Gene Details:
- Gene ID: AT3G16710
- Gene Symbol: PPR4
- Gene Name: pentatricopeptide repeat 4
- Description: Pentatricopeptide repeat (PPR) superfamily protein;(source:Araport11)
- TAIR Accession: locus:2089388
- Genome: Araport11_genome_release
- Species: Arabidopsis thaliana
Transcripts:
Gene Ontology:
- GO:0003674 — enables — molecular_function
- GO:0005739 — located in — mitochondrion
- GO:0005575 — is active in — cellular_component
- GO:0008150 — involved in — biological_process
Literature:
- Genome-wide analysis of the RNA-DEPENDENT RNA POLYMERASE6/DICER-LIKE4 pathway in and tasiRNA-directed targeting. DOI: 10.1105/tpc.107.050062 ; PMID: 17400893
- Identification of novel proteins involved in plant cell-wall synthesis based on protein-protein interaction data. DOI: 10.1021/pr100249c ; PMID: 20687615
- MicroRNA400-guided cleavage of Pentatricopeptide repeat protein mRNAs Renders Arabidopsis thaliana more susceptible to pathogenic bacteria and fungi. DOI: 10.1093/pcp/pcu096 ; PMID: 25008976
Sequences:
cDNA Sequence
- >AT3G16710.2
CGAGACTCATGTTCGTATCTCCGTCGCTGTTCTTCCACAAGTATACGAGAGAAGTTAGGTTTTCGTCTTCTTCAAGCTCACCTCCACCATTTCTCTGCTCTTCTTGTTGTATAGAGTTCGAATTGCGCAGTGAAATGACTCAGAAGACATAGATTGTGAATGCGTAGATCCATTGCGACTGGGTTTGCGTCGATAGTGAAGGGATTTCATCTTCATAGTCATAGACATCGTCTACAGATAAGTAACCCTAGAACTGCTGCTTCCTTAAGCCTTTGTGGTTTCTGTTTCTGGATTCGAGCTTTTTCTAGTTACCGAAAGATTTTGAGAAACGGTCTTCACAATCTTCAGTTTAATGATGCTCTTGATTTGTTCACTCGTATGGTTCACTCTCGTCCCCTTCCTTCAATTATCGATTTCACTAGATTATTGAGTGTTATTGCAAAGATGAATAGATATGATGTTGTGATTTCTCTCTTTGAGCAAATGCAAATCCTGGGGATTCCACCTCTTCTTTGTACTTGCAATATCGTTATGCATTGTGTTTGTCTATCTTCTCAGCCTTGTCGTGCTTCGTGCTTTCTTGGGAAGATGATGAAACTTGGTTTTGAGCCTGACTTAGTCACGTTTACTTCTCTGCTTAATGGTTACTGTCATTGGAATAGAATTGAGGATGCTATAGCTCTGTTTGATCAGATTTTGGGAATGGGATTTAAACCTAATGTTGTGACATACACCACATTGATTCGCTGTCTTTGTAAAAACCGACATTTGAATCACGCGGTGGAGCTTTTTAACCAGATGGGGACTAATGGGAGTAGACCGAATGTTGTTACCTACAACGCTCTTGTTACCGGTCTTTGCGAGATTGGTAGATGGGGTGATGCTGCTTGGCTTCTGAGGGATATGATGAAGAGGAGAATTGAACCTAATGTAATCACTTTCACTGCGTTGATCGATGCGTTTGTGAAAGTGGGGAAGCTTATGGAGGCTAAAGAACTGTACAATGTGATGATCCAAATGTCTGTGTATCCTGATGTTTTCACTTACGGTTCACTGATCAATGGGCTTTGCATGTATGGTCTCTTAGATGAGGCTAGGCAAATGTTTTATTTGATGGAAAGGAATGGTTGCTACCCGAATGAAGTGATTTATACTACTCTCATACATGGATTTTGCAAGTCTAAAAGGGTAGAGGACGGGATGAAAATCTTCTATGAGATGTCGCAGAAAGGAGTAGTTGCAAACACAATCACTTACACCGTTCTTATCCAGGGTTATTGTCTAGTGGGCAGACCTGATGTTGCCCAAGAAGTTTTCAATCAGATGAGTTCTCGTCGTGCGCCTCCAGATATTAGGACATACAACGTTTTGTTAGATGGTCTTTGTTGTAATGGGAAAGTAGAGAAGGCATTGATGATATTCGAATACATGCGGAAGAGAGAGATGGATATTAATATTGTTACATATACCATCATTATTCAAGGGATGTGCAAGCTTGGCGAGGCTTAATTCATGAAGCTGATTCGCTGTTTAAGAAAATGAAAGAAGATGGGTTCTTACCAAATGAAAGTGTGTACAAGTAG - >AT3G16710.1
CGAGACTCATGTTCGTATCTCCGTCGCTGTTCTTCCACAAGTATACGAGAGAAGTTAGGTTTTCGTCTTCTTCAAGCTCACCTCCACCATTTCTCTGCTCTTCTTGTTGTATAGAGTTCGAATTGCGCAGTGAAATGACTCAGAAGACATAGATTGTGAATGCGTAGATCCATTGCGACTGGGTTTGCGTCGATAGTGAAGGGATTTCATCTTCATAGTCATAGACATCGTCTACAGATAAGTAACCCTAGAACTGCTGCTTCCTTAAGCCTTTGTGGTTTCTGTTTCTGGATTCGAGCTTTTTCTAGTTACCGAAAGATTTTGAGAAACGGTCTTCACAATCTTCAGTTTAATGATGCTCTTGATTTGTTCACTCGTATGGTTCACTCTCGTCCCCTTCCTTCAATTATCGATTTCACTAGATTATTGAGTGTTATTGCAAAGATGAATAGATATGATGTTGTGATTTCTCTCTTTGAGCAAATGCAAATCCTGGGGATTCCACCTCTTCTTTGTACTTGCAATATCGTTATGCATTGTGTTTGTCTATCTTCTCAGCCTTGTCGTGCTTCGTGCTTTCTTGGGAAGATGATGAAACTTGGTTTTGAGCCTGACTTAGTCACGTTTACTTCTCTGCTTAATGGTTACTGTCATTGGAATAGAATTGAGGATGCTATAGCTCTGTTTGATCAGATTTTGGGAATGGGATTTAAACCTAATGTTGTGACATACACCACATTGATTCGCTGTCTTTGTAAAAACCGACATTTGAATCACGCGGTGGAGCTTTTTAACCAGATGGGGACTAATGGGAGTAGACCGAATGTTGTTACCTACAACGCTCTTGTTACCGGTCTTTGCGAGATTGGTAGATGGGGTGATGCTGCTTGGCTTCTGAGGGATATGATGAAGAGGAGAATTGAACCTAATGTAATCACTTTCACTGCGTTGATCGATGCGTTTGTGAAAGTGGGGAAGCTTATGGAGGCTAAAGAACTGTACAATGTGATGATCCAAATGTCTGTGTATCCTGATGTTTTCACTTACGGTTCACTGATCAATGGGCTTTGCATGTATGGTCTCTTAGATGAGGCTAGGCAAATGTTTTATTTGATGGAAAGGAATGGTTGCTACCCGAATGAAGTGATTTATACTACTCTCATACATGGATTTTGCAAGTCTAAAAGGGTAGAGGACGGGATGAAAATCTTCTATGAGATGTCGCAGAAAGGAGTAGTTGCAAACACAATCACTTACACCGTTCTTATCCAGGGTTATTGTCTAGTGGGCAGACCTGATGTTGCCCAAGAAGTTTTCAATCAGATGAGTTCTCGTCGTGCGCCTCCAGATATTAGGACATACAACGTTTTGTTAGATGGTCTTTGTTGTAATGGGAAAGTAGAGAAGGCATTGATGATATTCGAATACATGCGGAAGAGAGAGATGGATATTAATATTGTTACATATACCATCATTATTCAAGGGATGTGCAAGCTTGGCGAGGCTTAATTCATGAAGCTGATTCGCTGTTTAAGAAAATGAAAGAAGATGGGTTCTTACCAAATGAAAGTGTGTACAAGTAG
CDS Sequence
- >AT3G16710.2
ATGCGTAGATCCATTGCGACTGGGTTTGCGTCGATAGTGAAGGGATTTCATCTTCATAGTCATAGACATCGTCTACAGATAAGTAACCCTAGAACTGCTGCTTCCTTAAGCCTTTGTGGTTTCTGTTTCTGGATTCGAGCTTTTTCTAGTTACCGAAAGATTTTGAGAAACGGTCTTCACAATCTTCAGTTTAATGATGCTCTTGATTTGTTCACTCGTATGGTTCACTCTCGTCCCCTTCCTTCAATTATCGATTTCACTAGATTATTGAGTGTTATTGCAAAGATGAATAGATATGATGTTGTGATTTCTCTCTTTGAGCAAATGCAAATCCTGGGGATTCCACCTCTTCTTTGTACTTGCAATATCGTTATGCATTGTGTTTGTCTATCTTCTCAGCCTTGTCGTGCTTCGTGCTTTCTTGGGAAGATGATGAAACTTGGTTTTGAGCCTGACTTAGTCACGTTTACTTCTCTGCTTAATGGTTACTGTCATTGGAATAGAATTGAGGATGCTATAGCTCTGTTTGATCAGATTTTGGGAATGGGATTTAAACCTAATGTTGTGACATACACCACATTGATTCGCTGTCTTTGTAAAAACCGACATTTGAATCACGCGGTGGAGCTTTTTAACCAGATGGGGACTAATGGGAGTAGACCGAATGTTGTTACCTACAACGCTCTTGTTACCGGTCTTTGCGAGATTGGTAGATGGGGTGATGCTGCTTGGCTTCTGAGGGATATGATGAAGAGGAGAATTGAACCTAATGTAATCACTTTCACTGCGTTGATCGATGCGTTTGTGAAAGTGGGGAAGCTTATGGAGGCTAAAGAACTGTACAATGTGATGATCCAAATGTCTGTGTATCCTGATGTTTTCACTTACGGTTCACTGATCAATGGGCTTTGCATGTATGGTCTCTTAGATGAGGCTAGGCAAATGTTTTATTTGATGGAAAGGAATGGTTGCTACCCGAATGAAGTGATTTATACTACTCTCATACATGGATTTTGCAAGTCTAAAAGGGTAGAGGACGGGATGAAAATCTTCTATGAGATGTCGCAGAAAGGAGTAGTTGCAAACACAATCACTTACACCGTTCTTATCCAGGGTTATTGTCTAGTGGGCAGACCTGATGTTGCCCAAGAAGTTTTCAATCAGATGAGTTCTCGTCGTGCGCCTCCAGATATTAGGACATACAACGTTTTGTTAGATGGTCTTTGTTGTAATGGGAAAGTAGAGAAGGCATTGATGATATTCGAATACATGCGGAAGAGAGAGATGGATATTAATATTGTTACATATACCATCATTATTCAAGGGATGTGCAAGCTTGGCGAGGCTTAA - >AT3G16710.1
ATGCGTAGATCCATTGCGACTGGGTTTGCGTCGATAGTGAAGGGATTTCATCTTCATAGTCATAGACATCGTCTACAGATAAGTAACCCTAGAACTGCTGCTTCCTTAAGCCTTTGTGGTTTCTGTTTCTGGATTCGAGCTTTTTCTAGTTACCGAAAGATTTTGAGAAACGGTCTTCACAATCTTCAGTTTAATGATGCTCTTGATTTGTTCACTCGTATGGTTCACTCTCGTCCCCTTCCTTCAATTATCGATTTCACTAGATTATTGAGTGTTATTGCAAAGATGAATAGATATGATGTTGTGATTTCTCTCTTTGAGCAAATGCAAATCCTGGGGATTCCACCTCTTCTTTGTACTTGCAATATCGTTATGCATTGTGTTTGTCTATCTTCTCAGCCTTGTCGTGCTTCGTGCTTTCTTGGGAAGATGATGAAACTTGGTTTTGAGCCTGACTTAGTCACGTTTACTTCTCTGCTTAATGGTTACTGTCATTGGAATAGAATTGAGGATGCTATAGCTCTGTTTGATCAGATTTTGGGAATGGGATTTAAACCTAATGTTGTGACATACACCACATTGATTCGCTGTCTTTGTAAAAACCGACATTTGAATCACGCGGTGGAGCTTTTTAACCAGATGGGGACTAATGGGAGTAGACCGAATGTTGTTACCTACAACGCTCTTGTTACCGGTCTTTGCGAGATTGGTAGATGGGGTGATGCTGCTTGGCTTCTGAGGGATATGATGAAGAGGAGAATTGAACCTAATGTAATCACTTTCACTGCGTTGATCGATGCGTTTGTGAAAGTGGGGAAGCTTATGGAGGCTAAAGAACTGTACAATGTGATGATCCAAATGTCTGTGTATCCTGATGTTTTCACTTACGGTTCACTGATCAATGGGCTTTGCATGTATGGTCTCTTAGATGAGGCTAGGCAAATGTTTTATTTGATGGAAAGGAATGGTTGCTACCCGAATGAAGTGATTTATACTACTCTCATACATGGATTTTGCAAGTCTAAAAGGGTAGAGGACGGGATGAAAATCTTCTATGAGATGTCGCAGAAAGGAGTAGTTGCAAACACAATCACTTACACCGTTCTTATCCAGGGTTATTGTCTAGTGGGCAGACCTGATGTTGCCCAAGAAGTTTTCAATCAGATGAGTTCTCGTCGTGCGCCTCCAGATATTAGGACATACAACGTTTTGTTAGATGGTCTTTGTTGTAATGGGAAAGTAGAGAAGGCATTGATGATATTCGAATACATGCGGAAGAGAGAGATGGATATTAATATTGTTACATATACCATCATTATTCAAGGGATGTGCAAGCTTGGCGAGGCTTAA
Protein Sequence
- >AT3G16710.2
MRRSIATGFASIVKGFHLHSHRHRLQISNPRTAASLSLCGFCFWIRAFSSYRKILRNGLHNLQFNDALDLFTRMVHSRPLPSIIDFTRLLSVIAKMNRYDVVISLFEQMQILGIPPLLCTCNIVMHCVCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGMGFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKREMDINIVTYTIIIQGMCKLGEA - >AT3G16710.1
MRRSIATGFASIVKGFHLHSHRHRLQISNPRTAASLSLCGFCFWIRAFSSYRKILRNGLHNLQFNDALDLFTRMVHSRPLPSIIDFTRLLSVIAKMNRYDVVISLFEQMQILGIPPLLCTCNIVMHCVCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGMGFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKREMDINIVTYTIIIQGMCKLGEA