTCAGTAATCCCGTGTAAGACCTGCGCTTGTGGAGGTTGCTCTAGCGACAGAGTGGCGCGTACTTGCAGCACAACTTCTCCAGCTCTTCCTCTTCCATATCAGGCTCTTCTAATTCCATTTGACAACCGAACCAAACTTACCAACGCTTGGGCAGTGTTAAAAAACCGGAAAGTCCCGGACCCATTACCTTGTGGAGATAACTGTGGAGTCAGCATAAACTGGCACCTAGCTACAGACTATCGAGGCGGATGGACTGCTCGAGTCACACTCTTCAACTGGGGTGATACTGATTTCGTGGATTGGTTTACCGCGGTTGAACTGAGAAATGCTGCACCCGGTTTTCAGAAAGCGTACTCGTTTAACGGAAGTATCATCGCGGTCAACGGGAAGAACACAACTGTTTTAATGGAAGGGCTCCCTGGACTGAACTATCTCCTTGCAGAGAAAGACGGAAAAAACCCGAGTGAAGACTTTCGGATACCCGGGAAACAGCAGTCGGTTATCTCCTTCACCAAGAAACTGACTCCTGGAATCAAAGTTGGTTCCAAAGATGGGTTTCCCACCAAAGTACTCTTCAACGGCCAGGAATGTTCACTCCCTTCTGTACTACCCACGAGCAACAGTCACAGGAAACATGTATCCACCTTTCTTCTCATCCTGACACCATTTTTGGCTCTACTGTTTCTTCGGATTTAAAAGTTCCAGTGAAGGACTTTCCTCATTAGCCAGAAAATATACAGTTTTCTTGATTCTTTCTAACCAGATTTGATGCAGAATTACTTCTACTACTAGTGGTGCTTTGTGCACCGTGTGATTCTTGAATTTCGTATGATCAGATTTTAGTAATCAGTATGTATACATACAAATATTGAACAGACAAATCCCTTTGTGTTTTGATCTTGAATTGCTTTGATTTCACGTTGTGGCGTTGTACTAAATTAAGTTTGTTCGAATTATTCTAAGC
CDS Sequence
- >AT3G16860.1
ATGGGTTTAACTCGAAATTTCATTTTATGGATTCTTTTGTCATCTCTCTTCACGGCGATTCAACTAACGTCGTCTCAACGCAACACTCCACCACCACGCTCTAAAGACGCCGATCTCTGCAACGGCGTGTTCGTTTCCTACACTTACTTAACCGGTACCAAGATTAAACCAAACGACACGAAGAACCAGCCGTACCGGTTCGAATCAGAGATCACGGTCCTAAACAACGGCCGCGACGAGCTTAAATCGTGGCAAGTCTTTGTTAAATTCGCCCACCGCGAGATTCTTGTTTCAGCGACCAACGCTGTTCTCTCTGACGGTTCTAGCCTCCCGGCTAGCGTTGAGAACGGGACAATCTTCGCCGGGTTTCCATCGGCGGATTTGAAGACGGCGATCATGACGGCCGGCGACGTAACTCAGATGGAAGCACGTGTTGAGCTCGTGGGTACTCAGTTTGGAGTTGCTCCGCCGAGTGTTCCGCTTCCGAAGAACATCACTCTTGTTAATGATGGATGGTCTTGTCCTAAACCCACTCAACAAGGTAGTAATGTTCTGCAAGTATGTTGCACACCGAATCCGAACATTACAACAAGCAAAATTGGTCAAAAGTTCCTTCCTAGGCAAGAAGGAGATCTAACCATAATGTACGATGTGACCAGAGCATATCAGTCGAGTTACTCAGCGCAGGTCACTATCGAGAATCATAACCTGCTTGGTCGGCTTGACAATTGGGATCTAAGTTTTATGTGGATGAAAGATGAGTTTCTCTTCTCAACCAAAGGAGCTTATCCAAGTGTTGTCGATTCGTCGGATTGCATCACTGGTCCTCAAGCAAAATACTATAAAGATCTTGACTTCTCTAATGTCATGAGCTGTGCAAGAAGGCCACACATCATAGACCTACCCCTGACTAAGTATAACGATACCAATGTCGGGCGTATCCCATACTGCTGCAGAAATGGAACTATTCTGCCACGGTCCATGGATCCAGAGAAGTCTAAATCGGTTTTTCAAATAGAAGTTTACAAAATGCCTCCTGATCTCAACATCTCCTCTATAACACCTCCCCAGAGCTGGCAGATTAAAGGTAACCTTAACCCGGATTACAAATGTGGCCCTCCTCTTCGTGTCAGCTCAAGCCAGTTCCCTGATACAAGCGGTTTGCCTTCAAACAAGAGTGCATTTGCTAGCTGGCAAGTCGTCTGCAACATCACTCAACCAACTCCTCCTAAATGCTGCGTCTCATTCTCTTCTTATTTCAATGACTCAGTAATCCCGTGTAAGACCTGCGCTTGTGGAGGTTGCTCTAGCGACAGAGTGGCGCGTACTTGCAGCACAACTTCTCCAGCTCTTCCTCTTCCATATCAGGCTCTTCTAATTCCATTTGACAACCGAACCAAACTTACCAACGCTTGGGCAGTGTTAAAAAACCGGAAAGTCCCGGACCCATTACCTTGTGGAGATAACTGTGGAGTCAGCATAAACTGGCACCTAGCTACAGACTATCGAGGCGGATGGACTGCTCGAGTCACACTCTTCAACTGGGGTGATACTGATTTCGTGGATTGGTTTACCGCGGTTGAACTGAGAAATGCTGCACCCGGTTTTCAGAAAGCGTACTCGTTTAACGGAAGTATCATCGCGGTCAACGGGAAGAACACAACTGTTTTAATGGAAGGGCTCCCTGGACTGAACTATCTCCTTGCAGAGAAAGACGGAAAAAACCCGAGTGAAGACTTTCGGATACCCGGGAAACAGCAGTCGGTTATCTCCTTCACCAAGAAACTGACTCCTGGAATCAAAGTTGGTTCCAAAGATGGGTTTCCCACCAAAGTACTCTTCAACGGCCAGGAATGTTCACTCCCTTCTGTACTACCCACGAGCAACAGTCACAGGAAACATGTATCCACCTTTCTTCTCATCCTGACACCATTTTTGGCTCTACTGTTTCTTCGGATTTAA
Protein Sequence
- >AT3G16860.1
MGLTRNFILWILLSSLFTAIQLTSSQRNTPPPRSKDADLCNGVFVSYTYLTGTKIKPNDTKNQPYRFESEITVLNNGRDELKSWQVFVKFAHREILVSATNAVLSDGSSLPASVENGTIFAGFPSADLKTAIMTAGDVTQMEARVELVGTQFGVAPPSVPLPKNITLVNDGWSCPKPTQQGSNVLQVCCTPNPNITTSKIGQKFLPRQEGDLTIMYDVTRAYQSSYSAQVTIENHNLLGRLDNWDLSFMWMKDEFLFSTKGAYPSVVDSSDCITGPQAKYYKDLDFSNVMSCARRPHIIDLPLTKYNDTNVGRIPYCCRNGTILPRSMDPEKSKSVFQIEVYKMPPDLNISSITPPQSWQIKGNLNPDYKCGPPLRVSSSQFPDTSGLPSNKSAFASWQVVCNITQPTPPKCCVSFSSYFNDSVIPCKTCACGGCSSDRVARTCSTTSPALPLPYQALLIPFDNRTKLTNAWAVLKNRKVPDPLPCGDNCGVSINWHLATDYRGGWTARVTLFNWGDTDFVDWFTAVELRNAAPGFQKAYSFNGSIIAVNGKNTTVLMEGLPGLNYLLAEKDGKNPSEDFRIPGKQQSVISFTKKLTPGIKVGSKDGFPTKVLFNGQECSLPSVLPTSNSHRKHVSTFLLILTPFLALLFLRI