Information report for AT3G16550
Gene Details
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Functional Descriptions
- GO:0004252 — enables — serine-type endopeptidase activity
- GO:0006508 — acts upstream of or within — proteolysis
- GO:0005634 — located in — nucleus
Functional Keywords
Literature and News
- Chloroplast and mitochondrial proteases in Arabidopsis. A proposed nomenclature. DOI: 10.1104/pp.125.4.1912 ; PMID: 11299370
- The gene complement for proteolysis in the cyanobacterium Synechocystis sp. PCC 6803 and Arabidopsis thaliana chloroplasts. DOI: 10.1007/s00294-002-0309-8 ; PMID: 12185496
- Cross genome comparisons of serine proteases in Arabidopsis and rice. DOI: 10.1186/1471-2164-7-200 ; PMID: 16895613
- Protease gene families in Populus and Arabidopsis. DOI: 10.1186/1471-2229-6-30 ; PMID: 17181860
- Deg proteases and their role in protein quality control and processing in different subcellular compartments of the plant cell. DOI: 10.1111/j.1399-3054.2011.01533.x ; PMID: 22008015
- The family of Deg/HtrA proteases in plants. DOI: 10.1186/1471-2229-12-52 ; PMID: 22520048
Gene Resources
- UniProt: A0A654FD52
- EMBL: CACRSJ010000106
- AlphaFoldDB: A0A654FD52
- EnsemblPlants: AT3G16550.1
- Gramene: AT3G16550.1
- KEGG: ath:AT3G16550
- Orthologous matrix: THTERCY
- ExpressionAtlas: AT3G16550
- InterPro: IPR001478, IPR001940, IPR009003
- PANTHER: PTHR45980, PTHR45980:SF7
- SUPFAM: SSF50156, SSF50494
- Gene3D: 2.30.42.10, 2.40.10.10, 3.20.190.20
- SWISS-MODEL: A0A654FD52
Homologs
- Oryza sativa TCM5
Sequences
cDNA Sequence
- >AT3G16550.1
ATGCTTTTCCGGTCGTGTGTTGGTATGGTGTCCCGGTACTCGAGAGCTCTACTCCCGACGATAACAATCTCTAGCCGGATCGCTACTATTGTTCTTCCGTTTGCATTAACTCGCGGAAGAAAGATCCATACCATGTCGAAGGATGAGGAATGGTGGAAGAAAATAAGAAAAAGTCCTCCCGTTGATGAATTGATGTTGGAGTCGGTGGTAGAGGTCTTCACTGACTCTACCAAGTATAGCAAAGTCAAACCTTGGCAGACTCTTAACCAAGAATCATATGGGGGCTCTGGATTTGCAATCGCGGGAAAGAAAATTCTTACGAACGCTCATGTGGTGGAGGGGATGAATGATCACATATTCGTGCACGTCAAAAGACATGGCTCTCAAGTCAAATACAAAGCAAAAGTTCAAAAGATTGCACATGAGTGTGATTTGGCCATCTTGGAGATCGATAGCGACGAGTTTTGGAAGGGTATGAATCCCTTGGAGTTCGGAGACATACCGCCTCTCAATGAAATTGTATATGTTGTTGGTTATCCAAAAGCTGGTGAAACAATATGCGTTACAAAAGGTGTTGTAACTGGAGTTAAAACTGGAAATTACCTTCGAAGTTCCACTAAACTACTGACAATACATATTGACGCAACTACCTACGGTGGAAATAGTGGTGGCCCGGTTATTACAGGAGACAAAGTCCTTGGTGTACTATTTCAAATTCTTGGAGATAAGAAAAGTACAGGTGTTGTAATCCCAACCCCAATAATTAGACATTTCATAACTGGTGCAGAAGAAAGCTCCCACAACGCTGTTTTTGGCTCACTAGTTTTATCATGTCAGTCAATGAAAAATGCTCAAATTCGTAATCATTTTAAGATGAGCCCTGAAACGACAGGAATTCTTATAAACAAAATAAACTCATCGTCGGGGGCTCACAAAATTCTGAGAAAAGATGACATCATTCTCGCAATTGATGGTGTTCCAGTCCTTTCCGAAATGAGACGAATAAGTTTCAATCATTTTATTTCTATGAAGAAACCAGATGAAAATATCTTAGTAAAGGTTCTAAGGAAGGGGAAAGAGCATGAGTACAATATCAGTTTAAAGCCGGTGAAACCACACATTCAAGTGCAACAATATTATAACCTTCCAAGTTATTACATATTCGGTGGTTTTGTTTTTGTGCCTCTCACTAAATCGTACATTGATGATAAGTACTACAAAATTACCGATGAACAACATGTCATAATCTCTCAGGTAATGCCAGATGACATTAACAAAGGATACAGTAATTTCAAAGATTTACAGGTGGAAAAAGTAAACGGAGTGAAAGTAAAGAATTTGAAACACTTACGTGAACTAATAGAGGGATGTTTTAGCAAAGATCTGAGGCTGGACTTGGAGAATGACAAAGTGATGGTACTCAACTATGAATCTGCTAAAAAGGCAACATTTGAGATCTTGGAACGTCACAATATAAAATCGGCTTGGGCCAGCGAGTAG
CDS Sequence
- >AT3G16550.1
ATGCTTTTCCGGTCGTGTGTTGGTATGGTGTCCCGGTACTCGAGAGCTCTACTCCCGACGATAACAATCTCTAGCCGGATCGCTACTATTGTTCTTCCGTTTGCATTAACTCGCGGAAGAAAGATCCATACCATGTCGAAGGATGAGGAATGGTGGAAGAAAATAAGAAAAAGTCCTCCCGTTGATGAATTGATGTTGGAGTCGGTGGTAGAGGTCTTCACTGACTCTACCAAGTATAGCAAAGTCAAACCTTGGCAGACTCTTAACCAAGAATCATATGGGGGCTCTGGATTTGCAATCGCGGGAAAGAAAATTCTTACGAACGCTCATGTGGTGGAGGGGATGAATGATCACATATTCGTGCACGTCAAAAGACATGGCTCTCAAGTCAAATACAAAGCAAAAGTTCAAAAGATTGCACATGAGTGTGATTTGGCCATCTTGGAGATCGATAGCGACGAGTTTTGGAAGGGTATGAATCCCTTGGAGTTCGGAGACATACCGCCTCTCAATGAAATTGTATATGTTGTTGGTTATCCAAAAGCTGGTGAAACAATATGCGTTACAAAAGGTGTTGTAACTGGAGTTAAAACTGGAAATTACCTTCGAAGTTCCACTAAACTACTGACAATACATATTGACGCAACTACCTACGGTGGAAATAGTGGTGGCCCGGTTATTACAGGAGACAAAGTCCTTGGTGTACTATTTCAAATTCTTGGAGATAAGAAAAGTACAGGTGTTGTAATCCCAACCCCAATAATTAGACATTTCATAACTGGTGCAGAAGAAAGCTCCCACAACGCTGTTTTTGGCTCACTAGTTTTATCATGTCAGTCAATGAAAAATGCTCAAATTCGTAATCATTTTAAGATGAGCCCTGAAACGACAGGAATTCTTATAAACAAAATAAACTCATCGTCGGGGGCTCACAAAATTCTGAGAAAAGATGACATCATTCTCGCAATTGATGGTGTTCCAGTCCTTTCCGAAATGAGACGAATAAGTTTCAATCATTTTATTTCTATGAAGAAACCAGATGAAAATATCTTAGTAAAGGTTCTAAGGAAGGGGAAAGAGCATGAGTACAATATCAGTTTAAAGCCGGTGAAACCACACATTCAAGTGCAACAATATTATAACCTTCCAAGTTATTACATATTCGGTGGTTTTGTTTTTGTGCCTCTCACTAAATCGTACATTGATGATAAGTACTACAAAATTACCGATGAACAACATGTCATAATCTCTCAGGTAATGCCAGATGACATTAACAAAGGATACAGTAATTTCAAAGATTTACAGGTGGAAAAAGTAAACGGAGTGAAAGTAAAGAATTTGAAACACTTACGTGAACTAATAGAGGGATGTTTTAGCAAAGATCTGAGGCTGGACTTGGAGAATGACAAAGTGATGGTACTCAACTATGAATCTGCTAAAAAGGCAACATTTGAGATCTTGGAACGTCACAATATAAAATCGGCTTGGGCCAGCGAGTAG
Protein Sequence
- >AT3G16550.1
MLFRSCVGMVSRYSRALLPTITISSRIATIVLPFALTRGRKIHTMSKDEEWWKKIRKSPPVDELMLESVVEVFTDSTKYSKVKPWQTLNQESYGGSGFAIAGKKILTNAHVVEGMNDHIFVHVKRHGSQVKYKAKVQKIAHECDLAILEIDSDEFWKGMNPLEFGDIPPLNEIVYVVGYPKAGETICVTKGVVTGVKTGNYLRSSTKLLTIHIDATTYGGNSGGPVITGDKVLGVLFQILGDKKSTGVVIPTPIIRHFITGAEESSHNAVFGSLVLSCQSMKNAQIRNHFKMSPETTGILINKINSSSGAHKILRKDDIILAIDGVPVLSEMRRISFNHFISMKKPDENILVKVLRKGKEHEYNISLKPVKPHIQVQQYYNLPSYYIFGGFVFVPLTKSYIDDKYYKITDEQHVIISQVMPDDINKGYSNFKDLQVEKVNGVKVKNLKHLRELIEGCFSKDLRLDLENDKVMVLNYESAKKATFEILERHNIKSAWASE