Information report for AT3G16480
Gene Details
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Functional Descriptions
- GO:0034654 — acts upstream of or within — nucleobase-containing compound biosynthetic process
- GO:0005739 — located in — mitochondrion
- GO:0005750 — part of — mitochondrial respiratory chain complex III
- GO:0006508 — involved in — proteolysis
- GO:0046872 — enables — metal ion binding
- GO:0005759 — located in — mitochondrial matrix
- GO:0005741 — located in — mitochondrial outer membrane
- GO:0000325 — located in — plant-type vacuole
- GO:0048316 — acts upstream of or within — seed development
- GO:0000910 — acts upstream of or within — cytokinesis
- GO:0005743 — located in — mitochondrial inner membrane
- GO:1901566 — acts upstream of or within — organonitrogen compound biosynthetic process
- GO:0009507 — located in — chloroplast
- GO:0005829 — located in — cytosol
- GO:0005758 — located in — mitochondrial intermembrane space
- GO:0004222 — enables — metalloendopeptidase activity
- GO:0016070 — acts upstream of or within — RNA metabolic process
- GO:0005739 — is active in — mitochondrion
- GO:0044281 — acts upstream of or within — small molecule metabolic process
Functional Keywords
Literature and News
- The gene complement for proteolysis in the cyanobacterium Synechocystis sp. PCC 6803 and Arabidopsis thaliana chloroplasts. DOI: 10.1007/s00294-002-0309-8 ; PMID: 12185496
- Transcriptome analysis of sulfur depletion in Arabidopsis thaliana: interlacing of biosynthetic pathways provides response specificity. DOI: 10.1046/j.1365-313x.2003.01657.x ; PMID: 12609038
- New insights into the respiratory chain of plant mitochondria. Supercomplexes and a unique composition of complex II. DOI: 10.1104/pp.103.024620 ; PMID: 12970493
- Inactivation of the chloroplast ATP synthase gamma subunit results in high non-photochemical fluorescence quenching and altered nuclear gene expression in Arabidopsis thaliana. DOI: 10.1074/jbc.M308435200 ; PMID: 14576160
- Experimental analysis of the Arabidopsis mitochondrial proteome highlights signaling and regulatory components, provides assessment of targeting prediction programs, and indicates plant-specific mitochondrial proteins. DOI: 10.1105/tpc.016055 ; PMID: 14671022
- A transcriptomic and proteomic characterization of the Arabidopsis mitochondrial protein import apparatus and its response to mitochondrial dysfunction. DOI: 10.1104/pp.103.033910 ; PMID: 14730085
- Identification of plant glutaredoxin targets. DOI: 10.1089/ars.2005.7.919 ; PMID: 15998247
- Differential expression of the Arabidopsis cytochrome c genes Cytc-1 and Cytc-2. and meristem-specific expression of the Cytc-1 gene. DOI: 10.1104/pp.105.065920 ; PMID: 16113211
- The early dark-response in Arabidopsis thaliana revealed by cDNA microarray analysis. DOI: 10.1007/s11103-005-4211-x ; PMID: 16514558
- Mapping the Arabidopsis organelle proteome. DOI: 10.1073/pnas.0506958103 ; PMID: 16618929
- Resolving and identifying protein components of plant mitochondrial respiratory complexes using three dimensions of gel electrophoresis. DOI: 10.1021/pr700595p ; PMID: 18189341
- Arabidopsis PPR40 connects abiotic stress responses to mitochondrial electron transport. DOI: 10.1104/pp.107.111260 ; PMID: 18305213
- Systems analysis of seed filling in Arabidopsis: using general linear modeling to assess concordance of transcript and protein expression. DOI: 10.1104/pp.109.152413 ; PMID: 20118269
- Evidence for interactions between the mitochondrial import apparatus and respiratory chain complexes via Tim21-like proteins in Arabidopsis. DOI: 10.3389/fpls.2014.00082 ; PMID: 24653731
- Plant-Specific Preprotein and Amino Acid Transporter Proteins Are Required for tRNA Import into Mitochondria. DOI: 10.1104/pp.16.01519 ; PMID: 27789739
- Experimental analysis of the Arabidopsis mitochondrial proteome highlights signaling and regulatory components, provides assessment of targeting prediction programs, and indicates plant-specific mitochondrial proteins. DOI: 10.1105/tpc.016055 ; PMID: 14671022
- The hydrophobic proteome of mitochondrial membranes from Arabidopsis cell suspensions. DOI: 10.1016/j.phytochem.2004.03.028 ; PMID: 15276431
- Mapping the Arabidopsis organelle proteome. DOI: 10.1073/pnas.0506958103 ; PMID: 16618929
- A proteomics dissection of Arabidopsis thaliana vacuoles isolated from cell culture. DOI: 10.1074/mcp.M600250-MCP200 ; PMID: 17151019
- Resolving and identifying protein components of plant mitochondrial respiratory complexes using three dimensions of gel electrophoresis. DOI: 10.1021/pr700595p ; PMID: 18189341
Gene Resources
- UniProt: A0A654F7S8
- EMBL: CACRSJ010000106, LR881468
- AlphaFoldDB: A0A654F7S8
- EnsemblPlants: AT3G16480.1
- Gramene: AT3G16480.1
- KEGG: ath:AT3G16480
- Orthologous matrix: QFQSCTA
- ExpressionAtlas: AT3G16480
- InterPro: IPR001431, IPR007863, IPR011249
- PANTHER: PTHR11851, PTHR11851:SF194
- SUPFAM: SSF63411
- PROSITE: PS00143
- Gene3D: 3.30.830.10
- SWISS-MODEL: A0A654F7S8
Sequences
cDNA Sequence
- >AT3G16480.1
GGCCAAGACTATTATATCATATGGGCCTATCAATGTAATTAGAAGCAATTGCCCGATCCAATAACCTTAATTAGGAAAAAAAATCGTTCCCTTCTCTCGTTTCTTTTCAGCTCTGACTCGGCCTCTATCTCTCTCCCGTCGTCAGCCACATTCACCGGTACTCATCTGACCAAGCTAGGGTTTCGCAGTCATCATCATGTACCGTACGGCAGCTTCTCGAGCCAAGGCCCTTAAGGGCATTCTAAACCACAATTTTCGAGCTTCTCGTTATGCAAGTTCTAGTGCTGTTGCAACGAGCTCTTCTTCCTCCAGCTGGCTAAGTGGAGGCTACTCTAGTTCACTTCCTTCTATGAACATTCCCTTGGCTGGTGTCTCTCTTCCACCACCACTCTCTGACCATGTTGAGCCTAGCAAACTTAAGACCACTACTCTTCCAAATGGTCTGACTATAGCCACTGAGATGTCTCCGAATCCAGCAGCTTCCATTGGTTTATACGTTGACTGTGGTTCTATTTATGAGACTCCTCAATTCCGTGGAGCGACGCACTTGCTTGAAAGGATGGCATTCAAGAGTACATTGAACAGAAGCCATTTTCGCCTTGTAAGGGAAATAGAGGCTATTGGAGGTAATACTTCAGCTTCTGCATCCCGAGAGCAGATGGGTTACACAATTGATGCTCTCAAAACCTATGTTCCCGAAATGGTTGAAGTGCTTATTGATAGTGTGAGGAACCCTGCTTTTTTGGATTGGGAAGTGAATGAAGAGCTCCGAAAGGTGAAAGTAGAGATAGGAGAATTCGCAACGAATCCAATGGGTTTTCTTTTGGAGGCAGTTCATTCTGCTGGTTACTCTGGCGCATTGGCAAATCCATTGTATGCACCTGAATCTGCAATTACTGGATTGACTGGGGAGGTCTTGGAGAATTTTGTTTTTGAGAATTACACTGCTTCACGAATGGTCCTAGCAGCTAGTGGAGTTGATCATGAAGAACTTCTAAAAGTGGTTGAGCCATTACTATCTGACCTCCCTAATGTACCCCGACCTGCGGAGCCAAAGTCTCAATATGTCGGTGGAGATTTCCGTCAACATACGGGTGGAGAGGCTACACATTTTGCGCTTGCTTTTGAAGTGCCAGGATGGAATAACGAGAAGGAAGCTATCATTGCAACTGTTCTTCAGATGCTTATGGGAGGAGGTGGCTCATTTTCTGCGGGAGGCCCTGGAAAAGGAATGCACTCTTGGCTCTATCTTCGCCTTTTGAACCAACATCAGCAGTTTCAATCATGCACTGCATTCACTAGCGTCTTTAACAATACCGGATTGTTTGGAATCTATGGTTGCACGAGTCCTGAATTTGCTTCACAGGGAATTGAATTAGTAGCTAGTGAAATGAACGCTGTTGCTGATGGAAAAGTTAATCAGAAACATCTTGATCGCGCCAAAGCAGCAACAAAATCTGCGATTCTGATGAATCTGGAATCTCGGATGATTGCAGCAGAAGACATTGGTAGACAGATTCTTACTTACGGAGAGAGGAAACCAGTAGACCAATTCTTGAAGACAGTAGACCAACTTACCTTAAAGGACATTGCAGATTTCACTAGCAAGGTTATCACAAAGCCTTTGACAATGGCAACTTTCGGAGACGTGTTGAATGTTCCAAGCTATGACTCCGTAAGCAAAAGATTTCGCTGAAGAGTGAAGAAGTAAAAAAGATCTTTTTACATCATAAGATAGAGTTGGGACCTGTAGAATAAAGATAGCCTTTTTTTTGGAGATCCAACCAAATTTTTTGTTTCATCTATCTCTCAAGTTTCTGACCTAAGATAAGTCCATGAAAATGGTGACAAATTACGCCCATGTCTCCAATTTCGTTGTTGCGTATTTCTTCTCTTCGGTTAGTGAATAATGATTGATACGTTTACCAACTTTTTTCAGCTTCAATTTTTAAATTTCTTTCTTGTTAAAGAATGCTGGCAAACATAGGCATTAAAGATAGATAGAAG
CDS Sequence
- >AT3G16480.1
ATGTACCGTACGGCAGCTTCTCGAGCCAAGGCCCTTAAGGGCATTCTAAACCACAATTTTCGAGCTTCTCGTTATGCAAGTTCTAGTGCTGTTGCAACGAGCTCTTCTTCCTCCAGCTGGCTAAGTGGAGGCTACTCTAGTTCACTTCCTTCTATGAACATTCCCTTGGCTGGTGTCTCTCTTCCACCACCACTCTCTGACCATGTTGAGCCTAGCAAACTTAAGACCACTACTCTTCCAAATGGTCTGACTATAGCCACTGAGATGTCTCCGAATCCAGCAGCTTCCATTGGTTTATACGTTGACTGTGGTTCTATTTATGAGACTCCTCAATTCCGTGGAGCGACGCACTTGCTTGAAAGGATGGCATTCAAGAGTACATTGAACAGAAGCCATTTTCGCCTTGTAAGGGAAATAGAGGCTATTGGAGGTAATACTTCAGCTTCTGCATCCCGAGAGCAGATGGGTTACACAATTGATGCTCTCAAAACCTATGTTCCCGAAATGGTTGAAGTGCTTATTGATAGTGTGAGGAACCCTGCTTTTTTGGATTGGGAAGTGAATGAAGAGCTCCGAAAGGTGAAAGTAGAGATAGGAGAATTCGCAACGAATCCAATGGGTTTTCTTTTGGAGGCAGTTCATTCTGCTGGTTACTCTGGCGCATTGGCAAATCCATTGTATGCACCTGAATCTGCAATTACTGGATTGACTGGGGAGGTCTTGGAGAATTTTGTTTTTGAGAATTACACTGCTTCACGAATGGTCCTAGCAGCTAGTGGAGTTGATCATGAAGAACTTCTAAAAGTGGTTGAGCCATTACTATCTGACCTCCCTAATGTACCCCGACCTGCGGAGCCAAAGTCTCAATATGTCGGTGGAGATTTCCGTCAACATACGGGTGGAGAGGCTACACATTTTGCGCTTGCTTTTGAAGTGCCAGGATGGAATAACGAGAAGGAAGCTATCATTGCAACTGTTCTTCAGATGCTTATGGGAGGAGGTGGCTCATTTTCTGCGGGAGGCCCTGGAAAAGGAATGCACTCTTGGCTCTATCTTCGCCTTTTGAACCAACATCAGCAGTTTCAATCATGCACTGCATTCACTAGCGTCTTTAACAATACCGGATTGTTTGGAATCTATGGTTGCACGAGTCCTGAATTTGCTTCACAGGGAATTGAATTAGTAGCTAGTGAAATGAACGCTGTTGCTGATGGAAAAGTTAATCAGAAACATCTTGATCGCGCCAAAGCAGCAACAAAATCTGCGATTCTGATGAATCTGGAATCTCGGATGATTGCAGCAGAAGACATTGGTAGACAGATTCTTACTTACGGAGAGAGGAAACCAGTAGACCAATTCTTGAAGACAGTAGACCAACTTACCTTAAAGGACATTGCAGATTTCACTAGCAAGGTTATCACAAAGCCTTTGACAATGGCAACTTTCGGAGACGTGTTGAATGTTCCAAGCTATGACTCCGTAAGCAAAAGATTTCGCTGA
Protein Sequence
- >AT3G16480.1
MYRTAASRAKALKGILNHNFRASRYASSSAVATSSSSSSWLSGGYSSSLPSMNIPLAGVSLPPPLSDHVEPSKLKTTTLPNGLTIATEMSPNPAASIGLYVDCGSIYETPQFRGATHLLERMAFKSTLNRSHFRLVREIEAIGGNTSASASREQMGYTIDALKTYVPEMVEVLIDSVRNPAFLDWEVNEELRKVKVEIGEFATNPMGFLLEAVHSAGYSGALANPLYAPESAITGLTGEVLENFVFENYTASRMVLAASGVDHEELLKVVEPLLSDLPNVPRPAEPKSQYVGGDFRQHTGGEATHFALAFEVPGWNNEKEAIIATVLQMLMGGGGSFSAGGPGKGMHSWLYLRLLNQHQQFQSCTAFTSVFNNTGLFGIYGCTSPEFASQGIELVASEMNAVADGKVNQKHLDRAKAATKSAILMNLESRMIAAEDIGRQILTYGERKPVDQFLKTVDQLTLKDIADFTSKVITKPLTMATFGDVLNVPSYDSVSKRFR