Information report for AT3G16280
Gene Details
|
|
Functional Descriptions
- GO:0098542 — acts upstream of or within — defense response to other organism
- GO:0071396 — acts upstream of or within — cellular response to lipid
- GO:0005634 — located in — nucleus
- GO:0019761 — acts upstream of or within — glucosinolate biosynthetic process
- GO:0006355 — involved in — regulation of DNA-templated transcription
- GO:0006355 — acts upstream of or within — regulation of DNA-templated transcription
- GO:0003700 — enables — DNA-binding transcription factor activity
- GO:1901605 — acts upstream of or within — alpha-amino acid metabolic process
- GO:2000026 — acts upstream of or within — regulation of multicellular organismal development
- GO:0009620 — acts upstream of or within — response to fungus
- GO:0010035 — acts upstream of or within — response to inorganic substance
- GO:0000976 — enables — transcription cis-regulatory region binding
- GO:0009888 — acts upstream of or within — tissue development
- GO:0009611 — acts upstream of or within — response to wounding
Functional Keywords
Literature and News
- Arabidopsis transcription factors: genome-wide comparative analysis among eukaryotes. DOI: 10.1126/science.290.5499.2105 ; PMID: 11118137
- Cell cycle-regulated gene expression in Arabidopsis. DOI: 10.1074/jbc.M207570200 ; PMID: 12169696
- Inactivation of the chloroplast ATP synthase gamma subunit results in high non-photochemical fluorescence quenching and altered nuclear gene expression in Arabidopsis thaliana. DOI: 10.1074/jbc.M308435200 ; PMID: 14576160
- Genomic and physiological studies of early cryptochrome 1 action demonstrate roles for auxin and gibberellin in the control of hypocotyl growth by blue light. DOI: 10.1046/j.1365-313x.2003.01870.x ; PMID: 14535885
- Arabidopsis transcription factors: genome-wide comparative analysis among eukaryotes. DOI: 10.1126/science.290.5499.2105 ; PMID: 11118137
- Genome-wide analysis of the ERF gene family in Arabidopsis and rice. DOI: 10.1104/pp.105.073783 ; PMID: 16407444
Gene Resources
- UniProt: A0A1I9LT94
- EMBL: CP002686
- AlphaFoldDB: A0A1I9LT94
- EnsemblPlants: AT3G16280.2
- Gramene: AT3G16280.2
- ExpressionAtlas: AT3G16280
- InterPro: IPR001471, IPR016177, IPR036955
- PANTHER: PTHR31985, PTHR31985:SF313
- SUPFAM: SSF54171
- PROSITE: PS51032
- Gene3D: 3.30.730.10
- SWISS-MODEL: A0A1I9LT94
- Conserved Domain Database: cd00018
Homologs
- Brassica napus GSBRNA2T00044730001, GSBRNA2T00104993001
- Brassica oleracea XP_013584412.1
- Brassica rapa XP_009146154.1
- Citrus sinensis orange1.1g038538m
- Glycine max Glyma.07G017300.1.p
- Gossypium arboreum Cotton_A_38038_BGI-A2_v1.0
- Gossypium hirsutum Gh_D03G0578, Gh_A02G1153, Gh_D05G1260
- Malus domestica MDP0000174352
- Raphanus raphanistrum RrC1286_p2
Sequences
cDNA Sequence
- >AT3G16280.2
TGTTTTTATACTAAAAGAAAGTTTATTAAAAAAAAAAACCTCAGAATCAAAGCTCTCTCATTAGCACTTTAGCAGTCAGTCTATAAATACATGTCTCACATCCACACAAAAAGAAGAAGTAAGTATCAAACGAGAGTACAAAAGATGACGTCACTCAACAGCTCTGCATCACCAACATCATCGTCATCAGACCAATCTGATGCAACTACTACAACAAGCACCCACTTGTCTGAAGAAGAAGCTCCACCCAGAAACAACAACACAAGAAAGAGAAGGAGAGATTCTTCTTCTGCTTCTTCATCTTCTTCAATGCAACATCCTGTTTACAGAGGTGTGCGGATGAGAAGTTGGGGCAAATGGGTCTCCGAGATCCGACAACCTCGTAAGAAAACTCGTATTTGGCTCGGCACTTTTGTCACCGCTGATATGGCTGCTCGTGCTCACGACGTCGCTGCTCTCACCATCAAAGGCTCCTCCGCCGTCTTAAATTTCCCTGAGCTTGCTTCTCTCTTCCCTCGTCCGGCGTCATCATCGCCGCATGATATCCAGACAGCCGCCGCAGAAGCCGCCGCCATGGTGGTCGAAGAAAAACTGTTAGAGAAGGATGAGGCTCCGGAGGCCCCACCTTCGTCGGAATCTTCTTACGTGGCGGCGGAGTCAGAGGATGAGGAGAGGTTGGAGAAAATTGTGGAGCTGCCTAACATTGAAGAAGGAAGTTATGACGAGAGTGTGACATCACGTGCTGATCTGGCTTATTCTGAGCCGTTCGATTGTTGGGTGTATCCTCCGGTTATGGATTTTTATGAAGAAATATCGGAGTTTAATTTCGTGGAATTGTGGAGCTTTAATCACTAATTAAGTTAGGAAAGTGCATTATATTGCAATATTGCATCATAGATAACATTTGTATTTCTTTTCTTTTTGTACGGATACGTAGCATATGCTACTATACTAGGGCTAGTGTACCAAATATTGTAAAATATACTTATTAATATTTATGTAAATGTGTAATATATATAACATACAATTATTGTAAGTTTGGAAATTGGAAACTATCGTTA - >AT3G16280.1
TGTTTTTATACTAAAAGAAAGTTTATTAAAAAAAAAAACCTCAGAATCAAAGCTCTCTCATTAGCACTTTAGCAGTCAGTCTATAAATACATGTCTCACATCCACACAAAAAGAAGAAGTAAGTATCAAACGAGAGTACAAAAGATGACGTCACTCAACAGCTCTGCATCACCAACATCATCGTCATCAGACCAATCTGATGCAACTACTACAACAAGCACCCACTTGTCTGAAGAAGAAGCTCCACCCAGAAACAACAACACAAGAAAGAGAAGGAGAGATTCTTCTTCTGCTTCTTCATCTTCTTCAATGCAACATCCTGTTTACAGAGGTGTGCGGATGAGAAGTTGGGGCAAATGGGTCTCCGAGATCCGACAACCTCGTAAGAAAACTCGTATTTGGCTCGGCACTTTTGTCACCGCTGATATGGCTGCTCGTGCTCACGACGTCGCTGCTCTCACCATCAAAGGCTCCTCCGCCGTCTTAAATTTCCCTGAGCTTGCTTCTCTCTTCCCTCGTCCGGCGTCATCATCGCCGCATGATATCCAGACAGCCGCCGCAGAAGCCGCCGCCATGGTGGTCGAAGAAAAACTGTTAGAGAAGGATGAGGCTCCGGAGGCCCCACCTTCGTCGGAATCTTCTTACGTGGCGGCGGAGTCAGAGGATGAGGAGAGGTTGGAGAAAATTGTGGAGCTGCCTAACATTGAAGAAGGAAGTTATGACGAGAGTGTGACATCACGTGCTGATCTGGCTTATTCTGAGCCGTTCGATTGTTGGGTGTATCCTCCGGTTATGGATTTTTATGAAGAAATATCGGAGTTTAATTTCGTGGAATTGTGGAGCTTTAATCACTAATTAAGTTAGGAAAGTGCATTATATTGCAATATTGCATCATAGATAACATTTGTATTTCTTTTCTTTTTGTACGGATACGTAGCATATGCTACTATACTAGGGCTAGTGTACCAAATATTGTAAAATATACTTATTAATATTTATGTAAATGTGTAATATATATAACATACAATTATTGTAAGTTTGGAAATTGGAAACTATCGTTA
CDS Sequence
- >AT3G16280.2
ATGTCTCACATCCACACAAAAAGAAGAAGTAAGTATCAAACGAGAGTACAAAAGATGACGTCACTCAACAGCTCTGCATCACCAACATCATCGTCATCAGACCAATCTGATGCAACTACTACAACAAGCACCCACTTGTCTGAAGAAGAAGCTCCACCCAGAAACAACAACACAAGAAAGAGAAGGAGAGATTCTTCTTCTGCTTCTTCATCTTCTTCAATGCAACATCCTGTTTACAGAGGTGTGCGGATGAGAAGTTGGGGCAAATGGGTCTCCGAGATCCGACAACCTCGTAAGAAAACTCGTATTTGGCTCGGCACTTTTGTCACCGCTGATATGGCTGCTCGTGCTCACGACGTCGCTGCTCTCACCATCAAAGGCTCCTCCGCCGTCTTAAATTTCCCTGAGCTTGCTTCTCTCTTCCCTCGTCCGGCGTCATCATCGCCGCATGATATCCAGACAGCCGCCGCAGAAGCCGCCGCCATGGTGGTCGAAGAAAAACTGTTAGAGAAGGATGAGGCTCCGGAGGCCCCACCTTCGTCGGAATCTTCTTACGTGGCGGCGGAGTCAGAGGATGAGGAGAGGTTGGAGAAAATTGTGGAGCTGCCTAACATTGAAGAAGGAAGTTATGACGAGAGTGTGACATCACGTGCTGATCTGGCTTATTCTGAGCCGTTCGATTGTTGGGTGTATCCTCCGGTTATGGATTTTTATGAAGAAATATCGGAGTTTAATTTCGTGGAATTGTGGAGCTTTAATCACTAA - >AT3G16280.1
ATGTCTCACATCCACACAAAAAGAAGAAGTAAGTATCAAACGAGAGTACAAAAGATGACGTCACTCAACAGCTCTGCATCACCAACATCATCGTCATCAGACCAATCTGATGCAACTACTACAACAAGCACCCACTTGTCTGAAGAAGAAGCTCCACCCAGAAACAACAACACAAGAAAGAGAAGGAGAGATTCTTCTTCTGCTTCTTCATCTTCTTCAATGCAACATCCTGTTTACAGAGGTGTGCGGATGAGAAGTTGGGGCAAATGGGTCTCCGAGATCCGACAACCTCGTAAGAAAACTCGTATTTGGCTCGGCACTTTTGTCACCGCTGATATGGCTGCTCGTGCTCACGACGTCGCTGCTCTCACCATCAAAGGCTCCTCCGCCGTCTTAAATTTCCCTGAGCTTGCTTCTCTCTTCCCTCGTCCGGCGTCATCATCGCCGCATGATATCCAGACAGCCGCCGCAGAAGCCGCCGCCATGGTGGTCGAAGAAAAACTGTTAGAGAAGGATGAGGCTCCGGAGGCCCCACCTTCGTCGGAATCTTCTTACGTGGCGGCGGAGTCAGAGGATGAGGAGAGGTTGGAGAAAATTGTGGAGCTGCCTAACATTGAAGAAGGAAGTTATGACGAGAGTGTGACATCACGTGCTGATCTGGCTTATTCTGAGCCGTTCGATTGTTGGGTGTATCCTCCGGTTATGGATTTTTATGAAGAAATATCGGAGTTTAATTTCGTGGAATTGTGGAGCTTTAATCACTAA
Protein Sequence
- >AT3G16280.2
MSHIHTKRRSKYQTRVQKMTSLNSSASPTSSSSDQSDATTTTSTHLSEEEAPPRNNNTRKRRRDSSSASSSSSMQHPVYRGVRMRSWGKWVSEIRQPRKKTRIWLGTFVTADMAARAHDVAALTIKGSSAVLNFPELASLFPRPASSSPHDIQTAAAEAAAMVVEEKLLEKDEAPEAPPSSESSYVAAESEDEERLEKIVELPNIEEGSYDESVTSRADLAYSEPFDCWVYPPVMDFYEEISEFNFVELWSFNH - >AT3G16280.1
MSHIHTKRRSKYQTRVQKMTSLNSSASPTSSSSDQSDATTTTSTHLSEEEAPPRNNNTRKRRRDSSSASSSSSMQHPVYRGVRMRSWGKWVSEIRQPRKKTRIWLGTFVTADMAARAHDVAALTIKGSSAVLNFPELASLFPRPASSSPHDIQTAAAEAAAMVVEEKLLEKDEAPEAPPSSESSYVAAESEDEERLEKIVELPNIEEGSYDESVTSRADLAYSEPFDCWVYPPVMDFYEEISEFNFVELWSFNH