Information report for AT3G16830
Gene Details
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Functional Descriptions
- PO:0000084 — plant sperm cell — célula espermática o esperma (Spanish, exact), male gamete (exact), microgamete (exact), 植物精子細胞 (Japanese, exact), sperm nucleus (related), sperm cell (broad)
- GO:0005515 — enables — protein binding
- GO:0010072 — acts upstream of or within — primary shoot apical meristem specification
- GO:0006355 — involved in — regulation of DNA-templated transcription
- GO:0005737 — located in — cytoplasm
- SALK_079848C — Seedlings screened in bulk via high throughput methods for responses to various stressors. Results are in comparison to Col-0.heat:ND,cold:ND,oxidative stress:ND,osmotic stress:ND,salt stress:ND,ABA:ND,hypoxia:ND.
- sfr1-4 tpr2-2 — small plant
Functional Keywords
Literature and News
- Cold-inducible zinc finger-containing glycine-rich RNA-binding protein contributes to the enhancement of freezing tolerance in Arabidopsis thaliana. DOI: 10.1111/j.1365-313X.2005.02420.x ; PMID: 15941401
- The role of a zinc finger-containing glycine-rich RNA-binding protein during the cold adaptation process in Arabidopsis thaliana. DOI: 10.1093/pcp/pcj047 ; PMID: 16608866
- TOPLESS regulates apical embryonic fate in Arabidopsis. DOI: 10.1126/science.1123841 ; PMID: 16763149
- Global analysis of Arabidopsis gene expression uncovers a complex array of changes impacting pathogen response and cell cycle during geminivirus infection. DOI: 10.1104/pp.108.121038 ; PMID: 18650403
- NINJA connects the co-repressor TOPLESS to jasmonate signalling. DOI: 10.1038/nature08854 ; PMID: 20360743
- Functional compensation of primary and secondary metabolites by duplicate genes in Arabidopsis thaliana. DOI: 10.1093/molbev/msq204 ; PMID: 20736450
- Organizer-Derived WOX5 Signal Maintains Root Columella Stem Cells through Chromatin-Mediated Repression of CDF4 Expression. DOI: 10.1016/j.devcel.2015.04.024 ; PMID: 26028217
- Strigolactone Signaling in Arabidopsis Regulates Shoot Development by Targeting D53-Like SMXL Repressor Proteins for Ubiquitination and Degradation. DOI: 10.1105/tpc.15.00605 ; PMID: 26546446
- ABI5-binding proteins (AFPs) alter transcription of ABA-induced genes via a variety of interactions with chromatin modifiers. DOI: 10.1007/s11103-016-0569-1 ; PMID: 27942958
- ABI5-BINDING PROTEIN2 Coordinates CONSTANS to Delay Flowering by Recruiting the Transcriptional Corepressor TPR2. DOI: 10.1104/pp.18.00865 ; PMID: 30514725
- Arabidopsis ECAP Is a New Adaptor Protein that Connects JAZ Repressors with the TPR2 Co-repressor to Suppress Jasmonate-Responsive Anthocyanin Accumulation. DOI: 10.1016/j.molp.2019.10.014 ; PMID: 31706031
- Opposing functions of the plant TOPLESS gene family during SNC1-mediated autoimmunity. DOI: 10.1371/journal.pgen.1009026 ; PMID: 33621240
- bHLH11 inhibits bHLH IVc proteins by recruiting the TOPLESS/TOPLESS-RELATED corepressors. DOI: 10.1093/plphys/kiab540 ; PMID: 34894263
- ECAP is a key negative regulator mediating different pathways to modulate salt stress-induced anthocyanin biosynthesis in Arabidopsis. DOI: 10.1111/nph.17937 ; PMID: 34942029
- A transcription factor WRKY36 interacts with AFP2 to break primary seed dormancy by progressively silencing DOG1 in Arabidopsis. DOI: 10.1111/nph.18750 ; PMID: 36653950
Gene Resources
- UniProt: A0A178VCB7
- EMBL: CACRSJ010000106, CACSHJ010000089, LUHQ01000003
- AlphaFoldDB: A0A178VCB7
- EnsemblPlants: AT3G16830.1
- Gramene: AT3G16830.1
- KEGG: ath:AT3G16830
- Orthologous matrix: FHNDQIQ
- ExpressionAtlas: AT3G16830
- InterPro: IPR001680, IPR006594, IPR006595
- PANTHER: PTHR44083, PTHR44083:SF24
- SUPFAM: SSF50978, SSF50998
- PROSITE: PS00678, PS50082, PS50294
- Gene3D: 2.130.10.10
- OrthoDB: A0A178VCB7
Homologs
- Glycine max Glyma.08G214600
- Malus domestica TPL4
- Manihot esculenta MANES_09G124300
- Medicago truncatula Medtr4g009840
- Musa acuminata Ma04_g12340, Ma01_g08850, Ma04_g09920, Ma04_g11560
- Nicotiana attenuata A4A49_21987
- Oryza sativa ASPR1;OsTRP1, OsTPL;ASP1
- Sesamum indicum SIN_1021914, SIN_1013829
- Solanum lycopersicum Solyc08g076030.3
- Vitis vinifera VIT_16s0039g02410
Sequences
cDNA Sequence
- >AT3G16830.1
AGCATCTCTGGGGTCAGCTTTTTCTTAATGTTCGCTTTGCGACGCGAGGAAATGCAACCTTGAAACCCTAGAAAACTCATTCTCAACTACGACTAAATCGATTTCGCAAACTTTGACCTACCCTTCTTTCACGATAAACCCAGATCGCTTAAATTCCTTGAATTTCTTCTTCTGAGAGTTTTAGGAAAAAATGTCGTCTTTGAGCAGAGAGTTAGTTTTCTTAATTCTCCAGTTCTTAGATGAGGAGAAGTTCAAGGAATCTGTTCACAAGCTAGAGCAAGAATCTGGCTTCTTCTTTAACATTAAGTACTTTGAAGAGAAAGCTCTTGCTGGAGAGTGGGATGAAGTGGAGAAGTATCTTTCTGGTTTCACTAAAGTCGATGATAATCGTTACTCTATGAAAATCTTCTTTGAGATTAGGAAGCAAAAGTATCTCGAAGCTCTAGATCGAAATGACAGAGCAAAAGCTGTTGAGATATTAGCCAAAGACTTGAAAGTTTTCGCTACATTTAACGAGGAGCTTTACAAGGAGATTACTCAGCTGCTTACTCTGGAGAATTTTAGGGAAAATGAGCAACTGTCGAAATATGGTGATACTAAATCTGCAAGGTCTATAATGTATACTGAGTTGAAGAAATTGATTGAGGCGAATCCTCTGTTTCGAGAGAAGCTAGCCTTCCCCAGTTTCAAAGCTTCTCGCCTGCGAACTTTGATCAATCAAAGCTTAAACTGGCAGCATCAGCTATGTAAAAATCCAAGGCCTAATCCTGACATCAAGACATTGTTCTTGGATCACTCTTGCTCACCATCAAACGGTGCTCGTGCACTCACTCCTGTCAATCTTCCAGTTGCTGCTGTTGCAAGACCTTCAAACTTTGTTCCTCTTGGAGTGCATGGTGGACCCTTTCAATCTAATCCTGCTCCGGCTCCTAATGCCAATGCTTTAGCTGGATGGATGGCAAACCCAAATCCTTCTTCATCAGTTCCATCTGGTGTTGTCGCTGCTTCCCCATTTCCTATGCAGCCAAGTCAAGTTAATGAGCTGAAACACCCTCGGGCACCGTCTAACTCTCTAGGATTAATGGATTATCAAAGTGCTGATCACGAGCAACTCATGAAACGCTTACGGTCTGCACAAACATCCAACGAGGTCACATATCCTGCTCATTCTCATCCCCCTGCGTCACTTGATGACCTCCCTAGAAATGTAGTGAGTACAATTCGCCAAGGGTCGGTGGTGATAAGCATGGATTTTCACCCTTCTCATCACACTTTGCTCGCTGTTGGTTGTTCAAGCGGCGAAGTCACCTTGTGGGAAGTTGGATCCAGAGAAAAGGTTGTCACAGAACCTTTCAAGATATGGAATATGGCGGCTTGTTCTGTGATCTTCCAGGGTTCTATAGTCAAAGAGCCATCGATATCCGTCACTCGTGTAGCATGGAGCCCAGATGGAAACTTGCTTGGGGTTTCTTTTACTAAACATCTGATCCATGTATATGCTTACCAAGGCTCAGACCTACGTCAACACCTCGAGATTGATGCTCATGTAGGCTGTGTGAATGACTTGGCGTTCGCCCACCCAAATAAGCAAATGTGTGTTGTGACTTGTGGGGATGACAAATTGATTAAGGTGTGGGATTTGAGTGGGAAGAAGCTCTTCACCTTTGAAGGGCACGAGGCACCAGTTTATTCCATTTGCCCTCACCAGAAGGAAAATATTCAGTTTATATTCTCAACCGCTCTTGATGGAAAGATCAAGGCGTGGCTCTATGATAATGTTGGTTCTCGGGTTGATTATGACGCACCGGGACAGTGGTGTACAACAATGCTCTACAGTGCTGATGGAAGCAGACTATTTTCTTGTGGGACGAGTAAAGAAGGAGACTCTTTCCTCGTCGAGTGGAATGAGAGTGAAGGTGCCCTAAAGAGGACATATTTAGGCTTTAGGAAGAAATCAGCTGGAGTTGTTCAGTTTGATACAACCCGTAACCGTTTCTTGGCTGTTGGTGAAGACAATCAAATAAAATTCTGGAACATGGACAATACAAATCTTTTGACAGTTGTTGAGGCTGAAGGTGGACTTCCGAATCTACCCCGATTGAGATTCAACAAGGATGGGAATCTTCTTGCAGTTACTACAGCAGATAATGGATTCAAGATCCTTGCAAATACTGATGGTCTCAGAACCTTAAGAGCATTTGAAGCGCGGTCTTTTGAAGCATCTAAAGCATCCATTGATATGAAGGTATCCACCTCCGCAATGGCTTCAAGCATCAGCCCCGCTATTGGTAAAATTGAACACATGGACGCAGGCTCTCCTGCAAGGCCAACCCCAATTCCTAATGGAATTGAGGCAATGTCAAGAACTATGGAAAAGCCAAGAAACTTGGACTCTGTTGATAAGTCTAAACCTTTAGAGCTCACAGAAATTGTTGATCCGACTCAGTGCCGACAAGTGACAATGCCAGATAGCAAGGACTCTGTTAGCAAGGTTGCTCGGCTTCTTTACACAAATTCTGGCGTTGGTGTTTTGGCTCTTGGATCAAATGGTGTTCAAAGACTATGGAAGTGGATCCGCAATGAGCAAAATCCAACTGGGAAGGCAACTGCTAGTGTAACTCCACAGCATTGGCAGCCAAACAGCGGTCTCCTAATGGCAAATGATGTTCCCGAGAATCCTGAAGGGAGTGTTCCGTGTATAGCACTTTCCAAGAATGACTCATACGTAATGTCAGCTTGTGGTGGAAAGGTTTCGTTATTCAATATGATGACTTTCAAAGTAATGACAACTTTCATGCCACCGCCACCAGCTTCAACTTTCTTGGCATTTCATCCTCAAGATAATAATATTATTGCAATCGGGATGGAGGACTCGAGTATACATATTTACAACGTCAGGGTAGATGAGGTGAAAACAAAGTTGAAAGGTCACCAGAAGCACATAACTGGTCTAGCATTCTCTACCGCGCTCAATATTCTTGTCTCTTCTGGTGCCGATGCTCAGCTCTTCTTCTGGACCGCTGACTCGTGGGAGAAAAAGAAATCTTCAGCGATACAGCTACCACCTGGCAAAGCACCAGTAGGCGACACACGAGTCCAATTCCACAACGACCAAATCCAGTTATTGGTTTCACATGAGACACAGCTCGCCATTTACGATGCTTCGAAGATGGAATGCATTCATAAGTGGGTGCCCCAAGAAGCTCTCTCTTCGCCCATAACCTCTGCATCTTACTCATGCAACAGCCAACTGGTTTACGCGTCATTCGCTGATGGAAACATTGCAGTCTTTGATGCTGAATCCTTGAGACTCAGATGCCGCATTGCCCCATCAGCCTACATGCCTCAACCTACACCAAACAGTGCACCGATTTTCCCACAGGTGATCACAGCTCATCCACAAGAACCGAATCAATTAGCGGTTGGACTGTCTGATGGTTCGGTTAAAGTGATTGAGCCATCAGAACTTTCTAGAAGATGGGGTGTTGGCGTCGCAGCTGGTTCAGATAAAGCAGGGACTGAAAATGGACGGCCGTCTAGTTCATCAGCGGCTAACAACTCAAGTTCGGATCAGATTCAAAGGTAAAAATAGTTTATGTCAGTTAAGTTAGTTGACATATCTCTTGTTATTTTGGATTGTAAAGTTGTGATAGCTTGTGCTGTTTTTGTAAATGAGATTCTCAAATTAAATCAGTAGGCGCAATAACAGTTTATTTTATATTTTTCGGCGTTTTAACAGTTTTAAGATGGCTATACTCTTGAATGTAGTAGCTCTTAAATCTATGGATTTGTCAAAAATTTGCGATTTACGCGTTTATATTTCGGCCGTCTGATTTGTCCAACATATTCATATTTCGTTTGTGGCCAATGTTGAAATGAGTTTCATCTAAATATCCCCTAAACTAAATT
CDS Sequence
- >AT3G16830.1
ATGTCGTCTTTGAGCAGAGAGTTAGTTTTCTTAATTCTCCAGTTCTTAGATGAGGAGAAGTTCAAGGAATCTGTTCACAAGCTAGAGCAAGAATCTGGCTTCTTCTTTAACATTAAGTACTTTGAAGAGAAAGCTCTTGCTGGAGAGTGGGATGAAGTGGAGAAGTATCTTTCTGGTTTCACTAAAGTCGATGATAATCGTTACTCTATGAAAATCTTCTTTGAGATTAGGAAGCAAAAGTATCTCGAAGCTCTAGATCGAAATGACAGAGCAAAAGCTGTTGAGATATTAGCCAAAGACTTGAAAGTTTTCGCTACATTTAACGAGGAGCTTTACAAGGAGATTACTCAGCTGCTTACTCTGGAGAATTTTAGGGAAAATGAGCAACTGTCGAAATATGGTGATACTAAATCTGCAAGGTCTATAATGTATACTGAGTTGAAGAAATTGATTGAGGCGAATCCTCTGTTTCGAGAGAAGCTAGCCTTCCCCAGTTTCAAAGCTTCTCGCCTGCGAACTTTGATCAATCAAAGCTTAAACTGGCAGCATCAGCTATGTAAAAATCCAAGGCCTAATCCTGACATCAAGACATTGTTCTTGGATCACTCTTGCTCACCATCAAACGGTGCTCGTGCACTCACTCCTGTCAATCTTCCAGTTGCTGCTGTTGCAAGACCTTCAAACTTTGTTCCTCTTGGAGTGCATGGTGGACCCTTTCAATCTAATCCTGCTCCGGCTCCTAATGCCAATGCTTTAGCTGGATGGATGGCAAACCCAAATCCTTCTTCATCAGTTCCATCTGGTGTTGTCGCTGCTTCCCCATTTCCTATGCAGCCAAGTCAAGTTAATGAGCTGAAACACCCTCGGGCACCGTCTAACTCTCTAGGATTAATGGATTATCAAAGTGCTGATCACGAGCAACTCATGAAACGCTTACGGTCTGCACAAACATCCAACGAGGTCACATATCCTGCTCATTCTCATCCCCCTGCGTCACTTGATGACCTCCCTAGAAATGTAGTGAGTACAATTCGCCAAGGGTCGGTGGTGATAAGCATGGATTTTCACCCTTCTCATCACACTTTGCTCGCTGTTGGTTGTTCAAGCGGCGAAGTCACCTTGTGGGAAGTTGGATCCAGAGAAAAGGTTGTCACAGAACCTTTCAAGATATGGAATATGGCGGCTTGTTCTGTGATCTTCCAGGGTTCTATAGTCAAAGAGCCATCGATATCCGTCACTCGTGTAGCATGGAGCCCAGATGGAAACTTGCTTGGGGTTTCTTTTACTAAACATCTGATCCATGTATATGCTTACCAAGGCTCAGACCTACGTCAACACCTCGAGATTGATGCTCATGTAGGCTGTGTGAATGACTTGGCGTTCGCCCACCCAAATAAGCAAATGTGTGTTGTGACTTGTGGGGATGACAAATTGATTAAGGTGTGGGATTTGAGTGGGAAGAAGCTCTTCACCTTTGAAGGGCACGAGGCACCAGTTTATTCCATTTGCCCTCACCAGAAGGAAAATATTCAGTTTATATTCTCAACCGCTCTTGATGGAAAGATCAAGGCGTGGCTCTATGATAATGTTGGTTCTCGGGTTGATTATGACGCACCGGGACAGTGGTGTACAACAATGCTCTACAGTGCTGATGGAAGCAGACTATTTTCTTGTGGGACGAGTAAAGAAGGAGACTCTTTCCTCGTCGAGTGGAATGAGAGTGAAGGTGCCCTAAAGAGGACATATTTAGGCTTTAGGAAGAAATCAGCTGGAGTTGTTCAGTTTGATACAACCCGTAACCGTTTCTTGGCTGTTGGTGAAGACAATCAAATAAAATTCTGGAACATGGACAATACAAATCTTTTGACAGTTGTTGAGGCTGAAGGTGGACTTCCGAATCTACCCCGATTGAGATTCAACAAGGATGGGAATCTTCTTGCAGTTACTACAGCAGATAATGGATTCAAGATCCTTGCAAATACTGATGGTCTCAGAACCTTAAGAGCATTTGAAGCGCGGTCTTTTGAAGCATCTAAAGCATCCATTGATATGAAGGTATCCACCTCCGCAATGGCTTCAAGCATCAGCCCCGCTATTGGTAAAATTGAACACATGGACGCAGGCTCTCCTGCAAGGCCAACCCCAATTCCTAATGGAATTGAGGCAATGTCAAGAACTATGGAAAAGCCAAGAAACTTGGACTCTGTTGATAAGTCTAAACCTTTAGAGCTCACAGAAATTGTTGATCCGACTCAGTGCCGACAAGTGACAATGCCAGATAGCAAGGACTCTGTTAGCAAGGTTGCTCGGCTTCTTTACACAAATTCTGGCGTTGGTGTTTTGGCTCTTGGATCAAATGGTGTTCAAAGACTATGGAAGTGGATCCGCAATGAGCAAAATCCAACTGGGAAGGCAACTGCTAGTGTAACTCCACAGCATTGGCAGCCAAACAGCGGTCTCCTAATGGCAAATGATGTTCCCGAGAATCCTGAAGGGAGTGTTCCGTGTATAGCACTTTCCAAGAATGACTCATACGTAATGTCAGCTTGTGGTGGAAAGGTTTCGTTATTCAATATGATGACTTTCAAAGTAATGACAACTTTCATGCCACCGCCACCAGCTTCAACTTTCTTGGCATTTCATCCTCAAGATAATAATATTATTGCAATCGGGATGGAGGACTCGAGTATACATATTTACAACGTCAGGGTAGATGAGGTGAAAACAAAGTTGAAAGGTCACCAGAAGCACATAACTGGTCTAGCATTCTCTACCGCGCTCAATATTCTTGTCTCTTCTGGTGCCGATGCTCAGCTCTTCTTCTGGACCGCTGACTCGTGGGAGAAAAAGAAATCTTCAGCGATACAGCTACCACCTGGCAAAGCACCAGTAGGCGACACACGAGTCCAATTCCACAACGACCAAATCCAGTTATTGGTTTCACATGAGACACAGCTCGCCATTTACGATGCTTCGAAGATGGAATGCATTCATAAGTGGGTGCCCCAAGAAGCTCTCTCTTCGCCCATAACCTCTGCATCTTACTCATGCAACAGCCAACTGGTTTACGCGTCATTCGCTGATGGAAACATTGCAGTCTTTGATGCTGAATCCTTGAGACTCAGATGCCGCATTGCCCCATCAGCCTACATGCCTCAACCTACACCAAACAGTGCACCGATTTTCCCACAGGTGATCACAGCTCATCCACAAGAACCGAATCAATTAGCGGTTGGACTGTCTGATGGTTCGGTTAAAGTGATTGAGCCATCAGAACTTTCTAGAAGATGGGGTGTTGGCGTCGCAGCTGGTTCAGATAAAGCAGGGACTGAAAATGGACGGCCGTCTAGTTCATCAGCGGCTAACAACTCAAGTTCGGATCAGATTCAAAGGTAA
Protein Sequence
- >AT3G16830.1
MSSLSRELVFLILQFLDEEKFKESVHKLEQESGFFFNIKYFEEKALAGEWDEVEKYLSGFTKVDDNRYSMKIFFEIRKQKYLEALDRNDRAKAVEILAKDLKVFATFNEELYKEITQLLTLENFRENEQLSKYGDTKSARSIMYTELKKLIEANPLFREKLAFPSFKASRLRTLINQSLNWQHQLCKNPRPNPDIKTLFLDHSCSPSNGARALTPVNLPVAAVARPSNFVPLGVHGGPFQSNPAPAPNANALAGWMANPNPSSSVPSGVVAASPFPMQPSQVNELKHPRAPSNSLGLMDYQSADHEQLMKRLRSAQTSNEVTYPAHSHPPASLDDLPRNVVSTIRQGSVVISMDFHPSHHTLLAVGCSSGEVTLWEVGSREKVVTEPFKIWNMAACSVIFQGSIVKEPSISVTRVAWSPDGNLLGVSFTKHLIHVYAYQGSDLRQHLEIDAHVGCVNDLAFAHPNKQMCVVTCGDDKLIKVWDLSGKKLFTFEGHEAPVYSICPHQKENIQFIFSTALDGKIKAWLYDNVGSRVDYDAPGQWCTTMLYSADGSRLFSCGTSKEGDSFLVEWNESEGALKRTYLGFRKKSAGVVQFDTTRNRFLAVGEDNQIKFWNMDNTNLLTVVEAEGGLPNLPRLRFNKDGNLLAVTTADNGFKILANTDGLRTLRAFEARSFEASKASIDMKVSTSAMASSISPAIGKIEHMDAGSPARPTPIPNGIEAMSRTMEKPRNLDSVDKSKPLELTEIVDPTQCRQVTMPDSKDSVSKVARLLYTNSGVGVLALGSNGVQRLWKWIRNEQNPTGKATASVTPQHWQPNSGLLMANDVPENPEGSVPCIALSKNDSYVMSACGGKVSLFNMMTFKVMTTFMPPPPASTFLAFHPQDNNIIAIGMEDSSIHIYNVRVDEVKTKLKGHQKHITGLAFSTALNILVSSGADAQLFFWTADSWEKKKSSAIQLPPGKAPVGDTRVQFHNDQIQLLVSHETQLAIYDASKMECIHKWVPQEALSSPITSASYSCNSQLVYASFADGNIAVFDAESLRLRCRIAPSAYMPQPTPNSAPIFPQVITAHPQEPNQLAVGLSDGSVKVIEPSELSRRWGVGVAAGSDKAGTENGRPSSSSAANNSSSDQIQR