Information report for AT3G16720
Gene Details
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Functional Descriptions
- GO:0061630 — enables — ubiquitin protein ligase activity
- GO:0006952 — acts upstream of or within — defense response
- GO:0005634 — located in — nucleus
Functional Keywords
Literature and News
- Early elicitor induction in members of a novel multigene family coding for highly related RING-H2 proteins in Arabidopsis thaliana. DOI: 10.1023/a:1006267201855 ; PMID: 10480382
- Identification of unstable transcripts in Arabidopsis by cDNA microarray and specific clock-controlled genes. DOI: 10.1073/pnas.152204099 ; PMID: 12167669
- Isolation and gene expression analysis of Arabidopsis thaliana mutants with constitutive expression of ATL2, an early elicitor-response RING-H2 zinc-finger gene. DOI: 10.1534/genetics.104.028043 ; PMID: 15238540
- Genetic interactions of a putative Arabidopsis thaliana ubiquitin-ligase with components of the Saccharomyces cerevisiae ubiquitination machinery. DOI: 10.1007/s00294-006-0093-y ; PMID: 16897085
- Chemical interference of pathogen-associated molecular pattern-triggered immune responses in Arabidopsis reveals a potential role for fatty-acid synthase type II complex-derived lipid signals. DOI: 10.1074/jbc.M608792200 ; PMID: 17166839
- Identification of 118 Arabidopsis transcription factor and 30 ubiquitin-ligase genes responding to chitin, a plant-defense elicitor. DOI: 10.1094/MPMI-20-8-0900 ; PMID: 17722694
- Global analysis of Arabidopsis gene expression uncovers a complex array of changes impacting pathogen response and cell cycle during geminivirus infection. DOI: 10.1104/pp.108.121038 ; PMID: 18650403
- SET DOMAIN GROUP25 encodes a histone methyltransferase and is involved in FLOWERING LOCUS C activation and repression of flowering. DOI: 10.1104/pp.109.143941 ; PMID: 19726574
- Endogenous Arabidopsis messenger RNAs transported to distant tissues. DOI: 10.1038/nplants.2015.25 ; PMID: 27247031
- Repertoire of plant RING E3 ubiquitin ligases revisited: New groups counting gene families and single genes. DOI: 10.1371/journal.pone.0203442 ; PMID: 30169501
- Genetic interactions of a putative Arabidopsis thaliana ubiquitin-ligase with components of the Saccharomyces cerevisiae ubiquitination machinery. DOI: 10.1007/s00294-006-0093-y ; PMID: 16897085
- Identification of 118 Arabidopsis transcription factor and 30 ubiquitin-ligase genes responding to chitin, a plant-defense elicitor. DOI: 10.1094/MPMI-20-8-0900 ; PMID: 17722694
Gene Resources
- UniProt: A0A654FD72
- EMBL: CACRSJ010000106
- AlphaFoldDB: A0A654FD72
- EnsemblPlants: AT3G16720.1
- Gramene: AT3G16720.1
- KEGG: ath:AT3G16720
- Orthologous matrix: MVFFTAD
- ExpressionAtlas: AT3G16720
- InterPro: IPR001841, IPR013083, IPR044600
- PANTHER: PTHR46913, PTHR46913:SF1
- SUPFAM: SSF57850
- PROSITE: PS50089
- Gene3D: 3.30.40.10
- SWISS-MODEL: A0A654FD72
- Conserved Domain Database: cd16461
Homologs
- Arachis hypogaea arahy.Tifrunner.gnm1.ann1.WB8Z1Y, arahy.Tifrunner.gnm1.ann1.466F5F
- Lupinus albus Lalb_Chr17g0345231
- Manihot esculenta MANES_18G002800
- Medicago truncatula Medtr8g073120
- Musa acuminata GSMUA_Achr7P25320_001
- Nicotiana attenuata A4A49_24378
- Oryza sativa NBIP1, EL5, EL5.3, EL5.6, RAE3
- Solanum lycopersicum Solyc04g082690.1
- Solanum tuberosum PGSC0003DMG400009919
- Vitis vinifera VIT_18s0122g00870
Sequences
cDNA Sequence
- >AT3G16720.1
CTCTAAGCATTTTCCCTTTGAAATTTTCAAACTAATTAAATAGTTACCAAAACAAAAAGAAGAAGGGCAGAATAGTCAAAAGAGAAAACTCGCGCGTCAACGTTGGCGTCGTCTTGCCAAACTTTGCCAATAATAATAATTAGACTTCTGCACTTTCTCACGAACCTCTCTGTCTCGTCCATTACTTAAAAACCAAATCTTTCATCATCTTCCTTCACCAGTTGACTCTCTTTCAATCTATCTCTGAATCTCTCACTCTCCTACCCGAAAACCATGAACTCCAACGACCAGGATCCGATTCCGTTCAGACCCGAAGACAACAACTTCTCCGGTTCCAAAACCTACGCCATGAGCGGCAAAATCATGCTAAGTGCAATAGTAATCCTCTTCTTCGTCGTCATTTTAATGGTCTTCCTCCATCTTTACGCTCGTTGGTATCTCCTCCGTGCTCGTAGACGTCATCTCCGTCGTCGTAGCCGTAACCGTCGCGCTACGATGGTTTTCTTCACCGCTGATCCTTCCACCGCCGCAACTTCCGTCGTCGCTTCACGTGGACTTGATCCAAACGTTATTAAATCTCTTCCTGTTTTCACTTTCTCCGACGAGACTCATAAAGATCCGATCGAATGCGCCGTTTGTTTATCGGAATTCGAAGAGAGCGAGACGGGTCGGGTTTTGCCCAATTGTCAACATACTTTTCATGTTGATTGTATTGATATGTGGTTTCATTCTCATTCCACTTGTCCTCTTTGTCGATCTCTCGTTGAGTCTCTCGCCGGGATTGAATCAACGGCGGCGGCGAGGGAGAGGGAAGTTGTGATTGCGGTTGATTCTGATCCGGTTTTGGTAATTGAACCGAGTTCTAGCTCTGGATTGACGGATGAACCACATGGATCTGGATCTTCTCAGATGCTGAGGGAAGATTCCGGGAGAAAACCGGCGGCGATTGAGGTTCCGAGGAGGACTTTTAGCGAGTTTGAAGATGAGTTGACTCGGAGAGACTCGCCGGCGAGTCAGTCGTTTAGGTCTCCGATGAGTCGGATGTTATCTTTCACTCGGATGTTGAGTAGAGATAGAAGAAGCGCTTCGTCTCCTATCGCCGGAGCTCCGCCGCTATCGCCGACGTTAAGCTGCCGGATACAGATGACCGAGTCAGATATCGAACGGGGAGGAGAAGAGAGTAGGTGACTTGTCACGTGTTGGTGTCTGATTGGTTTAATGTTAACCGGGAGTAAAAAAAGGAATTACTACAAGTCAACAGGCTTTTGTCTAGGTGTTGATTTCGGCGCCCAAGGACACGTGGCGTAAACTGAGCTTCCAGGAATCAATATTCACCGTCTATTATGATTAGATAGGTTAGATAGATTTGTGTAACGATGTACAAAGTCATCTACAATATTGAATCTATTTCCATTTATTTTACCATATTCTTTTTTTTTTTATAATTTTCGAAGTTCTACAAACTCTTTTATGTAAAACACAATCCAATGGTCATAATTGTGATAAAGACTTTGCATAATTTTTCCTTTATTTATTACCGATTTAATGTCTTCACTCTTCACTACTTAATTATGA
CDS Sequence
- >AT3G16720.1
ATGAACTCCAACGACCAGGATCCGATTCCGTTCAGACCCGAAGACAACAACTTCTCCGGTTCCAAAACCTACGCCATGAGCGGCAAAATCATGCTAAGTGCAATAGTAATCCTCTTCTTCGTCGTCATTTTAATGGTCTTCCTCCATCTTTACGCTCGTTGGTATCTCCTCCGTGCTCGTAGACGTCATCTCCGTCGTCGTAGCCGTAACCGTCGCGCTACGATGGTTTTCTTCACCGCTGATCCTTCCACCGCCGCAACTTCCGTCGTCGCTTCACGTGGACTTGATCCAAACGTTATTAAATCTCTTCCTGTTTTCACTTTCTCCGACGAGACTCATAAAGATCCGATCGAATGCGCCGTTTGTTTATCGGAATTCGAAGAGAGCGAGACGGGTCGGGTTTTGCCCAATTGTCAACATACTTTTCATGTTGATTGTATTGATATGTGGTTTCATTCTCATTCCACTTGTCCTCTTTGTCGATCTCTCGTTGAGTCTCTCGCCGGGATTGAATCAACGGCGGCGGCGAGGGAGAGGGAAGTTGTGATTGCGGTTGATTCTGATCCGGTTTTGGTAATTGAACCGAGTTCTAGCTCTGGATTGACGGATGAACCACATGGATCTGGATCTTCTCAGATGCTGAGGGAAGATTCCGGGAGAAAACCGGCGGCGATTGAGGTTCCGAGGAGGACTTTTAGCGAGTTTGAAGATGAGTTGACTCGGAGAGACTCGCCGGCGAGTCAGTCGTTTAGGTCTCCGATGAGTCGGATGTTATCTTTCACTCGGATGTTGAGTAGAGATAGAAGAAGCGCTTCGTCTCCTATCGCCGGAGCTCCGCCGCTATCGCCGACGTTAAGCTGCCGGATACAGATGACCGAGTCAGATATCGAACGGGGAGGAGAAGAGAGTAGGTGA
Protein Sequence
- >AT3G16720.1
MNSNDQDPIPFRPEDNNFSGSKTYAMSGKIMLSAIVILFFVVILMVFLHLYARWYLLRARRRHLRRRSRNRRATMVFFTADPSTAATSVVASRGLDPNVIKSLPVFTFSDETHKDPIECAVCLSEFEESETGRVLPNCQHTFHVDCIDMWFHSHSTCPLCRSLVESLAGIESTAAAREREVVIAVDSDPVLVIEPSSSSGLTDEPHGSGSSQMLREDSGRKPAAIEVPRRTFSEFEDELTRRDSPASQSFRSPMSRMLSFTRMLSRDRRSASSPIAGAPPLSPTLSCRIQMTESDIERGGEESR