Information report for AT3G16500
Gene Details
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Functional Descriptions
- GO:0005515 — enables — protein binding
- GO:0006355 — involved in — regulation of DNA-templated transcription
- GO:0009733 — acts upstream of or within — response to auxin
- GO:0005634 — located in — nucleus
- GO:0003700 — enables — DNA-binding transcription factor activity
- GO:0042802 — enables — identical protein binding
Functional Keywords
Literature and News
- Arabidopsis transcription factors: genome-wide comparative analysis among eukaryotes. DOI: 10.1126/science.290.5499.2105 ; PMID: 11118137
- Genetics of Aux/IAA and ARF action in plant growth and development. DOI: NA ; PMID: 12036262
- Interaction of the tobacco mosaic virus replicase protein with the Aux/IAA protein PAP1/IAA26 is associated with disease development. DOI: 10.1128/JVI.79.4.2549-2558.2005 ; PMID: 15681455
- The Arabidopsis Aux/IAA protein family has diversified in degradation and auxin responsiveness. DOI: 10.1105/tpc.105.039172 ; PMID: 16489122
- The Tobacco mosaic virus replicase protein disrupts the localization and function of interacting Aux/IAA proteins. DOI: 10.1094/MPMI-19-0864 ; PMID: 16903352
- Molecular mechanism for jasmonate-induction of anthocyanin accumulation in Arabidopsis. DOI: 10.1093/jxb/erp223 ; PMID: 19596700
- Phytochrome-interacting factors PIF4 and PIF5 negatively regulate anthocyanin biosynthesis under red light in Arabidopsis seedlings. DOI: 10.1016/j.plantsci.2015.06.001 ; PMID: 26259175
- The Arabidopsis Transcription Factor MYB112 Promotes Anthocyanin Formation during Salinity and under High Light Stress. DOI: 10.1104/pp.15.00605 ; PMID: 26378103
- SUMO E3 Ligase SIZ1 stabilizes MYB75 to regulate anthocyanin accumulation under high light conditions in Arabidopsis. DOI: 10.1016/j.plantsci.2019.110355 ; PMID: 32005403
- PHYTOCHROME-INTERACTING FACTOR 4 (PIF4) negatively regulates anthocyanin accumulation by inhibiting PAP1 transcription in Arabidopsis seedlings. DOI: 10.1016/j.plantsci.2020.110788 ; PMID: 33487363
- Arabidopsis transcription factors: genome-wide comparative analysis among eukaryotes. DOI: 10.1126/science.290.5499.2105 ; PMID: 11118137
- Expression pattern shifts following duplication indicative of subfunctionalization and neofunctionalization in regulatory genes of Arabidopsis. DOI: 10.1093/molbev/msj051 ; PMID: 16280546
Gene Resources
- UniProt: A0A1I9LMH6
- EMBL: CP002686
- AlphaFoldDB: A0A1I9LMH6
- EnsemblPlants: AT3G16500.2
- Gramene: AT3G16500.2
- Orthologous matrix: AENGWIM
- ExpressionAtlas: AT3G16500
- InterPro: IPR003311, IPR033389, IPR053793
- PANTHER: PTHR31734, PTHR31734:SF2
- SUPFAM: SSF54277
- PROSITE: PS51745
- Gene3D: 3.10.20.90
- OrthoDB: A0A1I9LMH6
- SWISS-MODEL: A0A1I9LMH6
Homologs
- Actinidia chinensis CEY00_Acc04212, CEY00_Acc22763
- Citrullus lanatus Cla97C05G085700
- Cucumis melo MELO3C006476
- Gossypium hirsutum Gohir.D11G132700, Gohir.A07G209000
- Manihot esculenta MANES_15G036200
- Medicago truncatula Medtr1g070520
- Nicotiana attenuata A4A49_02602
- Oryza sativa OsIAA18, IAA6;OsIAA6, OsIAA2, OsIAA10, OsIAA25
- Populus trichocarpa POPTR_008G161200v3
- Rosa chinensis RchiOBHm_Chr4g0389621, RchiOBHm_Chr6g0289571
- Sesamum indicum SIN_1002570
- Triticum aestivum TaIAA17-3A
Sequences
cDNA Sequence
- >AT3G16500.2
TTCTCTTCTCGTCCCTTTCAGAATCTTTAGAGAGAGAGAACAACAAATTGAGAAAGAAAAAAAGGTAAGGCTGTGTGAGAGAGAACCCACCAAAGCGTGCACGAGAGAGAGAAAAAAAAAGCTTTGATTTTGTATAAAATCCCACCACTGCTCTCTTACCATACCTTCATTACACATCTCTCTTTCTCTCTCTCGCTCTCAGTTTTGTGGGATTGTTTCTTTAAAAGGGGTTCTTAGGGTTTAGTGAAGCTATAGATTTCAATTTCATACATAGTTAACGTATAGAAGGAATCTTGGGTTGATCAATGGAAGGTTGTCCAAGAAACAGAGAAATCGGTCCAAAACTTCTTGATTTGATTCCACAAGGAAGGAAATGGTACCAAGAAGACAAGAACAACACAGATCAGGAGAAGAAACTTGAGCTAAGGCTTGGACCACCCGGTGGTGATGAAGAAGATCATTCAGCAATCAAGAAGAAGAACACAGAGATAAGAAACATCAAGAAGGAAACAGAAGACAAATCTTTCCACTGTTTTAATGGCAATCACTTCTCTCCTTCCAACAAAACCACTTCTGTTCCTCACATCTCACAGAAAAGAACTGCTCCTGGTCCAGTGGTGGGTTGGCCTCCGGTTCGTTCGTTCAGAAAGAATCTAGCGAGCACAAGCTCTTCAAAGCTAGGTAACGAATCCTCTCATGGAGGTCAAATCAACAAGAGTGATGATGGTGAAAAACAAGTTGAAACCAAGAAGGAAGGAATGTTTGTCAAGATCAACATGGATGGTGTTCCTATTGGTCGTAAAGTTGATCTCAATGCTTACAACAGCTACGAACAGCTCTCTTTTGTCGTTGACAAACTCTTCAGAGGTCTACTCGCAGCTCAAAGAGATATCTCTGATGGTCAAGGAGAAGAGAAACCTATCATTGGATTATTAGATGGGAAAGGAGAATTTACTTTAACCTATGAAGACAATGAAGGGGACAAGATGCTTGTTGGGGATGTTCCATGGCAAATGTTTGTTTCATCTGTGAAGAGACTGCGTGTGATTAAAAGCTCTGAGATTTCATCTGCCTTGACATGTAAGCTTCTGTTCTTATATGTTTAGATGATTTATTAGAGCTATATGATTAAAAGGGTTCCTCTGTATATTTGCAG - >AT3G16500.1
TTCTCTTCTCGTCCCTTTCAGAATCTTTAGAGAGAGAGAACAACAAATTGAGAAAGAAAAAAAGGTAAGGCTGTGTGAGAGAGAACCCACCAAAGCGTGCACGAGAGAGAGAAAAAAAAAGCTTTGATTTTGTATAAAATCCCACCACTGCTCTCTTACCATACCTTCATTACACATCTCTCTTTCTCTCTCTCGCTCTCAGTTTTGTGGGATTGTTTCTTTAAAAGGGGTTCTTAGGGTTTAGTGAAGCTATAGATTTCAATTTCATACATAGTTAACGTATAGAAGGAATCTTGGGTTGATCAATGGAAGGTTGTCCAAGAAACAGAGAAATCGGTCCAAAACTTCTTGATTTGATTCCACAAGGAAGGAAATGGTACCAAGAAGACAAGAACAACACAGATCAGGAGAAGAAACTTGAGCTAAGGCTTGGACCACCCGGTGGTGATGAAGAAGATCATTCAGCAATCAAGAAGAAGAACACAGAGATAAGAAACATCAAGAAGGAAACAGAAGACAAATCTTTCCACTGTTTTAATGGCAATCACTTCTCTCCTTCCAACAAAACCACTTCTGTTCCTCACATCTCACAGAAAAGAACTGCTCCTGGTCCAGTGGTGGGTTGGCCTCCGGTTCGTTCGTTCAGAAAGAATCTAGCGAGCACAAGCTCTTCAAAGCTAGGTAACGAATCCTCTCATGGAGGTCAAATCAACAAGAGTGATGATGGTGAAAAACAAGTTGAAACCAAGAAGGAAGGAATGTTTGTCAAGATCAACATGGATGGTGTTCCTATTGGTCGTAAAGTTGATCTCAATGCTTACAACAGCTACGAACAGCTCTCTTTTGTCGTTGACAAACTCTTCAGAGGTCTACTCGCAGCTCAAAGAGATATCTCTGATGGTCAAGGAGAAGAGAAACCTATCATTGGATTATTAGATGGGAAAGGAGAATTTACTTTAACCTATGAAGACAATGAAGGGGACAAGATGCTTGTTGGGGATGTTCCATGGCAAATGTTTGTTTCATCTGTGAAGAGACTGCGTGTGATTAAAAGCTCTGAGATTTCATCTGCCTTGACATGTAAGCTTCTGTTCTTATATGTTTAGATGATTTATTAGAGCTATATGATTAAAAGGGTTCCTCTGTATATTTGCAG
CDS Sequence
- >AT3G16500.2
ATGGAAGGTTGTCCAAGAAACAGAGAAATCGGTCCAAAACTTCTTGATTTGATTCCACAAGGAAGGAAATGGTACCAAGAAGACAAGAACAACACAGATCAGGAGAAGAAACTTGAGCTAAGGCTTGGACCACCCGGTGGTGATGAAGAAGATCATTCAGCAATCAAGAAGAAGAACACAGAGATAAGAAACATCAAGAAGGAAACAGAAGACAAATCTTTCCACTGTTTTAATGGCAATCACTTCTCTCCTTCCAACAAAACCACTTCTGTTCCTCACATCTCACAGAAAAGAACTGCTCCTGGTCCAGTGGTGGGTTGGCCTCCGGTTCGTTCGTTCAGAAAGAATCTAGCGAGCACAAGCTCTTCAAAGCTAGGTAACGAATCCTCTCATGGAGGTCAAATCAACAAGAGTGATGATGGTGAAAAACAAGTTGAAACCAAGAAGGAAGGAATGTTTGTCAAGATCAACATGGATGGTGTTCCTATTGGTCGTAAAGTTGATCTCAATGCTTACAACAGCTACGAACAGCTCTCTTTTGTCGTTGACAAACTCTTCAGAGGTCTACTCGCAGCTCAAAGAGATATCTCTGATGGTCAAGGAGAAGAGAAACCTATCATTGGATTATTAGATGGGAAAGGAGAATTTACTTTAACCTATGAAGACAATGAAGGGGACAAGATGCTTGTTGGGGATGTTCCATGGCAAATGTTTGTTTCATCTGTGAAGAGACTGCGTGTGATTAAAAGCTCTGAGATTTCATCTGCCTTGACATGTAAGCTTCTGTTCTTATATGTTTAG - >AT3G16500.1
ATGGAAGGTTGTCCAAGAAACAGAGAAATCGGTCCAAAACTTCTTGATTTGATTCCACAAGGAAGGAAATGGTACCAAGAAGACAAGAACAACACAGATCAGGAGAAGAAACTTGAGCTAAGGCTTGGACCACCCGGTGGTGATGAAGAAGATCATTCAGCAATCAAGAAGAAGAACACAGAGATAAGAAACATCAAGAAGGAAACAGAAGACAAATCTTTCCACTGTTTTAATGGCAATCACTTCTCTCCTTCCAACAAAACCACTTCTGTTCCTCACATCTCACAGAAAAGAACTGCTCCTGGTCCAGTGGTGGGTTGGCCTCCGGTTCGTTCGTTCAGAAAGAATCTAGCGAGCACAAGCTCTTCAAAGCTAGGTAACGAATCCTCTCATGGAGGTCAAATCAACAAGAGTGATGATGGTGAAAAACAAGTTGAAACCAAGAAGGAAGGAATGTTTGTCAAGATCAACATGGATGGTGTTCCTATTGGTCGTAAAGTTGATCTCAATGCTTACAACAGCTACGAACAGCTCTCTTTTGTCGTTGACAAACTCTTCAGAGGTCTACTCGCAGCTCAAAGAGATATCTCTGATGGTCAAGGAGAAGAGAAACCTATCATTGGATTATTAGATGGGAAAGGAGAATTTACTTTAACCTATGAAGACAATGAAGGGGACAAGATGCTTGTTGGGGATGTTCCATGGCAAATGTTTGTTTCATCTGTGAAGAGACTGCGTGTGATTAAAAGCTCTGAGATTTCATCTGCCTTGACATGTAAGCTTCTGTTCTTATATGTTTAG
Protein Sequence
- >AT3G16500.2
MEGCPRNREIGPKLLDLIPQGRKWYQEDKNNTDQEKKLELRLGPPGGDEEDHSAIKKKNTEIRNIKKETEDKSFHCFNGNHFSPSNKTTSVPHISQKRTAPGPVVGWPPVRSFRKNLASTSSSKLGNESSHGGQINKSDDGEKQVETKKEGMFVKINMDGVPIGRKVDLNAYNSYEQLSFVVDKLFRGLLAAQRDISDGQGEEKPIIGLLDGKGEFTLTYEDNEGDKMLVGDVPWQMFVSSVKRLRVIKSSEISSALTCKLLFLYV - >AT3G16500.1
MEGCPRNREIGPKLLDLIPQGRKWYQEDKNNTDQEKKLELRLGPPGGDEEDHSAIKKKNTEIRNIKKETEDKSFHCFNGNHFSPSNKTTSVPHISQKRTAPGPVVGWPPVRSFRKNLASTSSSKLGNESSHGGQINKSDDGEKQVETKKEGMFVKINMDGVPIGRKVDLNAYNSYEQLSFVVDKLFRGLLAAQRDISDGQGEEKPIIGLLDGKGEFTLTYEDNEGDKMLVGDVPWQMFVSSVKRLRVIKSSEISSALTCKLLFLYV