Information report for AT3G16730
Gene Details
|
|
Functional Descriptions
- PO:0000084 — plant sperm cell — célula espermática o esperma (Spanish, exact), male gamete (exact), microgamete (exact), 植物精子細胞 (Japanese, exact), sperm nucleus (related), sperm cell (broad)
- GO:0006974 — involved in — DNA damage response
- GO:0051306 — involved in — mitotic sister chromatid separation
- GO:0010032 — involved in — meiotic chromosome condensation
- GO:0045739 — involved in — positive regulation of DNA repair
- GO:0005634 — located in — nucleus
- GO:0005730 — located in — nucleolus
- GO:0005634 — is active in — nucleus
- GO:0000796 — part of — condensin complex
- GO:0000793 — located in — condensed chromosome
- GO:0003682 — enables — chromatin binding
- SALK_014314C — Seedlings screened in bulk via high throughput methods for responses to various stressors. Results are in comparison to Col-0.heat:no change,cold:no change,oxidative stress:no change,osmotic stress:no change,salt stress:decreased,ABA:no change,hypoxia:no change.
Functional Keywords
Literature and News
- Characterization and dynamic analysis of Arabidopsis condensin subunits, AtCAP-H and AtCAP-H2. DOI: 10.1007/s00425-005-1546-0 ; PMID: 15883832
- Condensin II alleviates DNA damage and is essential for tolerance of boron overload stress in Arabidopsis. DOI: 10.1105/tpc.111.086314 ; PMID: 21917552
- The Arabidopsis condensin CAP-D subunits arrange interphase chromatin. DOI: 10.1111/nph.17221 ; PMID: 33475158
Gene Resources
- UniProt: A0A654F7W9
- EMBL: CACRSJ010000106
- AlphaFoldDB: A0A654F7W9
- EnsemblPlants: AT3G16730.1
- Gramene: AT3G16730.1
- KEGG: ath:AT3G16730
- Orthologous matrix: FDPPEHK
- ExpressionAtlas: AT3G16730
- InterPro: IPR009378, IPR023093, IPR031719
- PANTHER: PTHR14324, PTHR14324:SF3
- Gene3D: 1.10.10.580
- SWISS-MODEL: A0A654F7W9
Sequences
cDNA Sequence
- >AT3G16730.1
AAAATAATTCGTATCTCTCTTTCCCAAAACTCTCAATCTCTCTCTCTCTCTCACAGTTCCTTTCTATCTTCACTAATCACTTGAAATCTTCGTGTTACATCGCACAATCCCTTCGTCTCCCAGAAAAATTTCTCAAATTTCACCACAAAATCAGATATTTCTATTGAAATTTCTCTTTATAGTTGGAATCCCAATTCAGAGTTTTTAGGGTTTCAGCTTTTTCTTTTTGGGGGTTTGGGATTAGGGATATGAATTATCCAATCTCTCCATATAGAAGCTTAAATTCCGTGAGTCTTCACCGAGAATGACCAGTCACGGTGGCGGGGAAGTCCGCGGCGAGAGGATTCATACAGTACAGCCGGAGAGGGATTTGGTGGCTAATTGGGAAGTTGATTTGTCGGAGAAGCTAGAAGAGTACCTCCTCAAAATTTGTTCCGGAGAAATCACTGGAAATGAAGAAGATGGGCAAATTCCTGTGAATTTCGCTGAAGCTGCTTTGCTGCTTCAGGGTTCGGTTCAGGTTTACAGCAAGAAAGTTGAGTACTTGTATAATTTAGTTCTACGTACGTTGGAGTTTCTATCGAAGCAAAGAGACCAGGAACAGTCTAAAGGTACATCAAATGAGAATGAGGCAAGCTCCTCACGTCAGGTTGATGAAGAAGAAAATGATCTCTTCTGGAATGTAGATGACATCCCAGTGGACACAAAGAATAGATTGGACAGTTCGGTTGGCGGAGATACTTGTCCAAGTCAATTTGTCAAGCCTCCAGCGAATCTAGTTGTTCTTGAAGGTGACTGTTTGGATACTAGTGGTGACGGAGGAGAATTGGAATCCTATCTGTTGGCAACTACACATCTCTACCGGGATTTTATACTATTAGACCCATGTGATGCTGTAGCGGTGAATGAATTTTTAGGTGATAACTATGGTGGTAAAGGAAGGAACAGTGCCCACAGAGGCAGCTCAGTTCGTAAAAGCTTTCACTCATCTGTTGGACGTTCTGGAGGAAGTGCTCGTAAGTCATCTGTGGGAAAGAATCAGGGCACCAATGTCCACTTGTCCCCAATATGTGGGAATGGTCCCAATGATCAAAATTGTGACCAAGGGTCTCAGCCTCCTGTTTTTGAAGACAATGATCATGGTTTTGACATGGATAATGAATATGGAGGAGCCATGGATTTTAGTGATACAGATGCTGACGAAGATGATCCGTGGAAGCCATTGAATCCCTATGAACCAGGGAAGTTGAAAGTGAAGCCTTTCAAAAAAGTAAAAATTTTAAAAAAGATTGGATGGAGCATTACCAAGGACCATATGACTTCCATGTTCCCTCTCGCTAGACCAAACGGTCCCATCAGTTCAGAGCTTATTGAAATTTGGAAAATGCACGGTTGTGCTAGTAAAGACGAGCAAGCATCACAAGACATCCCTTATTACGAGAAGCTTCGAGAGATGCTTGTGAATGGAGGAAACCAACCTTGTGGTGCTAACGGCAATTACAATGACAATGACAAGGATAACCATGATGAAGCCAATAATGGCGACTTCCATGATTTTGGGGAGCATGATGGTGATGATGCAGAACATCCGTTCATGGATGAAGATGTTCTCAATATGAATGATGGTGGAGCTGCCGAGTTTCACAACTACGATGGATTTGAAAACGGCGAATCAAATTGTCAAGAAAGCTTGGAAGATCTCTGCCGCTCACACCTGGATGCTCTTCTCGCTAACATAGCTAAAAGTGAGAAGCAAACAGATCTGGCTGCTCGTGTTTCAACGTGGAAACAGAAAATTGAGCAAAACCTAGAAGAACAAGAGCTACACCCTCCTTTCGACATTCAAGAATATGGAGATAGGATTATTAACAAACTGACTGTTGAAGAGAGCGGAAACGTCGAGACCTTTACTGATCTTATGAAAGACCAAGAAAAGCACGAGGTAGCTCGGGCCTTCTCTGCGCTTCTCCAGTTGGTGAACAATGGAGACGTTGATCTGGAAAAACCTGGGAACTCCACAAACGAACCAATGTGTTATACAGCGGTTAAACCGTTCAGTGTTCGGTTGCTCAAAGTTCATAACAGGAAGAATGAGAAAAGAGGGATACATTTACCCCAAAAACGAGCTAAGTCCCCAATAACCAAAGGCAAATCTCACGAGTCACCACCACCTAAGAAGCGAAACACATGTTCTGTCTCAAGCCAGACTCGGAAAGTCTCGCTAAAGATCTCAAAGATCAACGGTGTTGGTGTAAGATGCACACCAAACAGTAAGAAGAGACGGAAAGGTCGATCTGACGATGTAACTGAGGTAACTGAAGTTGCTTCAATCGAAAAATCTTTGGGGAAATTGTGACTACTCAAATTAGATTGTGTAGTTAGGTATGGGATTTTAATCAGTCAGTTATGAAACTCTGTAACTGTCATTTGTGTAAGTTATAATGAAGGCATTGCCAGAAGAAGTAGCATATGTTGTAATAACAATGAAAAATTCCACTTTAGAGGGTCTTTTAACATATTAGAAAGAGTGCTTGTGGAAATTTTGAATTGTTCATAAAGTGATCTTCTTTATCTTAAGAGAACCGAGAACTTGACAATATTTTGTTCATATGATGTCATTCCACATATTGTTATGTATGTAGCTGCCTTGTTCGATCCATTTCAACTT
CDS Sequence
- >AT3G16730.1
ATGACCAGTCACGGTGGCGGGGAAGTCCGCGGCGAGAGGATTCATACAGTACAGCCGGAGAGGGATTTGGTGGCTAATTGGGAAGTTGATTTGTCGGAGAAGCTAGAAGAGTACCTCCTCAAAATTTGTTCCGGAGAAATCACTGGAAATGAAGAAGATGGGCAAATTCCTGTGAATTTCGCTGAAGCTGCTTTGCTGCTTCAGGGTTCGGTTCAGGTTTACAGCAAGAAAGTTGAGTACTTGTATAATTTAGTTCTACGTACGTTGGAGTTTCTATCGAAGCAAAGAGACCAGGAACAGTCTAAAGGTACATCAAATGAGAATGAGGCAAGCTCCTCACGTCAGGTTGATGAAGAAGAAAATGATCTCTTCTGGAATGTAGATGACATCCCAGTGGACACAAAGAATAGATTGGACAGTTCGGTTGGCGGAGATACTTGTCCAAGTCAATTTGTCAAGCCTCCAGCGAATCTAGTTGTTCTTGAAGGTGACTGTTTGGATACTAGTGGTGACGGAGGAGAATTGGAATCCTATCTGTTGGCAACTACACATCTCTACCGGGATTTTATACTATTAGACCCATGTGATGCTGTAGCGGTGAATGAATTTTTAGGTGATAACTATGGTGGTAAAGGAAGGAACAGTGCCCACAGAGGCAGCTCAGTTCGTAAAAGCTTTCACTCATCTGTTGGACGTTCTGGAGGAAGTGCTCGTAAGTCATCTGTGGGAAAGAATCAGGGCACCAATGTCCACTTGTCCCCAATATGTGGGAATGGTCCCAATGATCAAAATTGTGACCAAGGGTCTCAGCCTCCTGTTTTTGAAGACAATGATCATGGTTTTGACATGGATAATGAATATGGAGGAGCCATGGATTTTAGTGATACAGATGCTGACGAAGATGATCCGTGGAAGCCATTGAATCCCTATGAACCAGGGAAGTTGAAAGTGAAGCCTTTCAAAAAAGTAAAAATTTTAAAAAAGATTGGATGGAGCATTACCAAGGACCATATGACTTCCATGTTCCCTCTCGCTAGACCAAACGGTCCCATCAGTTCAGAGCTTATTGAAATTTGGAAAATGCACGGTTGTGCTAGTAAAGACGAGCAAGCATCACAAGACATCCCTTATTACGAGAAGCTTCGAGAGATGCTTGTGAATGGAGGAAACCAACCTTGTGGTGCTAACGGCAATTACAATGACAATGACAAGGATAACCATGATGAAGCCAATAATGGCGACTTCCATGATTTTGGGGAGCATGATGGTGATGATGCAGAACATCCGTTCATGGATGAAGATGTTCTCAATATGAATGATGGTGGAGCTGCCGAGTTTCACAACTACGATGGATTTGAAAACGGCGAATCAAATTGTCAAGAAAGCTTGGAAGATCTCTGCCGCTCACACCTGGATGCTCTTCTCGCTAACATAGCTAAAAGTGAGAAGCAAACAGATCTGGCTGCTCGTGTTTCAACGTGGAAACAGAAAATTGAGCAAAACCTAGAAGAACAAGAGCTACACCCTCCTTTCGACATTCAAGAATATGGAGATAGGATTATTAACAAACTGACTGTTGAAGAGAGCGGAAACGTCGAGACCTTTACTGATCTTATGAAAGACCAAGAAAAGCACGAGGTAGCTCGGGCCTTCTCTGCGCTTCTCCAGTTGGTGAACAATGGAGACGTTGATCTGGAAAAACCTGGGAACTCCACAAACGAACCAATGTGTTATACAGCGGTTAAACCGTTCAGTGTTCGGTTGCTCAAAGTTCATAACAGGAAGAATGAGAAAAGAGGGATACATTTACCCCAAAAACGAGCTAAGTCCCCAATAACCAAAGGCAAATCTCACGAGTCACCACCACCTAAGAAGCGAAACACATGTTCTGTCTCAAGCCAGACTCGGAAAGTCTCGCTAAAGATCTCAAAGATCAACGGTGTTGGTGTAAGATGCACACCAAACAGTAAGAAGAGACGGAAAGGTCGATCTGACGATGTAACTGAGGTAACTGAAGTTGCTTCAATCGAAAAATCTTTGGGGAAATTGTGA
Protein Sequence
- >AT3G16730.1
MTSHGGGEVRGERIHTVQPERDLVANWEVDLSEKLEEYLLKICSGEITGNEEDGQIPVNFAEAALLLQGSVQVYSKKVEYLYNLVLRTLEFLSKQRDQEQSKGTSNENEASSSRQVDEEENDLFWNVDDIPVDTKNRLDSSVGGDTCPSQFVKPPANLVVLEGDCLDTSGDGGELESYLLATTHLYRDFILLDPCDAVAVNEFLGDNYGGKGRNSAHRGSSVRKSFHSSVGRSGGSARKSSVGKNQGTNVHLSPICGNGPNDQNCDQGSQPPVFEDNDHGFDMDNEYGGAMDFSDTDADEDDPWKPLNPYEPGKLKVKPFKKVKILKKIGWSITKDHMTSMFPLARPNGPISSELIEIWKMHGCASKDEQASQDIPYYEKLREMLVNGGNQPCGANGNYNDNDKDNHDEANNGDFHDFGEHDGDDAEHPFMDEDVLNMNDGGAAEFHNYDGFENGESNCQESLEDLCRSHLDALLANIAKSEKQTDLAARVSTWKQKIEQNLEEQELHPPFDIQEYGDRIINKLTVEESGNVETFTDLMKDQEKHEVARAFSALLQLVNNGDVDLEKPGNSTNEPMCYTAVKPFSVRLLKVHNRKNEKRGIHLPQKRAKSPITKGKSHESPPPKKRNTCSVSSQTRKVSLKISKINGVGVRCTPNSKKRRKGRSDDVTEVTEVASIEKSLGKL