Information report for AT3G16240
Gene Details
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Functional Descriptions
- GO:0009941 — located in — chloroplast envelope
- GO:0015204 — enables — urea transmembrane transporter activity
- GO:0055085 — acts upstream of or within — transmembrane transport
- GO:0006833 — acts upstream of or within — water transport
- GO:0015250 — enables — water channel activity
- GO:0000325 — located in — plant-type vacuole
- GO:0005886 — located in — plasma membrane
- GO:0016020 — is active in — membrane
- GO:0042807 — located in — central vacuole
- GO:0008519 — enables — ammonium transmembrane transporter activity
- GO:0006833 — involved in — water transport
- GO:0005794 — located in — Golgi apparatus
- GO:0009705 — located in — plant-type vacuole membrane
- GO:0009506 — located in — plasmodesma
- GO:0015840 — acts upstream of or within — urea transport
- GO:0015200 — enables — methylammonium transmembrane transporter activity
- GO:0009505 — located in — plant-type cell wall
- GO:0042802 — enables — identical protein binding
- GO:0000326 — located in — protein storage vacuole
Functional Keywords
Literature and News
- An abundant TIP expressed in mature highly vacuolated cells. DOI: 10.1046/j.1365-313x.2000.00648.x ; PMID: 10652153
- Characterization of closely related delta-TIP genes encoding aquaporins which are differentially expressed in sunflower roots upon water deprivation through exposure to air. DOI: 10.1023/a:1026488605778 ; PMID: 10394956
- Characterization of a new vacuolar membrane aquaporin sensitive to mercury at a unique site. DOI: 10.1105/tpc.8.4.587 ; PMID: 8624437
- The complete set of genes encoding major intrinsic proteins in Arabidopsis provides a framework for a new nomenclature for major intrinsic proteins in plants. DOI: 10.1104/pp.126.4.1358 ; PMID: 11500536
- Geminating pollen has tubular vacuoles, displays highly dynamic vacuole biogenesis, and requires VACUOLESS1 for proper function. DOI: 10.1104/pp.103.037382 ; PMID: 14988481
- Early effects of salinity on water transport in Arabidopsis roots. Molecular and cellular features of aquaporin expression. DOI: 10.1104/pp.105.065029 ; PMID: 16183846
- Arabidopsis cell wall proteome defined using multidimensional protein identification technology. DOI: 10.1002/pmic.200500046 ; PMID: 16287169
- Fluorescent reporter proteins for the tonoplast and the vacuolar lumen identify a single vacuolar compartment in Arabidopsis cells. DOI: 10.1104/pp.107.103945 ; PMID: 17905861
- Global analysis of Arabidopsis gene expression uncovers a complex array of changes impacting pathogen response and cell cycle during geminivirus infection. DOI: 10.1104/pp.108.121038 ; PMID: 18650403
- In vivo imaging of the tonoplast intrinsic protein family in Arabidopsis roots. DOI: 10.1186/1471-2229-9-133 ; PMID: 19922653
- The deubiquitinating enzyme AMSH3 is required for intracellular trafficking and vacuole biogenesis in Arabidopsis thaliana. DOI: 10.1105/tpc.110.075952 ; PMID: 20543027
- Mapping of tonoplast intrinsic proteins in maturing and germinating Arabidopsis seeds reveals dual localization of embryonic TIPs to the tonoplast and plasma membrane. DOI: 10.1093/mp/ssq051 ; PMID: 20833734
- Differentiation of Arabidopsis guard cells: analysis of the networks incorporating the basic helix-loop-helix transcription factor, FAMA. DOI: 10.1104/pp.110.167718 ; PMID: 21245191
- A small molecule inhibitor partitions two distinct pathways for trafficking of tonoplast intrinsic proteins in Arabidopsis. DOI: 10.1371/journal.pone.0044735 ; PMID: 22957103
- Endogenous Arabidopsis messenger RNAs transported to distant tissues. DOI: 10.1038/nplants.2015.25 ; PMID: 27247031
- Comparative Analysis of Arabidopsis Ecotypes Reveals a Role for Brassinosteroids in Root Hydrotropism. DOI: 10.1104/pp.17.01563 ; PMID: 29439211
- Proteomics of the chloroplast envelope membranes from Arabidopsis thaliana. DOI: 10.1074/mcp.M300030-MCP200 ; PMID: 12766230
- The Arabidopsis thaliana chloroplast proteome reveals pathway abundance and novel protein functions. DOI: 10.1016/j.cub.2004.02.039 ; PMID: 15028209
- Identification of new intrinsic proteins in Arabidopsis plasma membrane proteome. DOI: 10.1074/mcp.M400001-MCP200 ; PMID: 15060130
- The vegetative vacuole proteome of Arabidopsis thaliana reveals predicted and unexpected proteins. DOI: 10.1105/tpc.104.027078 ; PMID: 15539469
- Arabidopsis cell wall proteome defined using multidimensional protein identification technology. DOI: 10.1002/pmic.200500046 ; PMID: 16287169
- A proteomics dissection of Arabidopsis thaliana vacuoles isolated from cell culture. DOI: 10.1074/mcp.M600250-MCP200 ; PMID: 17151019
- A high content in lipid-modified peripheral proteins and integral receptor kinases features in the arabidopsis plasma membrane proteome. DOI: 10.1074/mcp.M700099-MCP200 ; PMID: 17644812
Gene Resources
- UniProt: A0A5S9XCT4
- EMBL: CACRSJ010000106, CACSHJ010000089, LR881468
- AlphaFoldDB: A0A5S9XCT4
- EnsemblPlants: AT3G16240.1
- Gramene: AT3G16240.1
- KEGG: ath:AT3G16240
- Orthologous matrix: IACMAEI
- ExpressionAtlas: AT3G16240
- InterPro: IPR000425, IPR022357, IPR023271
- PANTHER: PTHR45665, PTHR45665:SF9
- SUPFAM: SSF81338
- PROSITE: PS00221
- Gene3D: 1.20.1080.10
- OrthoDB: A0A5S9XCT4
- SWISS-MODEL: A0A5S9XCT4
- Conserved Domain Database: cd00333
Homologs
Sequences
cDNA Sequence
- >AT3G16240.1
CCACAGAAACTCATTAAATAGTATTTTTTTATAAAACTTAAGTTATATGCATGGATACATGAACGATACTCCTATATAAAGAGAACAGCATTCAAAAGGTCTTATCATCTTCTTCACTAAACAAAAAAAAACCCTTCAAAACATTTCCTTATTCTTTCTTCTTCATCTACAACAATGGCTGGAGTTGCCTTTGGTTCCTTTGATGATTCATTCAGCTTGGCTTCTCTAAGAGCTTACCTCGCTGAGTTCATCTCCACTTTACTCTTTGTTTTCGCTGGTGTTGGCTCTGCCATTGCCTACGCAAAGCTGACGTCGGACGCTGCTCTTGATACACCGGGACTAGTGGCCATCGCGGTTTGTCATGGTTTTGCTCTCTTCGTGGCCGTTGCAATCGGAGCCAACATCTCCGGTGGCCATGTGAACCCAGCCGTCACTTTTGGTCTTGCTGTCGGTGGTCAAATCACAGTCATCACCGGAGTTTTCTACTGGATCGCTCAGCTTCTCGGCTCCACCGCCGCTTGTTTCCTCCTTAAATACGTCACCGGTGGATTGGCGGTTCCAACCCACAGCGTTGCGGCTGGACTAGGATCGATAGAAGGAGTAGTGATGGAGATCATCATCACCTTCGCTTTGGTCTACACTGTCTACGCCACCGCCGCTGATCCCAAGAAGGGTTCTCTCGGAACCATCGCTCCTCTCGCCATTGGTCTTATCGTTGGTGCCAACATCCTCGCCGCCGGTCCATTCTCCGGTGGATCCATGAACCCAGCACGTTCCTTTGGACCAGCTGTTGCTGCCGGAGACTTCTCTGGTCACTGGGTCTACTGGGTTGGACCACTCATCGGTGGTGGACTTGCCGGACTTATCTACGGAAATGTCTTCATGGGTTCTTCCGAACATGTTCCTCTTGCTTCTGCTGATTTCTAAGGAAACAAGTGATGATTCTTGATTCATGTTTCTGTGTTTGGTTACTTTGCCTCGATCTTTCTTGTTTTGTTTGGAGTTTGGTCCGGTTTCGTTGTAATTTTTATCCAATTTGTATGAATATTATTTAATGGATGGCTGTTTTGGTTATAAATTAACTAATGGATGTATGAATATATAGTTTCACCTAAATAGGTAGTTGTAATGTTGTATAGCTAATTATCGATCCATATATATAAAAAATAGATCGTTACAATTTTATGAT
CDS Sequence
- >AT3G16240.1
ATGGCTGGAGTTGCCTTTGGTTCCTTTGATGATTCATTCAGCTTGGCTTCTCTAAGAGCTTACCTCGCTGAGTTCATCTCCACTTTACTCTTTGTTTTCGCTGGTGTTGGCTCTGCCATTGCCTACGCAAAGCTGACGTCGGACGCTGCTCTTGATACACCGGGACTAGTGGCCATCGCGGTTTGTCATGGTTTTGCTCTCTTCGTGGCCGTTGCAATCGGAGCCAACATCTCCGGTGGCCATGTGAACCCAGCCGTCACTTTTGGTCTTGCTGTCGGTGGTCAAATCACAGTCATCACCGGAGTTTTCTACTGGATCGCTCAGCTTCTCGGCTCCACCGCCGCTTGTTTCCTCCTTAAATACGTCACCGGTGGATTGGCGGTTCCAACCCACAGCGTTGCGGCTGGACTAGGATCGATAGAAGGAGTAGTGATGGAGATCATCATCACCTTCGCTTTGGTCTACACTGTCTACGCCACCGCCGCTGATCCCAAGAAGGGTTCTCTCGGAACCATCGCTCCTCTCGCCATTGGTCTTATCGTTGGTGCCAACATCCTCGCCGCCGGTCCATTCTCCGGTGGATCCATGAACCCAGCACGTTCCTTTGGACCAGCTGTTGCTGCCGGAGACTTCTCTGGTCACTGGGTCTACTGGGTTGGACCACTCATCGGTGGTGGACTTGCCGGACTTATCTACGGAAATGTCTTCATGGGTTCTTCCGAACATGTTCCTCTTGCTTCTGCTGATTTCTAA
Protein Sequence
- >AT3G16240.1
MAGVAFGSFDDSFSLASLRAYLAEFISTLLFVFAGVGSAIAYAKLTSDAALDTPGLVAIAVCHGFALFVAVAIGANISGGHVNPAVTFGLAVGGQITVITGVFYWIAQLLGSTAACFLLKYVTGGLAVPTHSVAAGLGSIEGVVMEIIITFALVYTVYATAADPKKGSLGTIAPLAIGLIVGANILAAGPFSGGSMNPARSFGPAVAAGDFSGHWVYWVGPLIGGGLAGLIYGNVFMGSSEHVPLASADF