Information report for AT3G16780
Gene Details
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Functional Descriptions
- PO:0000084 — plant sperm cell — célula espermática o esperma (Spanish, exact), male gamete (exact), microgamete (exact), 植物精子細胞 (Japanese, exact), sperm nucleus (related), sperm cell (broad)
- GO:0005829 — located in — cytosol
- GO:0022625 — part of — cytosolic large ribosomal subunit
- GO:0022625 — located in — cytosolic large ribosomal subunit
- GO:0003729 — enables — mRNA binding
- GO:0003723 — enables — RNA binding
- GO:0006412 — involved in — translation
- GO:0016070 — acts upstream of or within — RNA metabolic process
- GO:0005737 — located in — cytoplasm
- GO:0030154 — acts upstream of or within — cell differentiation
- GO:0003735 — enables — structural constituent of ribosome
Functional Keywords
Literature and News
- The organization of cytoplasmic ribosomal protein genes in the Arabidopsis genome. DOI: 6834 ; PMID: 11598216
- Genes encoding calmodulin-binding proteins in the Arabidopsis genome. DOI: 10.1074/jbc.M111626200 ; PMID: 11782485
- A transcriptome-based characterization of habituation in plant tissue culture. DOI: 10.1104/pp.105.076059 ; PMID: 16489130
- The Arabidopsis thaliana transcriptome in response to Agrobacterium tumefaciens. DOI: 10.1094/MPMI-19-0665 ; PMID: 16776300
- Analysis of the Arabidopsis cytosolic ribosome proteome provides detailed insights into its components and their post-translational modification. DOI: 10.1074/mcp.M700052-MCP200 ; PMID: 17934214
- Global analysis of Arabidopsis gene expression uncovers a complex array of changes impacting pathogen response and cell cycle during geminivirus infection. DOI: 10.1104/pp.108.121038 ; PMID: 18650403
- Endogenous Arabidopsis messenger RNAs transported to distant tissues. DOI: 10.1038/nplants.2015.25 ; PMID: 27247031
- Salt hypersensitive mutant 9, a nucleolar APUM23 protein, is essential for salt sensitivity in association with the ABA signaling pathway in Arabidopsis. DOI: 10.1186/s12870-018-1255-z ; PMID: 29490615
- Discovering the RNA-Binding Proteome of Plant Leaves with an Improved RNA Interactome Capture Method. DOI: 10.3390/biom10040661 ; PMID: 32344669
- Plant cytoplasmic ribosomal proteins: an update on classification, nomenclature, evolution and resources. DOI: 10.1111/tpj.15667 ; PMID: 35000252
- An updated nomenclature for plant ribosomal protein genes. DOI: 10.1093/plcell/koac333 ; PMID: 36423343
- Quantitative phosphoproteomics of early elicitor signaling in Arabidopsis. DOI: 10.1074/mcp.M600429-MCP200 ; PMID: 17317660
- Analysis of the Arabidopsis cytosolic ribosome proteome provides detailed insights into its components and their post-translational modification. DOI: 10.1074/mcp.M700052-MCP200 ; PMID: 17934214
Gene Resources
- UniProt: A0A654F975
- EMBL: CACRSJ010000106
- AlphaFoldDB: A0A654F975
- EnsemblPlants: AT3G16780.1
- Gramene: AT3G16780.1
- KEGG: ath:AT3G16780
- Orthologous matrix: SIHKMKA
- ExpressionAtlas: AT3G16780
- InterPro: IPR000196, IPR015972, IPR023638
- PANTHER: PTHR10722
- SUPFAM: SSF48140
- PROSITE: PS00526
- Gene3D: 1.10.1200.240, 1.10.1650.10
- SWISS-MODEL: A0A654F975
- Conserved Domain Database: cd01417
Homologs
- Zea mays Zm00001d053865
Sequences
cDNA Sequence
- >AT3G16780.1
TGGGTCTTAACGAAATTGGAGTGGAACTGAAATTAGACCCAAAAACCCTAAAGAATTGATATGTCTTCGATTTATAAGTAGGTCATTTTTTTTTGCCTTAACAAAAAAGCCCTAAACGGAGAGAGGCGGAGAGGAGAAGGAAGACGGCGTGAAGCAATGGTGTCGCTGAAGATCCAGAAGCGGCTCGCCGCATCCGTAATGAAATGCGGGAAAGGAAAAGTTTGGCTCGACCCCAATGAATCGGGCGATATCTCTATGGCCAATTCCAGGCAGAACATTAGGAAGCTTGTGAAGGATGGTTTCATTATCAGGAAGCCTACTAAGATCCACTCACGTTCTCGGGCTAGGGCTTTGAACGAGGCCAAGCGAAAGGGTCGTCACTCTGGATACGGTAAGAGAAAGGGTACAAGAGAGGCAAGGCTACCAACCAAGATTCTTTGGATGAGGAGAATGAGGGTGTTGAGGCGTTTCTTGAGCAAGTACCGTGAGTCAAAGAAGATTGATAGGCACATGTACCATGACATGTACATGAAAGTGAAGGGTAATGTTTTCAAGAACAAGCGTGTGCTTATGGAGAGCATCCACAAGATGAAGGCTGAGAAGGCTAGAGAGAAGACTCTCGCTGACCAGTTTGAGGCCAAGCGTATTAAGAACAAGGCTAGCAGGGAGAGAAAGTTTGCCAGAAGAGAGGAGAGATTAGCTCAGGGACCTGGAGGTGGAGAGACAACGACTCCTGCTGGCGCACCTCAACAACCAGAGGTAACCAAGAAGAAGTCGAAGAAGTGATTTGGTGTTGAACTTTTTTGCAATTGAATCTTTGAGTTTACCTGTAGAAGAAGCGTCTTTTTTTTATCTTTTATATGATTTTGTCGGAGATTCTTTTCTTCAAAAATATTTCTTATGTTATGGATCTCATTGCTTATTATGAATTTCTCAGTTTTGTTTCTCTTTACCTTTTCTCTTTCAATAGTTTCTGATTCCATTGTCTTAAAACATCAAAGAAGTTGAGTAGTATCACACTTCCCAATTTTGGAGTTACTTGTTCAACCATGTATTTAACAAATATGTAAATCCCAATTTGATTAACTTGAGAGTTTAGTATTGGTTTTGACAACA
CDS Sequence
- >AT3G16780.1
ATGGTGTCGCTGAAGATCCAGAAGCGGCTCGCCGCATCCGTAATGAAATGCGGGAAAGGAAAAGTTTGGCTCGACCCCAATGAATCGGGCGATATCTCTATGGCCAATTCCAGGCAGAACATTAGGAAGCTTGTGAAGGATGGTTTCATTATCAGGAAGCCTACTAAGATCCACTCACGTTCTCGGGCTAGGGCTTTGAACGAGGCCAAGCGAAAGGGTCGTCACTCTGGATACGGTAAGAGAAAGGGTACAAGAGAGGCAAGGCTACCAACCAAGATTCTTTGGATGAGGAGAATGAGGGTGTTGAGGCGTTTCTTGAGCAAGTACCGTGAGTCAAAGAAGATTGATAGGCACATGTACCATGACATGTACATGAAAGTGAAGGGTAATGTTTTCAAGAACAAGCGTGTGCTTATGGAGAGCATCCACAAGATGAAGGCTGAGAAGGCTAGAGAGAAGACTCTCGCTGACCAGTTTGAGGCCAAGCGTATTAAGAACAAGGCTAGCAGGGAGAGAAAGTTTGCCAGAAGAGAGGAGAGATTAGCTCAGGGACCTGGAGGTGGAGAGACAACGACTCCTGCTGGCGCACCTCAACAACCAGAGGTAACCAAGAAGAAGTCGAAGAAGTGA
Protein Sequence
- >AT3G16780.1
MVSLKIQKRLAASVMKCGKGKVWLDPNESGDISMANSRQNIRKLVKDGFIIRKPTKIHSRSRARALNEAKRKGRHSGYGKRKGTREARLPTKILWMRRMRVLRRFLSKYRESKKIDRHMYHDMYMKVKGNVFKNKRVLMESIHKMKAEKAREKTLADQFEAKRIKNKASRERKFARREERLAQGPGGGETTTPAGAPQQPEVTKKKSKK