Gene Details:

• Gene ID: AT3G16850
• Gene Symbol: PGF5
• Gene Name: Polygalacturonase Clade F 5
• Description: Pectin lyase-like superfamily protein;(source:Araport11)
• TAIR Accession: locus:2086740
• Genome: Araport11_genome_release
• Species: Arabidopsis thaliana

Transcripts:

• AT3G16850.1

Gene Ontology:

• GO:0004650  — enables — polygalacturonase activity
• GO:0033993  — acts upstream of or within — response to lipid
• GO:0040007  — acts upstream of or within — growth
• GO:0044255  — acts upstream of or within — cellular lipid metabolic process
• GO:0005576  — located in — extracellular region
• GO:0008610  — acts upstream of or within — lipid biosynthetic process
• GO:0000325  — located in — plant-type vacuole
• GO:0014070  — acts upstream of or within — response to organic cyclic compound
• GO:0030154  — acts upstream of or within — cell differentiation
• GO:0099503  — located in — secretory vesicle
• GO:0005975  — involved in — carbohydrate metabolic process

Literature:

• The vegetative vacuole proteome of Arabidopsis thaliana reveals predicted and unexpected proteins.   DOI:  10.1105/tpc.104.027078 ;  PMID:  15539469
• Patterns of expansion and expression divergence in the plant polygalacturonase gene family.   DOI:  10.1186/gb-2006-7-9-r87 ;  PMID:  17010199
• Rhizobacterial volatile emissions regulate auxin homeostasis and cell expansion in Arabidopsis.   DOI:  10.1007/s00425-007-0530-2 ;  PMID:  17497164
• GeneCAT–novel webtools that combine BLAST and co-expression analyses.   DOI:  10.1093/nar/gkn292 ;  PMID:  18480120
• Global analysis of Arabidopsis gene expression uncovers a complex array of changes impacting pathogen response and cell cycle during geminivirus infection.   DOI:  10.1104/pp.108.121038 ;  PMID:  18650403
• Transcriptional profiling of mature Arabidopsis trichomes reveals that NOECK encodes the MIXTA-like transcriptional regulator MYB106.   DOI:  10.1104/pp.108.126979 ;  PMID:  18805951
• A new picture of cell wall protein dynamics in elongating cells of Arabidopsis thaliana: confirmed actors and newcomers.   DOI:  10.1186/1471-2229-8-94 ;  PMID:  18796151
• Differentiation of Arabidopsis guard cells: analysis of the networks incorporating the basic helix-loop-helix transcription factor, FAMA.   DOI:  10.1104/pp.110.167718 ;  PMID:  21245191
• The pectin lyases in Arabidopsis thaliana: evolution, selection and expression profiles.   DOI:  10.1371/journal.pone.0046944 ;  PMID:  23056537
• The exogenous application of AtPGLR, an endo-polygalacturonase, triggers pollen tube burst and repair.   DOI:  10.1111/tpj.14753 ;  PMID:  32215973
• Biochemical characterization of Arabidopsis clade F polygalacturonase shows a substrate preference toward oligogalacturonic acids.   DOI:  10.1016/j.jbiosc.2021.08.007 ;  PMID:  34690060
• The vegetative vacuole proteome of Arabidopsis thaliana reveals predicted and unexpected proteins.   DOI:  10.1105/tpc.104.027078 ;  PMID:  15539469
• A sub-proteome of Arabidopsis thaliana mature stems trapped on Concanavalin A is enriched in cell wall glycoside hydrolases.   DOI:  10.1093/jxb/erm082 ;  PMID:  17526915
• Analysis of protein complexes in Arabidopsis leaves using size exclusion chromatography and label-free protein correlation profiling.   DOI:  10.1016/j.jprot.2017.06.004 ;  PMID:  28627464

Sequences: